RNA–Protein interactions for RNA: ENST00000439008.1

LINC00399-201, long intergenic non-protein coding RNA 399, humanhuman

TSL 2 BASIC

Gene LINC00399, Length 414 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00399-201ENST00000439008 PPP1R3EQ9H7J1 279 aa11.22□□□□□ -0.61
LINC00399-201ENST00000439008 CYSLTR2Q9NS75 346 aa11.22□□□□□ -0.61
LINC00399-201ENST00000439008 DNAJC27Q9NZQ0 273 aa11.22□□□□□ -0.61
LINC00399-201ENST00000439008 CGGBP1Q9UFW8 167 aaPredicted RBP11.22□□□□□ -0.61
LINC00399-201ENST00000439008 N6AMT1Q9Y5N5 214 aa11.22□□□□□ -0.61
LINC00399-201ENST00000439008 WNK2Q9Y3S1 2297 aa11.21□□□□□ -0.61
LINC00399-201ENST00000439008 FBN1P35555 2871 aaKnown RBP11.21□□□□□ -0.61
LINC00399-201ENST00000439008 FAM157AC9JC47 383 aa11.21□□□□□ -0.61
LINC00399-201ENST00000439008 F5H5P2 479 aa11.21□□□□□ -0.61
LINC00399-201ENST00000439008 PSMD9O00233 223 aa11.21□□□□□ -0.61
LINC00399-201ENST00000439008 MAGEB4O15481 346 aaPredicted RBP11.21□□□□□ -0.61
LINC00399-201ENST00000439008 TPD52L2O43399 206 aaKnown RBP11.21□□□□□ -0.61
LINC00399-201ENST00000439008 PMELP40967 661 aa11.21□□□□□ -0.61
LINC00399-201ENST00000439008 ZNF121P58317 390 aaPredicted RBP11.21□□□□□ -0.61
LINC00399-201ENST00000439008 RPS7P62081 194 aaKnown RBP11.21□□□□□ -0.61
LINC00399-201ENST00000439008 TAF13Q15543 124 aa11.21□□□□□ -0.61
LINC00399-201ENST00000439008 CYB5R2Q6BCY4 276 aa11.21□□□□□ -0.61
LINC00399-201ENST00000439008 LRRN1Q6UXK5 716 aa11.21□□□□□ -0.61
LINC00399-201ENST00000439008 SHFQ7M4L6 423 aa11.21□□□□□ -0.61
LINC00399-201ENST00000439008 SLC16A9Q7RTY1 509 aa11.21□□□□□ -0.61
LINC00399-201ENST00000439008 PRIMA1Q86XR5 153 aa11.21□□□□□ -0.61
LINC00399-201ENST00000439008 ZNF283Q8N7M2 679 aa11.21□□□□□ -0.61
LINC00399-201ENST00000439008 THEM6Q8WUY1 208 aa11.21□□□□□ -0.61
LINC00399-201ENST00000439008 CCL17Q92583 94 aa11.21□□□□□ -0.61
LINC00399-201ENST00000439008 SGK3Q96BR1 496 aa11.21□□□□□ -0.61
LINC00399-201ENST00000439008 C1orf159Q96HA4 380 aa11.21□□□□□ -0.61
LINC00399-201ENST00000439008 OR2V2Q96R30 315 aa11.21□□□□□ -0.61
LINC00399-201ENST00000439008 SIGLEC11Q96RL6 698 aa11.21□□□□□ -0.61
LINC00399-201ENST00000439008 TTTY10Q9BZA0 68 aa11.21□□□□□ -0.61
LINC00399-201ENST00000439008 USE1Q9NZ43 259 aa11.21□□□□□ -0.61
LINC00399-201ENST00000439008 WIPI2Q9Y4P8 454 aa11.21□□□□□ -0.61
LINC00399-201ENST00000439008 ATRQ13535 2644 aa11.21□□□□□ -0.62
LINC00399-201ENST00000439008 CD300LBA8K4G0 201 aa11.2□□□□□ -0.62
LINC00399-201ENST00000439008 CRLF1O75462 422 aa11.2□□□□□ -0.62
LINC00399-201ENST00000439008 LYNP07948 512 aa11.2□□□□□ -0.62
LINC00399-201ENST00000439008 CHN2P52757 468 aa11.2□□□□□ -0.62
LINC00399-201ENST00000439008 GRB2P62993 217 aaKnown RBP11.2□□□□□ -0.62
LINC00399-201ENST00000439008 MAB21L1Q13394 359 aa11.2□□□□□ -0.62
LINC00399-201ENST00000439008 ZIK1Q3SY52 487 aaPredicted RBP11.2□□□□□ -0.62
LINC00399-201ENST00000439008 FAM57BQ71RH2 274 aa11.2□□□□□ -0.62
LINC00399-201ENST00000439008 PGAP1Q75T13 922 aa11.2□□□□□ -0.62
LINC00399-201ENST00000439008 MEPCEQ7L2J0 689 aaKnown RBP11.2□□□□□ -0.62
LINC00399-201ENST00000439008 CBR4Q8N4T8 237 aa11.2□□□□□ -0.62
LINC00399-201ENST00000439008 DVL3Q92997 716 aaPredicted RBP11.2□□□□□ -0.62
LINC00399-201ENST00000439008 PPP1R14AQ96A00 147 aa11.2□□□□□ -0.62
LINC00399-201ENST00000439008 SPSB4Q96A44 273 aa11.2□□□□□ -0.62
LINC00399-201ENST00000439008 MEGF10Q96KG7 1140 aa11.2□□□□□ -0.62
LINC00399-201ENST00000439008 LYZL4Q96KX0 146 aa11.2□□□□□ -0.62
LINC00399-201ENST00000439008 ZNF582Q96NG8 517 aaPredicted RBP11.2□□□□□ -0.62
LINC00399-201ENST00000439008 DIRC2Q96SL1 478 aa11.2□□□□□ -0.62
LINC00399-201ENST00000439008 MBOAT4Q96T53 435 aa11.2□□□□□ -0.62
LINC00399-201ENST00000439008 RBM4BQ9BQ04 359 aaKnown RBP11.2□□□□□ -0.62
LINC00399-201ENST00000439008 ADGRL4Q9HBW9 690 aa11.2□□□□□ -0.62
LINC00399-201ENST00000439008 GCM1Q9NP62 436 aa11.2□□□□□ -0.62
LINC00399-201ENST00000439008 BRD7Q9NPI1 651 aa11.2□□□□□ -0.62
LINC00399-201ENST00000439008 AASSQ9UDR5 926 aa11.2□□□□□ -0.62
LINC00399-201ENST00000439008 IL19Q9UHD0 177 aa11.2□□□□□ -0.62
LINC00399-201ENST00000439008 LRP12Q9Y561 859 aa11.2□□□□□ -0.62
LINC00399-201ENST00000439008 LOC100289279A0A1B0GTE1 492 aa11.19□□□□□ -0.62
LINC00399-201ENST00000439008 A8MV72 311 aaPredicted RBP11.19□□□□□ -0.62
LINC00399-201ENST00000439008 APOL3O95236 402 aa11.19□□□□□ -0.62
LINC00399-201ENST00000439008 H2BFMP0C1H6 154 aa11.19□□□□□ -0.62
LINC00399-201ENST00000439008 CA6P23280 308 aa11.19□□□□□ -0.62
LINC00399-201ENST00000439008 GZMKP49863 264 aa11.19□□□□□ -0.62
LINC00399-201ENST00000439008 FAM3AP98173 230 aa11.19□□□□□ -0.62
LINC00399-201ENST00000439008 HFEQ30201 348 aa11.19□□□□□ -0.62
LINC00399-201ENST00000439008 ZMAT1Q5H9K5 638 aa11.19□□□□□ -0.62
LINC00399-201ENST00000439008 NXNL2Q5VZ03 156 aa11.19□□□□□ -0.62
LINC00399-201ENST00000439008 RHOUQ7L0Q8 258 aa11.19□□□□□ -0.62
LINC00399-201ENST00000439008 ZNF771Q7L3S4 317 aaPredicted RBP11.19□□□□□ -0.62
LINC00399-201ENST00000439008 SSX6Q7RTT6 188 aa11.19□□□□□ -0.62
LINC00399-201ENST00000439008 MRPL21Q7Z2W9 205 aaKnown RBP11.19□□□□□ -0.62
LINC00399-201ENST00000439008 PQLC1Q8N2U9 271 aa11.19□□□□□ -0.62
LINC00399-201ENST00000439008 ZNF454Q8N9F8 522 aa11.19□□□□□ -0.62
LINC00399-201ENST00000439008 OR56B2PQ8NGI1 322 aa11.19□□□□□ -0.62
LINC00399-201ENST00000439008 OR13G1Q8NGZ3 307 aa11.19□□□□□ -0.62
LINC00399-201ENST00000439008 ZNF420Q8TAQ5 688 aaPredicted RBP11.19□□□□□ -0.62
LINC00399-201ENST00000439008 EME1Q96AY2 570 aa11.19□□□□□ -0.62
LINC00399-201ENST00000439008 TEX12Q9BXU0 123 aa11.19□□□□□ -0.62
LINC00399-201ENST00000439008 YIPF3Q9GZM5 350 aa11.19□□□□□ -0.62
LINC00399-201ENST00000439008 EGLN1Q9GZT9 426 aa11.19□□□□□ -0.62
LINC00399-201ENST00000439008 DLGAP1O14490 977 aa11.18□□□□□ -0.62
LINC00399-201ENST00000439008 TBX1O43435 398 aa11.18□□□□□ -0.62
LINC00399-201ENST00000439008 TGFAP01135 160 aa11.18□□□□□ -0.62
LINC00399-201ENST00000439008 IGHV2-70P01814 119 aa11.18□□□□□ -0.62
LINC00399-201ENST00000439008 ANXA2P07355 339 aaKnown RBP11.18□□□□□ -0.62
LINC00399-201ENST00000439008 SLC15A1P46059 708 aa11.18□□□□□ -0.62
LINC00399-201ENST00000439008 MMP16P51512 607 aa11.18□□□□□ -0.62
LINC00399-201ENST00000439008 ALDH3A2P51648 485 aa11.18□□□□□ -0.62
LINC00399-201ENST00000439008 CDH15P55291 814 aa11.18□□□□□ -0.62
LINC00399-201ENST00000439008 MALLQ13021 153 aa11.18□□□□□ -0.62
LINC00399-201ENST00000439008 MPPED2Q15777 294 aa11.18□□□□□ -0.62
LINC00399-201ENST00000439008 FAM201AQ5SY85 155 aa11.18□□□□□ -0.62
LINC00399-201ENST00000439008 IL17RELQ6ZVW7 336 aa11.18□□□□□ -0.62
LINC00399-201ENST00000439008 HPS1Q92902 700 aa11.18□□□□□ -0.62
LINC00399-201ENST00000439008 HRASLS5Q96KN8 279 aa11.18□□□□□ -0.62
LINC00399-201ENST00000439008 RAB3IPQ96QF0 476 aaPredicted RBP11.18□□□□□ -0.62
LINC00399-201ENST00000439008 APOL4Q9BPW4 351 aa11.18□□□□□ -0.62
LINC00399-201ENST00000439008 TOR3AQ9H497 397 aa11.18□□□□□ -0.62
LINC00399-201ENST00000439008 TMEM106BQ9NUM4 274 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms