RNA–Protein interactions for RNA: ENST00000433822.1

COL17A1-204, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 5

Gene COL17A1, Length 537 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-204ENST00000433822 LGALSLQ3ZCW2 172 aaPredicted RBP6.59□□□□□ -1.35
COL17A1-204ENST00000433822 CLVS2Q5SYC1 327 aa6.59□□□□□ -1.35
COL17A1-204ENST00000433822 STPG1Q5TH74 334 aa6.59□□□□□ -1.35
COL17A1-204ENST00000433822 B3GNTL1Q67FW5 361 aaPredicted RBP6.59□□□□□ -1.35
COL17A1-204ENST00000433822 SFRP4Q6FHJ7 346 aaPredicted RBP6.59□□□□□ -1.35
COL17A1-204ENST00000433822 STEAP1BQ6NZ63 245 aa6.59□□□□□ -1.35
COL17A1-204ENST00000433822 GUSBP11Q6P575 273 aa6.59□□□□□ -1.35
COL17A1-204ENST00000433822 KLHL24Q6TFL4 600 aa6.59□□□□□ -1.35
COL17A1-204ENST00000433822 OPN5Q6U736 354 aa6.59□□□□□ -1.35
COL17A1-204ENST00000433822 PGAP1Q75T13 922 aa6.59□□□□□ -1.35
COL17A1-204ENST00000433822 TMPRSS9Q7Z410 1059 aa6.59□□□□□ -1.35
COL17A1-204ENST00000433822 HIST2H2ABQ8IUE6 130 aaPredicted RBP6.59□□□□□ -1.35
COL17A1-204ENST00000433822 NAXDQ8IW45 347 aa6.59□□□□□ -1.35
COL17A1-204ENST00000433822 GTPBP8Q8N3Z3 284 aaPredicted RBP6.59□□□□□ -1.35
COL17A1-204ENST00000433822 SLC22A24Q8N4F4 322 aa6.59□□□□□ -1.35
COL17A1-204ENST00000433822 BMPERQ8N8U9 685 aa6.59□□□□□ -1.35
COL17A1-204ENST00000433822 ZDHHC22Q8N966 263 aa6.59□□□□□ -1.35
COL17A1-204ENST00000433822 DTX3Q8N9I9 347 aa6.59□□□□□ -1.35
COL17A1-204ENST00000433822 SLC38A9Q8NBW4 561 aa6.59□□□□□ -1.35
COL17A1-204ENST00000433822 OR11H4Q8NGC9 324 aa6.59□□□□□ -1.35
COL17A1-204ENST00000433822 OR13C3Q8NGS6 347 aa6.59□□□□□ -1.35
COL17A1-204ENST00000433822 OR2T35Q8NGX2 323 aa6.59□□□□□ -1.35
COL17A1-204ENST00000433822 CEP76Q8TAP6 659 aa6.59□□□□□ -1.35
COL17A1-204ENST00000433822 POC1BQ8TC44 478 aa6.59□□□□□ -1.35
COL17A1-204ENST00000433822 M1APQ8TC57 530 aa6.59□□□□□ -1.35
COL17A1-204ENST00000433822 AQP3Q92482 292 aa6.59□□□□□ -1.35
COL17A1-204ENST00000433822 PNPLA2Q96AD5 504 aa6.59□□□□□ -1.35
COL17A1-204ENST00000433822 INTS12Q96CB8 462 aaKnown RBP6.59□□□□□ -1.35
COL17A1-204ENST00000433822 CCDC74BQ96LY2 380 aa6.59□□□□□ -1.35
COL17A1-204ENST00000433822 CRB3Q9BUF7 120 aa6.59□□□□□ -1.35
COL17A1-204ENST00000433822 KRTAP9-3Q9BYQ3 159 aa6.59□□□□□ -1.35
COL17A1-204ENST00000433822 APMAPQ9HDC9 416 aa6.59□□□□□ -1.35
COL17A1-204ENST00000433822 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP6.59□□□□□ -1.35
COL17A1-204ENST00000433822 TAS2R4Q9NYW5 299 aa6.59□□□□□ -1.35
COL17A1-204ENST00000433822 KLRF1Q9NZS2 232 aa6.59□□□□□ -1.35
COL17A1-204ENST00000433822 PIPOXQ9P0Z9 390 aa6.59□□□□□ -1.35
COL17A1-204ENST00000433822 MGAT4CQ9UBM8 478 aa6.59□□□□□ -1.35
COL17A1-204ENST00000433822 GHRLQ9UBU3 117 aa6.59□□□□□ -1.35
COL17A1-204ENST00000433822 SLC23A1Q9UHI7 598 aa6.59□□□□□ -1.35
COL17A1-204ENST00000433822 GPN3Q9UHW5 284 aaPredicted RBP6.59□□□□□ -1.35
COL17A1-204ENST00000433822 ANAPC10Q9UM13 185 aa6.59□□□□□ -1.35
COL17A1-204ENST00000433822 EMC9Q9Y3B6 208 aa6.59□□□□□ -1.35
COL17A1-204ENST00000433822 PCDHGA5Q9Y5G8 931 aa6.59□□□□□ -1.35
COL17A1-204ENST00000433822 ASCC3Q8N3C0 2202 aaKnown RBP6.58□□□□□ -1.36
COL17A1-204ENST00000433822 ALPK2Q86TB3 2170 aa6.58□□□□□ -1.36
COL17A1-204ENST00000433822 PI4KAP42356 2102 aa6.58□□□□□ -1.36
COL17A1-204ENST00000433822 TRAV18A0A075B6X5 111 aa6.58□□□□□ -1.36
COL17A1-204ENST00000433822 A0A087WV48 116 aa6.58□□□□□ -1.36
COL17A1-204ENST00000433822 CPED1A4D0V7 1026 aa6.58□□□□□ -1.36
COL17A1-204ENST00000433822 DHRS7CA6NNS2 312 aa6.58□□□□□ -1.36
COL17A1-204ENST00000433822 NPIPB6E9PJ23 425 aa6.58□□□□□ -1.36
COL17A1-204ENST00000433822 H0YC42 278 aa6.58□□□□□ -1.36
COL17A1-204ENST00000433822 PYCARD-AS1I3L0S3 204 aa6.58□□□□□ -1.36
COL17A1-204ENST00000433822 M0R233 179 aa6.58□□□□□ -1.36
COL17A1-204ENST00000433822 AKR7A2O43488 359 aa6.58□□□□□ -1.36
COL17A1-204ENST00000433822 GPANK1O95872 356 aa6.58□□□□□ -1.36
COL17A1-204ENST00000433822 IGLV3-1P01715 115 aa6.58□□□□□ -1.36
COL17A1-204ENST00000433822 APOC1P02654 83 aa6.58□□□□□ -1.36
COL17A1-204ENST00000433822 TTRP02766 147 aa6.58□□□□□ -1.36
COL17A1-204ENST00000433822 DCNP07585 359 aaKnown RBP6.58□□□□□ -1.36
COL17A1-204ENST00000433822 ACSM4P0C7M7 580 aa6.58□□□□□ -1.36
COL17A1-204ENST00000433822 TMIGD3P0DMS9 266 aaPredicted RBP6.58□□□□□ -1.36
COL17A1-204ENST00000433822 HLA-DOBP13765 273 aa6.58□□□□□ -1.36
COL17A1-204ENST00000433822 GTF2F2P13984 249 aa6.58□□□□□ -1.36
COL17A1-204ENST00000433822 NAT1P18440 290 aa6.58□□□□□ -1.36
COL17A1-204ENST00000433822 AGTR1P30556 359 aa6.58□□□□□ -1.36
COL17A1-204ENST00000433822 RPS27P42677 84 aaKnown RBP6.58□□□□□ -1.36
COL17A1-204ENST00000433822 OR3A3P47888 321 aa6.58□□□□□ -1.36
COL17A1-204ENST00000433822 SUCLG1P53597 346 aaKnown RBP6.58□□□□□ -1.36
COL17A1-204ENST00000433822 AP2S1P53680 142 aaPredicted RBP6.58□□□□□ -1.36
COL17A1-204ENST00000433822 BIDP55957 195 aa6.58□□□□□ -1.36
COL17A1-204ENST00000433822 GMFBP60983 142 aa6.58□□□□□ -1.36
COL17A1-204ENST00000433822 GRB2P62993 217 aaKnown RBP6.58□□□□□ -1.36
COL17A1-204ENST00000433822 ZFP36L1Q07352 338 aaKnown RBP6.58□□□□□ -1.36
COL17A1-204ENST00000433822 ARL6IP1Q15041 203 aa6.58□□□□□ -1.36
COL17A1-204ENST00000433822 PCOLCEQ15113 449 aa6.58□□□□□ -1.36
COL17A1-204ENST00000433822 GRK1Q15835 563 aa6.58□□□□□ -1.36
COL17A1-204ENST00000433822 ETFDHQ16134 617 aa6.58□□□□□ -1.36
COL17A1-204ENST00000433822 ACTBL2Q562R1 376 aa6.58□□□□□ -1.36
COL17A1-204ENST00000433822 RNASE12Q5GAN4 147 aaKnown RBP6.58□□□□□ -1.36
COL17A1-204ENST00000433822 GLYATL3Q5SZD4 288 aa6.58□□□□□ -1.36
COL17A1-204ENST00000433822 C10orf128Q5T292 105 aa6.58□□□□□ -1.36
COL17A1-204ENST00000433822 NSUN5P2Q63ZY6 315 aa6.58□□□□□ -1.36
COL17A1-204ENST00000433822 POMZP3Q6PJE2 187 aa6.58□□□□□ -1.36
COL17A1-204ENST00000433822 ARSKQ6UWY0 536 aa6.58□□□□□ -1.36
COL17A1-204ENST00000433822 Q6ZTK2 550 aa6.58□□□□□ -1.36
COL17A1-204ENST00000433822 PRSS58Q8IYP2 241 aa6.58□□□□□ -1.36
COL17A1-204ENST00000433822 MAML2Q8IZL2 1156 aaPredicted RBP6.58□□□□□ -1.36
COL17A1-204ENST00000433822 GABRG1Q8N1C3 465 aa6.58□□□□□ -1.36
COL17A1-204ENST00000433822 OR2AK2Q8NG84 335 aa6.58□□□□□ -1.36
COL17A1-204ENST00000433822 OR8H1Q8NGG4 311 aa6.58□□□□□ -1.36
COL17A1-204ENST00000433822 OR5D14Q8NGL3 314 aa6.58□□□□□ -1.36
COL17A1-204ENST00000433822 C11orf40Q8WZ69 217 aa6.58□□□□□ -1.36
COL17A1-204ENST00000433822 PIGKQ92643 395 aa6.58□□□□□ -1.36
COL17A1-204ENST00000433822 FAM46BQ96A09 425 aa6.58□□□□□ -1.36
COL17A1-204ENST00000433822 SLAMF6Q96DU3 332 aa6.58□□□□□ -1.36
COL17A1-204ENST00000433822 SEH1LQ96EE3 360 aa6.58□□□□□ -1.36
COL17A1-204ENST00000433822 IMMP1LQ96LU5 166 aa6.58□□□□□ -1.36
COL17A1-204ENST00000433822 C5orf34Q96MH7 638 aa6.58□□□□□ -1.36
COL17A1-204ENST00000433822 RASL10BQ96S79 203 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms