RNA–Protein interactions for RNA: ENST00000425319.1

HLA-DQB3-203, Transcript of major histocompatibility complex, class II, DQ beta 3, humanhuman

BASIC

Gene HLA-DQB3, Length 356 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB3-203ENST00000425319 BTN2A1Q7KYR7 527 aa10.18□□□□□ -0.78
HLA-DQB3-203ENST00000425319 FAM122BQ7Z309 247 aa10.18□□□□□ -0.78
HLA-DQB3-203ENST00000425319 REC114Q7Z4M0 266 aa10.18□□□□□ -0.78
HLA-DQB3-203ENST00000425319 TSEN54Q7Z6J9 526 aaKnown RBP10.18□□□□□ -0.78
HLA-DQB3-203ENST00000425319 OR8S1Q8NH09 359 aa10.18□□□□□ -0.78
HLA-DQB3-203ENST00000425319 FAM162AQ96A26 154 aa10.18□□□□□ -0.78
HLA-DQB3-203ENST00000425319 DACT3Q96B18 629 aaPredicted RBP10.18□□□□□ -0.78
HLA-DQB3-203ENST00000425319 FAM46AQ96IP4 442 aaKnown RBP10.18□□□□□ -0.78
HLA-DQB3-203ENST00000425319 ERMAPQ96PL5 475 aaPredicted RBP10.18□□□□□ -0.78
HLA-DQB3-203ENST00000425319 HOPXQ9BPY8 73 aaPredicted RBP10.18□□□□□ -0.78
HLA-DQB3-203ENST00000425319 FAM234AQ9H0X4 552 aa10.18□□□□□ -0.78
HLA-DQB3-203ENST00000425319 KCNG2Q9UJ96 466 aa10.18□□□□□ -0.78
HLA-DQB3-203ENST00000425319 B9D1Q9UPM9 204 aa10.18□□□□□ -0.78
HLA-DQB3-203ENST00000425319 ANKRD30BLA7E2S9 258 aa10.17□□□□□ -0.78
HLA-DQB3-203ENST00000425319 CD300LBA8K4G0 201 aa10.17□□□□□ -0.78
HLA-DQB3-203ENST00000425319 C3orf80F5H4A9 247 aa10.17□□□□□ -0.78
HLA-DQB3-203ENST00000425319 J3KTA2 159 aa10.17□□□□□ -0.78
HLA-DQB3-203ENST00000425319 CXCR6O00574 342 aa10.17□□□□□ -0.78
HLA-DQB3-203ENST00000425319 NDUFB3O43676 98 aa10.17□□□□□ -0.78
HLA-DQB3-203ENST00000425319 PTP4A3O75365 173 aa10.17□□□□□ -0.78
HLA-DQB3-203ENST00000425319 SFTPBP07988 381 aa10.17□□□□□ -0.78
HLA-DQB3-203ENST00000425319 ACSM4P0C7M7 580 aa10.17□□□□□ -0.78
HLA-DQB3-203ENST00000425319 SLC6A6P31641 620 aa10.17□□□□□ -0.78
HLA-DQB3-203ENST00000425319 PMELP40967 661 aa10.17□□□□□ -0.78
HLA-DQB3-203ENST00000425319 HIST1H3AP68431 136 aa10.17□□□□□ -0.78
HLA-DQB3-203ENST00000425319 COX10Q12887 443 aa10.17□□□□□ -0.78
HLA-DQB3-203ENST00000425319 KLF10Q13118 480 aa10.17□□□□□ -0.78
HLA-DQB3-203ENST00000425319 SNCBQ16143 134 aa10.17□□□□□ -0.78
HLA-DQB3-203ENST00000425319 CDONQ4KMG0 1287 aa10.17□□□□□ -0.78
HLA-DQB3-203ENST00000425319 HIST2H3PS2Q5TEC6 136 aa10.17□□□□□ -0.78
HLA-DQB3-203ENST00000425319 PRAMEF6Q5VXH4 476 aa10.17□□□□□ -0.78
HLA-DQB3-203ENST00000425319 COLCA1Q6ZS62 124 aa10.17□□□□□ -0.78
HLA-DQB3-203ENST00000425319 HIST2H3AQ71DI3 136 aa10.17□□□□□ -0.78
HLA-DQB3-203ENST00000425319 CBLL1Q75N03 491 aa10.17□□□□□ -0.78
HLA-DQB3-203ENST00000425319 LDLRAD3Q86YD5 345 aa10.17□□□□□ -0.78
HLA-DQB3-203ENST00000425319 ZSCAN4Q8NAM6 433 aaPredicted RBP10.17□□□□□ -0.78
HLA-DQB3-203ENST00000425319 OR5R1Q8NH85 324 aa10.17□□□□□ -0.78
HLA-DQB3-203ENST00000425319 ST8SIA4Q92187 359 aa10.17□□□□□ -0.78
HLA-DQB3-203ENST00000425319 RSRC1Q96IZ7 334 aaKnown RBP10.17□□□□□ -0.78
HLA-DQB3-203ENST00000425319 GPX7Q96SL4 187 aaPredicted RBP10.17□□□□□ -0.78
HLA-DQB3-203ENST00000425319 ADAT1Q9BUB4 502 aaKnown RBP10.17□□□□□ -0.78
HLA-DQB3-203ENST00000425319 C16orf95Q9H693 158 aa10.17□□□□□ -0.78
HLA-DQB3-203ENST00000425319 C1orf123Q9NWV4 160 aa10.17□□□□□ -0.78
HLA-DQB3-203ENST00000425319 MRPL15Q9P015 296 aaKnown RBP10.17□□□□□ -0.78
HLA-DQB3-203ENST00000425319 SIGLEC7Q9Y286 467 aa10.17□□□□□ -0.78
HLA-DQB3-203ENST00000425319 ENPP4Q9Y6X5 453 aa10.17□□□□□ -0.78
HLA-DQB3-203ENST00000425319 A0A1W2PRQ8 180 aa10.16□□□□□ -0.78
HLA-DQB3-203ENST00000425319 C22orf46C9J442 243 aa10.16□□□□□ -0.78
HLA-DQB3-203ENST00000425319 M0R135 149 aa10.16□□□□□ -0.78
HLA-DQB3-203ENST00000425319 BHLHE40O14503 412 aa10.16□□□□□ -0.78
HLA-DQB3-203ENST00000425319 CDC42EP2O14613 210 aa10.16□□□□□ -0.78
HLA-DQB3-203ENST00000425319 DVL1O14640 695 aa10.16□□□□□ -0.78
HLA-DQB3-203ENST00000425319 IDH3BO43837 385 aa10.16□□□□□ -0.78
HLA-DQB3-203ENST00000425319 TXNDC12O95881 172 aa10.16□□□□□ -0.78
HLA-DQB3-203ENST00000425319 APOC1P02654 83 aa10.16□□□□□ -0.78
HLA-DQB3-203ENST00000425319 MUC1P15941 1255 aaPredicted RBP10.16□□□□□ -0.78
HLA-DQB3-203ENST00000425319 RHCEP18577 417 aa10.16□□□□□ -0.78
HLA-DQB3-203ENST00000425319 RBMXP38159 391 aaKnown RBP10.16□□□□□ -0.78
HLA-DQB3-203ENST00000425319 CDKN2AP42771 156 aaKnown RBP10.16□□□□□ -0.78
HLA-DQB3-203ENST00000425319 RELBQ01201 579 aa10.16□□□□□ -0.78
HLA-DQB3-203ENST00000425319 TRAP1Q12931 704 aaKnown RBP10.16□□□□□ -0.78
HLA-DQB3-203ENST00000425319 HNRNPA0Q13151 305 aaKnown RBP10.16□□□□□ -0.78
HLA-DQB3-203ENST00000425319 DGCR6Q14129 220 aa10.16□□□□□ -0.78
HLA-DQB3-203ENST00000425319 LRRC10Q5BKY1 277 aa10.16□□□□□ -0.78
HLA-DQB3-203ENST00000425319 PGBD2Q6P3X8 592 aa10.16□□□□□ -0.78
HLA-DQB3-203ENST00000425319 CORO6Q6QEF8 472 aa10.16□□□□□ -0.78
HLA-DQB3-203ENST00000425319 VTCN1Q7Z7D3 282 aa10.16□□□□□ -0.78
HLA-DQB3-203ENST00000425319 FTMTQ8N4E7 242 aa10.16□□□□□ -0.78
HLA-DQB3-203ENST00000425319 C19orf18Q8NEA5 215 aa10.16□□□□□ -0.78
HLA-DQB3-203ENST00000425319 ZNF799Q96GE5 643 aa10.16□□□□□ -0.78
HLA-DQB3-203ENST00000425319 TBX15Q96SF7 602 aa10.16□□□□□ -0.78
HLA-DQB3-203ENST00000425319 RNPEPL1Q9HAU8 725 aa10.16□□□□□ -0.78
HLA-DQB3-203ENST00000425319 ONECUT1Q9UBC0 465 aa10.16□□□□□ -0.78
HLA-DQB3-203ENST00000425319 CAPN7Q9Y6W3 813 aa10.16□□□□□ -0.78
HLA-DQB3-203ENST00000425319 MEGF8Q7Z7M0 2845 aa10.16□□□□□ -0.78
HLA-DQB3-203ENST00000425319 ZNF816-ZNF321PA0A0X1KG74 233 aa10.15□□□□□ -0.78
HLA-DQB3-203ENST00000425319 A0A1B0GWJ7 208 aa10.15□□□□□ -0.78
HLA-DQB3-203ENST00000425319 SLC22A2O15244 555 aa10.15□□□□□ -0.78
HLA-DQB3-203ENST00000425319 TIPRLO75663 272 aa10.15□□□□□ -0.78
HLA-DQB3-203ENST00000425319 TSPAN9O75954 239 aa10.15□□□□□ -0.78
HLA-DQB3-203ENST00000425319 SERPINA1P01009 418 aa10.15□□□□□ -0.78
HLA-DQB3-203ENST00000425319 IGHV4-59P01825 116 aa10.15□□□□□ -0.78
HLA-DQB3-203ENST00000425319 GYPAP02724 150 aa10.15□□□□□ -0.78
HLA-DQB3-203ENST00000425319 POU1F1P28069 291 aa10.15□□□□□ -0.78
HLA-DQB3-203ENST00000425319 SLC15A1P46059 708 aa10.15□□□□□ -0.78
HLA-DQB3-203ENST00000425319 PROK1P58294 105 aa10.15□□□□□ -0.78
HLA-DQB3-203ENST00000425319 LIPEQ05469 1076 aa10.15□□□□□ -0.78
HLA-DQB3-203ENST00000425319 FHL1Q13642 323 aa10.15□□□□□ -0.78
HLA-DQB3-203ENST00000425319 MPPED2Q15777 294 aa10.15□□□□□ -0.78
HLA-DQB3-203ENST00000425319 RFX4Q33E94 735 aa10.15□□□□□ -0.78
HLA-DQB3-203ENST00000425319 CLEC12AQ5QGZ9 265 aa10.15□□□□□ -0.78
HLA-DQB3-203ENST00000425319 DRAM2Q6UX65 266 aa10.15□□□□□ -0.78
HLA-DQB3-203ENST00000425319 RHOUQ7L0Q8 258 aa10.15□□□□□ -0.78
HLA-DQB3-203ENST00000425319 RP9Q8TA86 221 aaKnown RBP10.15□□□□□ -0.78
HLA-DQB3-203ENST00000425319 SLC7A13Q8TCU3 470 aa10.15□□□□□ -0.78
HLA-DQB3-203ENST00000425319 PPP1R14AQ96A00 147 aa10.15□□□□□ -0.78
HLA-DQB3-203ENST00000425319 MCUR1Q96AQ8 359 aa10.15□□□□□ -0.78
HLA-DQB3-203ENST00000425319 HSH2DQ96JZ2 352 aa10.15□□□□□ -0.78
HLA-DQB3-203ENST00000425319 IFT27Q9BW83 186 aa10.15□□□□□ -0.78
HLA-DQB3-203ENST00000425319 SIRPDQ9H106 197 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms