RNA–Protein interactions for RNA: ENST00000424937.1

PTCHD3P2-201, Transcript of patched domain containing 3 pseudogene 2, humanhuman

BASIC

Gene PTCHD3P2, Length 1,205 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3P2-201ENST00000424937 LOC100289279A0A1B0GTE1 492 aa18.91■□□□□ 0.62
PTCHD3P2-201ENST00000424937 TBX1O43435 398 aa18.91■□□□□ 0.62
PTCHD3P2-201ENST00000424937 H2BFMP0C1H6 154 aa18.91■□□□□ 0.62
PTCHD3P2-201ENST00000424937 TNFRSF1AP19438 455 aa18.91■□□□□ 0.62
PTCHD3P2-201ENST00000424937 POLR2IP36954 125 aaKnown RBP18.91■□□□□ 0.62
PTCHD3P2-201ENST00000424937 OPRL1P41146 370 aa18.91■□□□□ 0.62
PTCHD3P2-201ENST00000424937 ZNF92Q03936 586 aa18.91■□□□□ 0.62
PTCHD3P2-201ENST00000424937 HNRNPA0Q13151 305 aaKnown RBP18.91■□□□□ 0.62
PTCHD3P2-201ENST00000424937 BCDIN3DQ7Z5W3 292 aaKnown RBP18.91■□□□□ 0.62
PTCHD3P2-201ENST00000424937 OR13G1Q8NGZ3 307 aa18.91■□□□□ 0.62
PTCHD3P2-201ENST00000424937 TMEM163Q8TC26 289 aa18.91■□□□□ 0.62
PTCHD3P2-201ENST00000424937 HPS1Q92902 700 aa18.91■□□□□ 0.62
PTCHD3P2-201ENST00000424937 TIMD4Q96H15 378 aa18.91■□□□□ 0.62
PTCHD3P2-201ENST00000424937 IL4I1Q96RQ9 567 aa18.91■□□□□ 0.62
PTCHD3P2-201ENST00000424937 SLC30A2Q9BRI3 323 aa18.91■□□□□ 0.62
PTCHD3P2-201ENST00000424937 IL19Q9UHD0 177 aa18.91■□□□□ 0.62
PTCHD3P2-201ENST00000424937 WIPI2Q9Y4P8 454 aa18.91■□□□□ 0.62
PTCHD3P2-201ENST00000424937 H0YL77 283 aa18.9■□□□□ 0.62
PTCHD3P2-201ENST00000424937 EI24O14681 340 aa18.9■□□□□ 0.62
PTCHD3P2-201ENST00000424937 MLNRO43193 412 aa18.9■□□□□ 0.62
PTCHD3P2-201ENST00000424937 SLC3A1Q07837 685 aa18.9■□□□□ 0.62
PTCHD3P2-201ENST00000424937 FAM166AQ6J272 317 aa18.9■□□□□ 0.62
PTCHD3P2-201ENST00000424937 SLC16A9Q7RTY1 509 aa18.9■□□□□ 0.62
PTCHD3P2-201ENST00000424937 SPRYD4Q8WW59 207 aaPredicted RBP18.9■□□□□ 0.62
PTCHD3P2-201ENST00000424937 TEAD3Q99594 435 aa18.9■□□□□ 0.62
PTCHD3P2-201ENST00000424937 BRD7Q9NPI1 651 aa18.9■□□□□ 0.62
PTCHD3P2-201ENST00000424937 TMEM100Q9NV29 134 aa18.9■□□□□ 0.62
PTCHD3P2-201ENST00000424937 LAMP5Q9UJQ1 280 aa18.9■□□□□ 0.62
PTCHD3P2-201ENST00000424937 GGT3PA6NGU5 568 aa18.89■□□□□ 0.61
PTCHD3P2-201ENST00000424937 XRCC2O43543 280 aa18.89■□□□□ 0.61
PTCHD3P2-201ENST00000424937 TGFAP01135 160 aa18.89■□□□□ 0.61
PTCHD3P2-201ENST00000424937 APOC1P02654 83 aa18.89■□□□□ 0.61
PTCHD3P2-201ENST00000424937 ZNF121P58317 390 aaPredicted RBP18.89■□□□□ 0.61
PTCHD3P2-201ENST00000424937 NXNL2Q5VZ03 156 aa18.89■□□□□ 0.61
PTCHD3P2-201ENST00000424937 FAM57BQ71RH2 274 aa18.89■□□□□ 0.61
PTCHD3P2-201ENST00000424937 HIST2H2ABQ8IUE6 130 aaPredicted RBP18.89■□□□□ 0.61
PTCHD3P2-201ENST00000424937 RAB1CQ92928 201 aa18.89■□□□□ 0.61
PTCHD3P2-201ENST00000424937 CNN2Q99439 309 aaKnown RBP18.89■□□□□ 0.61
PTCHD3P2-201ENST00000424937 REPIN1Q9BWE0 567 aaKnown RBP18.89■□□□□ 0.61
PTCHD3P2-201ENST00000424937 YIPF3Q9GZM5 350 aa18.89■□□□□ 0.61
PTCHD3P2-201ENST00000424937 S100A14Q9HCY8 104 aa18.89■□□□□ 0.61
PTCHD3P2-201ENST00000424937 DCAF16Q9NXF7 216 aa18.89■□□□□ 0.61
PTCHD3P2-201ENST00000424937 H2AFY2Q9P0M6 372 aaPredicted RBP18.89■□□□□ 0.61
PTCHD3P2-201ENST00000424937 KCNS2Q9ULS6 477 aa18.89■□□□□ 0.61
PTCHD3P2-201ENST00000424937 ORC6Q9Y5N6 252 aa18.89■□□□□ 0.61
PTCHD3P2-201ENST00000424937 ISPDA4D126 451 aa18.88■□□□□ 0.61
PTCHD3P2-201ENST00000424937 CD300LBA8K4G0 201 aa18.88■□□□□ 0.61
PTCHD3P2-201ENST00000424937 F5H5P2 479 aa18.88■□□□□ 0.61
PTCHD3P2-201ENST00000424937 HLA-DPB1P04440 258 aa18.88■□□□□ 0.61
PTCHD3P2-201ENST00000424937 ALPLP05186 524 aa18.88■□□□□ 0.61
PTCHD3P2-201ENST00000424937 ALOX5APP20292 161 aa18.88■□□□□ 0.61
PTCHD3P2-201ENST00000424937 HCCSP53701 268 aa18.88■□□□□ 0.61
PTCHD3P2-201ENST00000424937 TIGD6Q17RP2 521 aa18.88■□□□□ 0.61
PTCHD3P2-201ENST00000424937 LRRN1Q6UXK5 716 aa18.88■□□□□ 0.61
PTCHD3P2-201ENST00000424937 RHOUQ7L0Q8 258 aa18.88■□□□□ 0.61
PTCHD3P2-201ENST00000424937 MEPCEQ7L2J0 689 aaKnown RBP18.88■□□□□ 0.61
PTCHD3P2-201ENST00000424937 GID4Q8IVV7 300 aa18.88■□□□□ 0.61
PTCHD3P2-201ENST00000424937 LINC01356Q8N9X3 169 aa18.88■□□□□ 0.61
PTCHD3P2-201ENST00000424937 MEGF10Q96KG7 1140 aa18.88■□□□□ 0.61
PTCHD3P2-201ENST00000424937 TTTY10Q9BZA0 68 aa18.88■□□□□ 0.61
PTCHD3P2-201ENST00000424937 OPA3Q9H6K4 179 aa18.88■□□□□ 0.61
PTCHD3P2-201ENST00000424937 SP140LQ9H930 580 aa18.88■□□□□ 0.61
PTCHD3P2-201ENST00000424937 TMEM106BQ9NUM4 274 aa18.88■□□□□ 0.61
PTCHD3P2-201ENST00000424937 PPP1R3CQ9UQK1 317 aa18.88■□□□□ 0.61
PTCHD3P2-201ENST00000424937 IGHV3-64DA0A0J9YX35 117 aa18.87■□□□□ 0.61
PTCHD3P2-201ENST00000424937 SLC22A31A6NKX4 558 aa18.87■□□□□ 0.61
PTCHD3P2-201ENST00000424937 LMX1BO60663 402 aa18.87■□□□□ 0.61
PTCHD3P2-201ENST00000424937 CRLF1O75462 422 aa18.87■□□□□ 0.61
PTCHD3P2-201ENST00000424937 RBMXP38159 391 aaKnown RBP18.87■□□□□ 0.61
PTCHD3P2-201ENST00000424937 SRP9P49458 86 aaKnown RBP18.87■□□□□ 0.61
PTCHD3P2-201ENST00000424937 CDH15P55291 814 aa18.87■□□□□ 0.61
PTCHD3P2-201ENST00000424937 EFNB1P98172 346 aa18.87■□□□□ 0.61
PTCHD3P2-201ENST00000424937 GFOD2Q3B7J2 385 aa18.87■□□□□ 0.61
PTCHD3P2-201ENST00000424937 AADACL4Q5VUY2 407 aa18.87■□□□□ 0.61
PTCHD3P2-201ENST00000424937 KRT77Q7Z794 578 aa18.87■□□□□ 0.61
PTCHD3P2-201ENST00000424937 PEG10Q86TG7 708 aaKnown RBP18.87■□□□□ 0.61
PTCHD3P2-201ENST00000424937 OR56B2PQ8NGI1 322 aa18.87■□□□□ 0.61
PTCHD3P2-201ENST00000424937 PGAM5Q96HS1 289 aa18.87■□□□□ 0.61
PTCHD3P2-201ENST00000424937 USE1Q9NZ43 259 aa18.87■□□□□ 0.61
PTCHD3P2-201ENST00000424937 LRP12Q9Y561 859 aa18.87■□□□□ 0.61
PTCHD3P2-201ENST00000424937 MMP16P51512 607 aa18.86■□□□□ 0.61
PTCHD3P2-201ENST00000424937 RAD23AP54725 363 aa18.86■□□□□ 0.61
PTCHD3P2-201ENST00000424937 ZNF771Q7L3S4 317 aaPredicted RBP18.86■□□□□ 0.61
PTCHD3P2-201ENST00000424937 PRSS45Q7RTY3 260 aa18.86■□□□□ 0.61
PTCHD3P2-201ENST00000424937 CBR4Q8N4T8 237 aa18.86■□□□□ 0.61
PTCHD3P2-201ENST00000424937 OR52H1Q8NGJ2 320 aa18.86■□□□□ 0.61
PTCHD3P2-201ENST00000424937 REEP6Q96HR9 211 aa18.86■□□□□ 0.61
PTCHD3P2-201ENST00000424937 COPS3Q9UNS2 423 aa18.86■□□□□ 0.61
PTCHD3P2-201ENST00000424937 A0A1B0GWJ7 208 aa18.85■□□□□ 0.61
PTCHD3P2-201ENST00000424937 FAM157AC9JC47 383 aa18.85■□□□□ 0.61
PTCHD3P2-201ENST00000424937 PSMD9O00233 223 aa18.85■□□□□ 0.61
PTCHD3P2-201ENST00000424937 CA6P23280 308 aa18.85■□□□□ 0.61
PTCHD3P2-201ENST00000424937 ALDH3A2P51648 485 aa18.85■□□□□ 0.61
PTCHD3P2-201ENST00000424937 PSMA6P60900 246 aaKnown RBP18.85■□□□□ 0.61
PTCHD3P2-201ENST00000424937 LMO4P61968 165 aa18.85■□□□□ 0.61
PTCHD3P2-201ENST00000424937 OR8G1Q15617 311 aa18.85■□□□□ 0.61
PTCHD3P2-201ENST00000424937 KCTD18Q6PI47 426 aaPredicted RBP18.85■□□□□ 0.61
PTCHD3P2-201ENST00000424937 PQLC1Q8N2U9 271 aa18.85■□□□□ 0.61
PTCHD3P2-201ENST00000424937 FAM81AQ8TBF8 368 aa18.85■□□□□ 0.61
PTCHD3P2-201ENST00000424937 STMN2Q93045 179 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms