RNA–Protein interactions for RNA: ENST00000440048.1

VARS-217, Transcript of valyl-tRNA synthetase, humanhuman

TSL 1 (best)

Gene VARS, Length 804 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-217ENST00000440048 NAA10P41227 235 aaPredicted RBP19.99■□□□□ 0.79
VARS-217ENST00000440048 CX3CR1P49238 355 aa19.99■□□□□ 0.79
VARS-217ENST00000440048 ZNF92Q03936 586 aa19.99■□□□□ 0.79
VARS-217ENST00000440048 SLC3A1Q07837 685 aa19.99■□□□□ 0.79
VARS-217ENST00000440048 GLYATL3Q5SZD4 288 aa19.99■□□□□ 0.79
VARS-217ENST00000440048 SLX4IPQ5VYV7 408 aa19.99■□□□□ 0.79
VARS-217ENST00000440048 ZNF454Q8N9F8 522 aa19.99■□□□□ 0.79
VARS-217ENST00000440048 PKP2Q99959 881 aa19.99■□□□□ 0.79
VARS-217ENST00000440048 PRRG3Q9BZD7 231 aa19.99■□□□□ 0.79
VARS-217ENST00000440048 TMEM100Q9NV29 134 aa19.99■□□□□ 0.79
VARS-217ENST00000440048 DCAF16Q9NXF7 216 aa19.99■□□□□ 0.79
VARS-217ENST00000440048 A0A1B0GWJ7 208 aa19.98■□□□□ 0.79
VARS-217ENST00000440048 H3BNX3 289 aa19.98■□□□□ 0.79
VARS-217ENST00000440048 M0R129 80 aa19.98■□□□□ 0.79
VARS-217ENST00000440048 HSD11B1P28845 292 aa19.98■□□□□ 0.79
VARS-217ENST00000440048 RBMXP38159 391 aaKnown RBP19.98■□□□□ 0.79
VARS-217ENST00000440048 OPRL1P41146 370 aa19.98■□□□□ 0.79
VARS-217ENST00000440048 C12orf73Q69YU5 71 aa19.98■□□□□ 0.79
VARS-217ENST00000440048 RHOUQ7L0Q8 258 aa19.98■□□□□ 0.79
VARS-217ENST00000440048 THEM6Q8WUY1 208 aa19.98■□□□□ 0.79
VARS-217ENST00000440048 TEAD3Q99594 435 aa19.98■□□□□ 0.79
VARS-217ENST00000440048 REPIN1Q9BWE0 567 aaKnown RBP19.98■□□□□ 0.79
VARS-217ENST00000440048 TMEM106BQ9NUM4 274 aa19.98■□□□□ 0.79
VARS-217ENST00000440048 ENOPH1Q9UHY7 261 aa19.98■□□□□ 0.79
VARS-217ENST00000440048 KLHDC2Q9Y2U9 406 aa19.98■□□□□ 0.79
VARS-217ENST00000440048 CCDC182A6NF36 153 aa19.97■□□□□ 0.79
VARS-217ENST00000440048 CD300LBA8K4G0 201 aa19.97■□□□□ 0.79
VARS-217ENST00000440048 FAM157AC9JC47 383 aa19.97■□□□□ 0.79
VARS-217ENST00000440048 LYNP07948 512 aa19.97■□□□□ 0.79
VARS-217ENST00000440048 EFNB1P98172 346 aa19.97■□□□□ 0.79
VARS-217ENST00000440048 CHRFAM7AQ494W8 412 aa19.97■□□□□ 0.79
VARS-217ENST00000440048 ZFP1Q6P2D0 407 aa19.97■□□□□ 0.79
VARS-217ENST00000440048 TCEANCQ8N8B7 351 aa19.97■□□□□ 0.79
VARS-217ENST00000440048 SPRYD4Q8WW59 207 aaPredicted RBP19.97■□□□□ 0.79
VARS-217ENST00000440048 MEGF10Q96KG7 1140 aa19.97■□□□□ 0.79
VARS-217ENST00000440048 OSBPL10Q9BXB5 764 aa19.97■□□□□ 0.79
VARS-217ENST00000440048 CDC42EP3Q9UKI2 254 aa19.97■□□□□ 0.79
VARS-217ENST00000440048 PPP1R3CQ9UQK1 317 aa19.97■□□□□ 0.79
VARS-217ENST00000440048 SVEP1Q4LDE5 3571 aa19.96■□□□□ 0.79
VARS-217ENST00000440048 B4DSR2 109 aa19.96■□□□□ 0.79
VARS-217ENST00000440048 F5H5P2 479 aa19.96■□□□□ 0.79
VARS-217ENST00000440048 APOC1P02654 83 aa19.96■□□□□ 0.79
VARS-217ENST00000440048 HLA-DPB1P04440 258 aa19.96■□□□□ 0.79
VARS-217ENST00000440048 ANXA2P07355 339 aaKnown RBP19.96■□□□□ 0.79
VARS-217ENST00000440048 H2BFMP0C1H6 154 aa19.96■□□□□ 0.79
VARS-217ENST00000440048 SLC16A9Q7RTY1 509 aa19.96■□□□□ 0.79
VARS-217ENST00000440048 PRSS45Q7RTY3 260 aa19.96■□□□□ 0.79
VARS-217ENST00000440048 BCDIN3DQ7Z5W3 292 aaKnown RBP19.96■□□□□ 0.79
VARS-217ENST00000440048 PEG10Q86TG7 708 aaKnown RBP19.96■□□□□ 0.79
VARS-217ENST00000440048 ZNF665Q9H7R5 613 aa19.96■□□□□ 0.79
VARS-217ENST00000440048 GCM1Q9NP62 436 aa19.96■□□□□ 0.79
VARS-217ENST00000440048 DNAJC27Q9NZQ0 273 aa19.96■□□□□ 0.79
VARS-217ENST00000440048 NPTNQ9Y639 398 aa19.96■□□□□ 0.79
VARS-217ENST00000440048 GGT3PA6NGU5 568 aa19.95■□□□□ 0.78
VARS-217ENST00000440048 TBX1O43435 398 aa19.95■□□□□ 0.78
VARS-217ENST00000440048 XRCC2O43543 280 aa19.95■□□□□ 0.78
VARS-217ENST00000440048 IFNA2P01563 188 aa19.95■□□□□ 0.78
VARS-217ENST00000440048 ALOX5APP20292 161 aa19.95■□□□□ 0.78
VARS-217ENST00000440048 POLR2IP36954 125 aaKnown RBP19.95■□□□□ 0.78
VARS-217ENST00000440048 SRP9P49458 86 aaKnown RBP19.95■□□□□ 0.78
VARS-217ENST00000440048 HCCSP53701 268 aa19.95■□□□□ 0.78
VARS-217ENST00000440048 ZNF121P58317 390 aaPredicted RBP19.95■□□□□ 0.78
VARS-217ENST00000440048 LCN1P1Q5VSP4 162 aa19.95■□□□□ 0.78
VARS-217ENST00000440048 TMEM163Q8TC26 289 aa19.95■□□□□ 0.78
VARS-217ENST00000440048 SPSB4Q96A44 273 aa19.95■□□□□ 0.78
VARS-217ENST00000440048 RBM4BQ9BQ04 359 aaKnown RBP19.95■□□□□ 0.78
VARS-217ENST00000440048 BEX2Q9BXY8 128 aa19.95■□□□□ 0.78
VARS-217ENST00000440048 GABARAPL3Q9BY60 117 aa19.95■□□□□ 0.78
VARS-217ENST00000440048 YIPF3Q9GZM5 350 aa19.95■□□□□ 0.78
VARS-217ENST00000440048 SP140LQ9H930 580 aa19.95■□□□□ 0.78
VARS-217ENST00000440048 MRPL3P09001 348 aaKnown RBP19.94■□□□□ 0.78
VARS-217ENST00000440048 AADACL4Q5VUY2 407 aa19.94■□□□□ 0.78
VARS-217ENST00000440048 FAM57BQ71RH2 274 aa19.94■□□□□ 0.78
VARS-217ENST00000440048 HIST2H2ABQ8IUE6 130 aaPredicted RBP19.94■□□□□ 0.78
VARS-217ENST00000440048 SIGLEC11Q96RL6 698 aa19.94■□□□□ 0.78
VARS-217ENST00000440048 IL4I1Q96RQ9 567 aa19.94■□□□□ 0.78
VARS-217ENST00000440048 SHARPINQ9H0F6 387 aa19.94■□□□□ 0.78
VARS-217ENST00000440048 RIBC2Q9H4K1 309 aa19.94■□□□□ 0.78
VARS-217ENST00000440048 OPA3Q9H6K4 179 aa19.94■□□□□ 0.78
VARS-217ENST00000440048 LPAR2Q9HBW0 351 aa19.94■□□□□ 0.78
VARS-217ENST00000440048 BRD7Q9NPI1 651 aa19.94■□□□□ 0.78
VARS-217ENST00000440048 LPAR3Q9UBY5 353 aa19.94■□□□□ 0.78
VARS-217ENST00000440048 LAMP5Q9UJQ1 280 aa19.94■□□□□ 0.78
VARS-217ENST00000440048 IGHV3-64DA0A0J9YX35 117 aa19.93■□□□□ 0.78
VARS-217ENST00000440048 ISPDA4D126 451 aa19.93■□□□□ 0.78
VARS-217ENST00000440048 KIAA1324LA8MWY0 1029 aaPredicted RBP19.93■□□□□ 0.78
VARS-217ENST00000440048 IGHV2-70P01814 119 aa19.93■□□□□ 0.78
VARS-217ENST00000440048 IGHV2-5P01817 119 aa19.93■□□□□ 0.78
VARS-217ENST00000440048 CA6P23280 308 aa19.93■□□□□ 0.78
VARS-217ENST00000440048 MMP16P51512 607 aa19.93■□□□□ 0.78
VARS-217ENST00000440048 DVL1P1P54792 670 aaPredicted RBP19.93■□□□□ 0.78
VARS-217ENST00000440048 TIGD6Q17RP2 521 aa19.93■□□□□ 0.78
VARS-217ENST00000440048 CR1LQ2VPA4 569 aa19.93■□□□□ 0.78
VARS-217ENST00000440048 FAM120AOSQ5T036 256 aa19.93■□□□□ 0.78
VARS-217ENST00000440048 NXNL2Q5VZ03 156 aa19.93■□□□□ 0.78
VARS-217ENST00000440048 LRRN1Q6UXK5 716 aa19.93■□□□□ 0.78
VARS-217ENST00000440048 MEPCEQ7L2J0 689 aaKnown RBP19.93■□□□□ 0.78
VARS-217ENST00000440048 C10orf67Q8IYJ2 551 aa19.93■□□□□ 0.78
VARS-217ENST00000440048 ZNF420Q8TAQ5 688 aaPredicted RBP19.93■□□□□ 0.78
VARS-217ENST00000440048 SGK3Q96BR1 496 aa19.93■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms