RNA–Protein interactions for RNA: ENST00000434472.6

CD44-210, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,634 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-210ENST00000434472 PMS2CLQ68D20 193 aa9.23□□□□□ -0.93
CD44-210ENST00000434472 LCN10Q6JVE6 187 aa9.23□□□□□ -0.93
CD44-210ENST00000434472 LYG2Q86SG7 212 aa9.23□□□□□ -0.93
CD44-210ENST00000434472 WDR5BQ86VZ2 330 aa9.23□□□□□ -0.93
CD44-210ENST00000434472 COMMD2Q86X83 199 aa9.23□□□□□ -0.93
CD44-210ENST00000434472 ANGPTL5Q86XS5 388 aa9.23□□□□□ -0.93
CD44-210ENST00000434472 UBALD2Q8IYN6 164 aa9.23□□□□□ -0.93
CD44-210ENST00000434472 ZNF101Q8IZC7 436 aa9.23□□□□□ -0.93
CD44-210ENST00000434472 BEST3Q8N1M1 668 aa9.23□□□□□ -0.93
CD44-210ENST00000434472 ZNF283Q8N7M2 679 aa9.23□□□□□ -0.93
CD44-210ENST00000434472 WDSUB1Q8N9V3 476 aa9.23□□□□□ -0.93
CD44-210ENST00000434472 OR5M8Q8NGP6 311 aa9.23□□□□□ -0.93
CD44-210ENST00000434472 OR13C8Q8NGS7 320 aa9.23□□□□□ -0.93
CD44-210ENST00000434472 OR6K3Q8NGY3 331 aa9.23□□□□□ -0.93
CD44-210ENST00000434472 INTS12Q96CB8 462 aaKnown RBP9.23□□□□□ -0.93
CD44-210ENST00000434472 WDR89Q96FK6 387 aaPredicted RBP9.23□□□□□ -0.93
CD44-210ENST00000434472 MYEF2Q9P2K5 600 aaKnown RBP9.23□□□□□ -0.93
CD44-210ENST00000434472 PFDN2Q9UHV9 154 aa9.23□□□□□ -0.93
CD44-210ENST00000434472 PILRBQ9UKJ0 227 aa9.23□□□□□ -0.93
CD44-210ENST00000434472 MRPS28Q9Y2Q9 187 aaKnown RBP9.23□□□□□ -0.93
CD44-210ENST00000434472 NOP16Q9Y3C1 178 aaKnown RBP9.23□□□□□ -0.93
CD44-210ENST00000434472 CHCHD2Q9Y6H1 151 aaPredicted RBP9.23□□□□□ -0.93
CD44-210ENST00000434472 OR14I1A6ND48 311 aa9.23□□□□□ -0.93
CD44-210ENST00000434472 C9J4A7 227 aa9.23□□□□□ -0.93
CD44-210ENST00000434472 IL2RAP01589 272 aa9.23□□□□□ -0.93
CD44-210ENST00000434472 APOC1P02654 83 aa9.23□□□□□ -0.93
CD44-210ENST00000434472 IFNA6P05013 189 aa9.23□□□□□ -0.93
CD44-210ENST00000434472 FCER2P06734 321 aa9.23□□□□□ -0.93
CD44-210ENST00000434472 ZBTB25P24278 435 aa9.23□□□□□ -0.93
CD44-210ENST00000434472 CSNK1A1P48729 337 aa9.23□□□□□ -0.93
CD44-210ENST00000434472 CX3CR1P49238 355 aa9.23□□□□□ -0.93
CD44-210ENST00000434472 ZNF133P52736 654 aaPredicted RBP9.23□□□□□ -0.93
CD44-210ENST00000434472 DSCR4P56555 118 aaPredicted RBP9.23□□□□□ -0.93
CD44-210ENST00000434472 ZNF121P58317 390 aaPredicted RBP9.23□□□□□ -0.93
CD44-210ENST00000434472 LY6G6FQ5SQ64 297 aa9.23□□□□□ -0.93
CD44-210ENST00000434472 CARD17Q5XLA6 110 aa9.23□□□□□ -0.93
CD44-210ENST00000434472 FOXL2NBQ6ZUU3 175 aa9.23□□□□□ -0.93
CD44-210ENST00000434472 ABHD12BQ7Z5M8 362 aaPredicted RBP9.23□□□□□ -0.93
CD44-210ENST00000434472 OR5AS1Q8N127 324 aa9.23□□□□□ -0.93
CD44-210ENST00000434472 OR8B12Q8NGG6 310 aa9.23□□□□□ -0.93
CD44-210ENST00000434472 IFI44Q8TCB0 444 aa9.23□□□□□ -0.93
CD44-210ENST00000434472 TMEM54Q969K7 222 aa9.23□□□□□ -0.93
CD44-210ENST00000434472 URM1Q9BTM9 101 aaKnown RBP9.23□□□□□ -0.93
CD44-210ENST00000434472 ANGPTL4Q9BY76 406 aa9.23□□□□□ -0.93
CD44-210ENST00000434472 TMEM185BQ9H7F4 350 aa9.23□□□□□ -0.93
CD44-210ENST00000434472 ZMAT3Q9HA38 289 aaKnown RBP9.23□□□□□ -0.93
CD44-210ENST00000434472 GPR84Q9NQS5 396 aa9.23□□□□□ -0.93
CD44-210ENST00000434472 OCIAD1Q9NX40 245 aa9.23□□□□□ -0.93
CD44-210ENST00000434472 ZNF224Q9NZL3 707 aa9.23□□□□□ -0.93
CD44-210ENST00000434472 GHRLQ9UBU3 117 aa9.23□□□□□ -0.93
CD44-210ENST00000434472 ANAPC10Q9UM13 185 aa9.23□□□□□ -0.93
CD44-210ENST00000434472 FREM3P0C091 2139 aa9.22□□□□□ -0.93
CD44-210ENST00000434472 IGHV1-45A0A0A0MS14 117 aa9.22□□□□□ -0.93
CD44-210ENST00000434472 WIPF3A6NGB9 483 aa9.22□□□□□ -0.93
CD44-210ENST00000434472 STK17BO94768 372 aa9.22□□□□□ -0.93
CD44-210ENST00000434472 OR2F2O95006 317 aa9.22□□□□□ -0.93
CD44-210ENST00000434472 IGHEP01854 428 aa9.22□□□□□ -0.93
CD44-210ENST00000434472 MGMTP16455 207 aa9.22□□□□□ -0.93
CD44-210ENST00000434472 NAT1P18440 290 aa9.22□□□□□ -0.93
CD44-210ENST00000434472 MSR1P21757 451 aa9.22□□□□□ -0.93
CD44-210ENST00000434472 CDAP32320 146 aa9.22□□□□□ -0.93
CD44-210ENST00000434472 SFTPDP35247 375 aa9.22□□□□□ -0.93
CD44-210ENST00000434472 THBS4P35443 961 aa9.22□□□□□ -0.93
CD44-210ENST00000434472 CLDN17P56750 224 aa9.22□□□□□ -0.93
CD44-210ENST00000434472 CSNK2A1P68400 391 aaPredicted RBP9.22□□□□□ -0.93
CD44-210ENST00000434472 OC90Q02509 493 aaPredicted RBP9.22□□□□□ -0.93
CD44-210ENST00000434472 DHRS2Q13268 280 aa9.22□□□□□ -0.93
CD44-210ENST00000434472 OR2F1Q13607 317 aa9.22□□□□□ -0.93
CD44-210ENST00000434472 ARL6IP1Q15041 203 aa9.22□□□□□ -0.93
CD44-210ENST00000434472 C10orf128Q5T292 105 aa9.22□□□□□ -0.93
CD44-210ENST00000434472 RGS7BPQ6MZT1 257 aaPredicted RBP9.22□□□□□ -0.93
CD44-210ENST00000434472 GLIPR1L1Q6UWM5 242 aa9.22□□□□□ -0.93
CD44-210ENST00000434472 ZNF546Q86UE3 836 aa9.22□□□□□ -0.93
CD44-210ENST00000434472 PNLDC1Q8NA58 520 aaKnown RBP9.22□□□□□ -0.93
CD44-210ENST00000434472 GJC3Q8NFK1 279 aa9.22□□□□□ -0.93
CD44-210ENST00000434472 OR56B1Q8NGI3 324 aa9.22□□□□□ -0.93
CD44-210ENST00000434472 SCGB3A2Q96PL1 93 aa9.22□□□□□ -0.93
CD44-210ENST00000434472 PHB2Q99623 299 aa9.22□□□□□ -0.93
CD44-210ENST00000434472 SELENOIQ9C0D9 397 aa9.22□□□□□ -0.93
CD44-210ENST00000434472 LPAR5Q9H1C0 372 aa9.22□□□□□ -0.93
CD44-210ENST00000434472 PNRC2Q9NPJ4 139 aaKnown RBP9.22□□□□□ -0.93
CD44-210ENST00000434472 ASH2LQ9UBL3 628 aa9.22□□□□□ -0.93
CD44-210ENST00000434472 VSIG4Q9Y279 399 aa9.22□□□□□ -0.93
CD44-210ENST00000434472 KIF26BQ2KJY2 2108 aa9.21□□□□□ -0.93
CD44-210ENST00000434472 TRAV14DV4A0A0A6YYC5 116 aa9.21□□□□□ -0.93
CD44-210ENST00000434472 C9orf170A2RU37 121 aa9.21□□□□□ -0.93
CD44-210ENST00000434472 CCDC85CA6NKD9 419 aa9.21□□□□□ -0.93
CD44-210ENST00000434472 B8ZZF3 427 aa9.21□□□□□ -0.93
CD44-210ENST00000434472 HLA-AP01891 365 aaKnown RBP9.21□□□□□ -0.93
CD44-210ENST00000434472 OPN1LWP04000 364 aa9.21□□□□□ -0.93
CD44-210ENST00000434472 CSN2P05814 226 aa9.21□□□□□ -0.93
CD44-210ENST00000434472 HCKP08631 526 aa9.21□□□□□ -0.93
CD44-210ENST00000434472 PRF1P14222 555 aa9.21□□□□□ -0.93
CD44-210ENST00000434472 ZNF17P17021 662 aa9.21□□□□□ -0.93
CD44-210ENST00000434472 CD96P40200 585 aa9.21□□□□□ -0.93
CD44-210ENST00000434472 CASRP41180 1078 aa9.21□□□□□ -0.93
CD44-210ENST00000434472 SSR4P51571 173 aa9.21□□□□□ -0.93
CD44-210ENST00000434472 ECH1Q13011 328 aa9.21□□□□□ -0.93
CD44-210ENST00000434472 ZNF345Q14585 488 aa9.21□□□□□ -0.93
CD44-210ENST00000434472 INPP5JQ15735 1006 aaPredicted RBP9.21□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms