RNA–Protein interactions for RNA: ENST00000428313.5

C9orf3-206, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best)

Gene C9orf3, Length 2,288 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-206ENST00000428313 PARP12Q9H0J9 701 aaKnown RBP14.39□□□□□ -0.11
C9orf3-206ENST00000428313 MKKSQ9NPJ1 570 aaPredicted RBP14.39□□□□□ -0.11
C9orf3-206ENST00000428313 MRPS18BQ9Y676 258 aaKnown RBP14.39□□□□□ -0.11
C9orf3-206ENST00000428313 DOCK3Q8IZD9 2030 aa14.39□□□□□ -0.11
C9orf3-206ENST00000428313 MEGF11A6BM72 1044 aa14.39□□□□□ -0.11
C9orf3-206ENST00000428313 ZNF217O75362 1048 aa14.39□□□□□ -0.11
C9orf3-206ENST00000428313 VASPP50552 380 aaPredicted RBP14.39□□□□□ -0.11
C9orf3-206ENST00000428313 RAB35Q15286 201 aa14.39□□□□□ -0.11
C9orf3-206ENST00000428313 SLC9A3R2Q15599 337 aa14.39□□□□□ -0.11
C9orf3-206ENST00000428313 ALG10BQ5I7T1 473 aa14.39□□□□□ -0.11
C9orf3-206ENST00000428313 SLC35D2Q76EJ3 337 aa14.39□□□□□ -0.11
C9orf3-206ENST00000428313 LRRC25Q8N386 305 aaPredicted RBP14.39□□□□□ -0.11
C9orf3-206ENST00000428313 GVQW1Q8N7I0 195 aa14.39□□□□□ -0.11
C9orf3-206ENST00000428313 PLPP5Q8NEB5 264 aa14.39□□□□□ -0.11
C9orf3-206ENST00000428313 ANKRD9Q96BM1 317 aaPredicted RBP14.39□□□□□ -0.11
C9orf3-206ENST00000428313 SCGB3A2Q96PL1 93 aa14.39□□□□□ -0.11
C9orf3-206ENST00000428313 C5orf66Q9H5L9 145 aa14.39□□□□□ -0.11
C9orf3-206ENST00000428313 IL36AQ9UHA7 158 aa14.39□□□□□ -0.11
C9orf3-206ENST00000428313 TMEM14AQ9Y6G1 99 aa14.39□□□□□ -0.11
C9orf3-206ENST00000428313 UTRNP46939 3433 aa14.39□□□□□ -0.11
C9orf3-206ENST00000428313 GDI1P31150 447 aa14.38□□□□□ -0.11
C9orf3-206ENST00000428313 MRPS11P82912 194 aaKnown RBP14.38□□□□□ -0.11
C9orf3-206ENST00000428313 SPEM2Q0P670 501 aa14.38□□□□□ -0.11
C9orf3-206ENST00000428313 ANKRD55Q3KP44 614 aa14.38□□□□□ -0.11
C9orf3-206ENST00000428313 SAPCD1Q5SSQ6 148 aa14.38□□□□□ -0.11
C9orf3-206ENST00000428313 ZNF547Q8IVP9 402 aa14.38□□□□□ -0.11
C9orf3-206ENST00000428313 OR52E1Q8NGJ3 308 aa14.38□□□□□ -0.11
C9orf3-206ENST00000428313 OR2M4Q96R27 311 aa14.38□□□□□ -0.11
C9orf3-206ENST00000428313 CMKLR1Q99788 373 aa14.38□□□□□ -0.11
C9orf3-206ENST00000428313 OR11A1Q9GZK7 315 aa14.38□□□□□ -0.11
C9orf3-206ENST00000428313 WDR76Q9H967 626 aa14.38□□□□□ -0.11
C9orf3-206ENST00000428313 Q9N2J8 555 aa14.38□□□□□ -0.11
C9orf3-206ENST00000428313 LSM7Q9UK45 103 aaKnown RBP14.38□□□□□ -0.11
C9orf3-206ENST00000428313 BORCS7-ASMTA0A0B4J1R7 106 aa14.38□□□□□ -0.11
C9orf3-206ENST00000428313 WIPF3A6NGB9 483 aa14.38□□□□□ -0.11
C9orf3-206ENST00000428313 H3BSH0 61 aa14.38□□□□□ -0.11
C9orf3-206ENST00000428313 GRM6O15303 877 aa14.38□□□□□ -0.11
C9orf3-206ENST00000428313 KAT7O95251 611 aa14.38□□□□□ -0.11
C9orf3-206ENST00000428313 ELFN1P0C7U0 828 aa14.38□□□□□ -0.11
C9orf3-206ENST00000428313 ALOX5APP20292 161 aa14.38□□□□□ -0.11
C9orf3-206ENST00000428313 SLC22A12Q96S37 553 aa14.38□□□□□ -0.11
C9orf3-206ENST00000428313 MENTQ9BUN1 341 aa14.38□□□□□ -0.11
C9orf3-206ENST00000428313 GPR87Q9BY21 358 aa14.38□□□□□ -0.11
C9orf3-206ENST00000428313 PLEKHA2Q9HB19 425 aa14.38□□□□□ -0.11
C9orf3-206ENST00000428313 ASCL3Q9NQ33 180 aa14.38□□□□□ -0.11
C9orf3-206ENST00000428313 CREBZFQ9NS37 354 aa14.38□□□□□ -0.11
C9orf3-206ENST00000428313 OR52A1Q9UKL2 312 aa14.38□□□□□ -0.11
C9orf3-206ENST00000428313 RAB22AQ9UL26 194 aa14.38□□□□□ -0.11
C9orf3-206ENST00000428313 GPR34Q9UPC5 381 aa14.38□□□□□ -0.11
C9orf3-206ENST00000428313 DHDHQ9UQ10 334 aa14.38□□□□□ -0.11
C9orf3-206ENST00000428313 A0A087WV62 115 aa14.37□□□□□ -0.11
C9orf3-206ENST00000428313 NPIPA5A0A0B4J1W7 369 aa14.37□□□□□ -0.11
C9orf3-206ENST00000428313 NPIPA7E9PJI5 369 aa14.37□□□□□ -0.11
C9orf3-206ENST00000428313 GALTP07902 379 aa14.37□□□□□ -0.11
C9orf3-206ENST00000428313 NPIPA8P0DM63 369 aa14.37□□□□□ -0.11
C9orf3-206ENST00000428313 APLNRP35414 380 aa14.37□□□□□ -0.11
C9orf3-206ENST00000428313 CDKN2AP42771 156 aaKnown RBP14.37□□□□□ -0.11
C9orf3-206ENST00000428313 GNG10P50151 68 aa14.37□□□□□ -0.11
C9orf3-206ENST00000428313 AFF3P51826 1226 aaKnown RBP14.37□□□□□ -0.11
C9orf3-206ENST00000428313 BPIFB3P59826 476 aa14.37□□□□□ -0.11
C9orf3-206ENST00000428313 PRPS1P60891 318 aa14.37□□□□□ -0.11
C9orf3-206ENST00000428313 RPS4XP62701 263 aaKnown RBP14.37□□□□□ -0.11
C9orf3-206ENST00000428313 SUPT4H1P63272 117 aaKnown RBP14.37□□□□□ -0.11
C9orf3-206ENST00000428313 C1orf100Q5SVJ3 147 aa14.37□□□□□ -0.11
C9orf3-206ENST00000428313 CST9Q5W186 159 aa14.37□□□□□ -0.11
C9orf3-206ENST00000428313 C9orf40Q8IXQ3 194 aa14.37□□□□□ -0.11
C9orf3-206ENST00000428313 C1orf87Q8N0U7 546 aa14.37□□□□□ -0.11
C9orf3-206ENST00000428313 ARL14EPQ8N8R7 260 aaPredicted RBP14.37□□□□□ -0.11
C9orf3-206ENST00000428313 PCSK9Q8NBP7 692 aaKnown RBP14.37□□□□□ -0.11
C9orf3-206ENST00000428313 OR13C9Q8NGT0 318 aa14.37□□□□□ -0.11
C9orf3-206ENST00000428313 FAM210BQ96KR6 192 aa14.37□□□□□ -0.11
C9orf3-206ENST00000428313 JSRP1Q96MG2 331 aaPredicted RBP14.37□□□□□ -0.11
C9orf3-206ENST00000428313 INTS14Q96SY0 518 aa14.37□□□□□ -0.11
C9orf3-206ENST00000428313 CDRT15L2A8MXV6 281 aa14.36□□□□□ -0.11
C9orf3-206ENST00000428313 HSD17B6O14756 317 aa14.36□□□□□ -0.11
C9orf3-206ENST00000428313 DEDDO75618 318 aa14.36□□□□□ -0.11
C9orf3-206ENST00000428313 SCGNO76038 276 aa14.36□□□□□ -0.11
C9orf3-206ENST00000428313 AMBPP02760 352 aa14.36□□□□□ -0.11
C9orf3-206ENST00000428313 NPSP0C0P6 89 aa14.36□□□□□ -0.11
C9orf3-206ENST00000428313 EPHA1P21709 976 aa14.36□□□□□ -0.11
C9orf3-206ENST00000428313 FPR2P25090 351 aa14.36□□□□□ -0.11
C9orf3-206ENST00000428313 DLK1P80370 383 aa14.36□□□□□ -0.11
C9orf3-206ENST00000428313 SLC22A6Q4U2R8 563 aa14.36□□□□□ -0.11
C9orf3-206ENST00000428313 TPGS2Q68CL5 300 aa14.36□□□□□ -0.11
C9orf3-206ENST00000428313 RTN4RL1Q86UN2 441 aaPredicted RBP14.36□□□□□ -0.11
C9orf3-206ENST00000428313 JAGN1Q8N5M9 183 aa14.36□□□□□ -0.11
C9orf3-206ENST00000428313 NAXEQ8NCW5 288 aa14.36□□□□□ -0.11
C9orf3-206ENST00000428313 FAM46BQ96A09 425 aa14.36□□□□□ -0.11
C9orf3-206ENST00000428313 NRTNQ99748 197 aa14.36□□□□□ -0.11
C9orf3-206ENST00000428313 PRRX2Q99811 253 aa14.36□□□□□ -0.11
C9orf3-206ENST00000428313 GSKIPQ9P0R6 139 aa14.36□□□□□ -0.11
C9orf3-206ENST00000428313 SUSD2Q9UGT4 822 aa14.36□□□□□ -0.11
C9orf3-206ENST00000428313 V9GYS6 101 aa14.36□□□□□ -0.11
C9orf3-206ENST00000428313 MASP2O00187 686 aa14.36□□□□□ -0.11
C9orf3-206ENST00000428313 OR5H8P0DN80 308 aa14.36□□□□□ -0.11
C9orf3-206ENST00000428313 BCL6P41182 706 aa14.36□□□□□ -0.11
C9orf3-206ENST00000428313 ERVFC1-1P60608 527 aa14.36□□□□□ -0.11
C9orf3-206ENST00000428313 VAX1Q5SQQ9 334 aa14.36□□□□□ -0.11
C9orf3-206ENST00000428313 TMEM104Q8NE00 496 aa14.36□□□□□ -0.11
C9orf3-206ENST00000428313 OR8G5Q8NG78 346 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms