RNA–Protein interactions for RNA: ENST00000417448.1

VCP-202, Transcript of valosin containing protein, humanhuman

TSL 3

Gene VCP, Length 722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-202ENST00000417448 STARD10Q9Y365 291 aa15.22■□□□□ 0.03
VCP-202ENST00000417448 ORC6Q9Y5N6 252 aa15.22■□□□□ 0.03
VCP-202ENST00000417448 C5orf63A6NC05 138 aa15.21■□□□□ 0.03
VCP-202ENST00000417448 F5H5K5 113 aa15.21■□□□□ 0.03
VCP-202ENST00000417448 ABHD16AO95870 558 aa15.21■□□□□ 0.03
VCP-202ENST00000417448 ACHEP22303 614 aa15.21■□□□□ 0.03
VCP-202ENST00000417448 RAD52P43351 418 aa15.21■□□□□ 0.03
VCP-202ENST00000417448 ALDH3B1P43353 468 aa15.21■□□□□ 0.03
VCP-202ENST00000417448 PRSS12P56730 875 aa15.21■□□□□ 0.03
VCP-202ENST00000417448 PPP1CBP62140 327 aa15.21■□□□□ 0.03
VCP-202ENST00000417448 TIGD4Q8IY51 512 aa15.21■□□□□ 0.03
VCP-202ENST00000417448 TEX29Q8N6K0 151 aa15.21■□□□□ 0.03
VCP-202ENST00000417448 TEAD3Q99594 435 aa15.21■□□□□ 0.03
VCP-202ENST00000417448 WACQ9BTA9 647 aa15.21■□□□□ 0.03
VCP-202ENST00000417448 TTTY10Q9BZA0 68 aa15.21■□□□□ 0.03
VCP-202ENST00000417448 ZNF275Q9NSD4 429 aaPredicted RBP15.21■□□□□ 0.03
VCP-202ENST00000417448 DDX28Q9NUL7 540 aaKnown RBP15.21■□□□□ 0.03
VCP-202ENST00000417448 DNAJC27Q9NZQ0 273 aa15.21■□□□□ 0.03
VCP-202ENST00000417448 NDRG4Q9ULP0 352 aaKnown RBP15.21■□□□□ 0.03
VCP-202ENST00000417448 N6AMT1Q9Y5N5 214 aa15.21■□□□□ 0.03
VCP-202ENST00000417448 KMT2CQ8NEZ4 4911 aaKnown RBP15.2■□□□□ 0.02
VCP-202ENST00000417448 COX5BP10606 129 aa15.2■□□□□ 0.02
VCP-202ENST00000417448 PEX2P28328 305 aa15.2■□□□□ 0.02
VCP-202ENST00000417448 PRKXP51817 358 aa15.2■□□□□ 0.02
VCP-202ENST00000417448 AADACL4Q5VUY2 407 aa15.2■□□□□ 0.02
VCP-202ENST00000417448 FAM81AQ8TBF8 368 aa15.2■□□□□ 0.02
VCP-202ENST00000417448 SYNPRQ8TBG9 265 aa15.2■□□□□ 0.02
VCP-202ENST00000417448 TAF15Q92804 592 aaKnown RBP eCLIP15.2■□□□□ 0.02
VCP-202ENST00000417448 SLAMF6Q96DU3 332 aa15.2■□□□□ 0.02
VCP-202ENST00000417448 DUX5Q96PT3 197 aa15.2■□□□□ 0.02
VCP-202ENST00000417448 ATF6BQ99941 703 aa15.2■□□□□ 0.02
VCP-202ENST00000417448 MARCH7Q9H992 704 aa15.2■□□□□ 0.02
VCP-202ENST00000417448 PTTG3PQ9NZH4 202 aa15.2■□□□□ 0.02
VCP-202ENST00000417448 DLGAP1O14490 977 aa15.19■□□□□ 0.02
VCP-202ENST00000417448 PRODHO43272 600 aa15.19■□□□□ 0.02
VCP-202ENST00000417448 NCR1O76036 304 aa15.19■□□□□ 0.02
VCP-202ENST00000417448 APOL3O95236 402 aa15.19■□□□□ 0.02
VCP-202ENST00000417448 FSHBP01225 129 aa15.19■□□□□ 0.02
VCP-202ENST00000417448 NAT2P11245 290 aa15.19■□□□□ 0.02
VCP-202ENST00000417448 RAD23AP54725 363 aa15.19■□□□□ 0.02
VCP-202ENST00000417448 HLXQ14774 488 aaPredicted RBP15.19■□□□□ 0.02
VCP-202ENST00000417448 PCK2Q16822 640 aa15.19■□□□□ 0.02
VCP-202ENST00000417448 MEPCEQ7L2J0 689 aaKnown RBP15.19■□□□□ 0.02
VCP-202ENST00000417448 ST7LQ8TDW4 575 aa15.19■□□□□ 0.02
VCP-202ENST00000417448 THEM6Q8WUY1 208 aa15.19■□□□□ 0.02
VCP-202ENST00000417448 RDH5Q92781 318 aa15.19■□□□□ 0.02
VCP-202ENST00000417448 MARS2Q96GW9 593 aaKnown RBP15.19■□□□□ 0.02
VCP-202ENST00000417448 C1orf147Q96MC9 270 aaPredicted RBP15.19■□□□□ 0.02
VCP-202ENST00000417448 COQ7Q99807 217 aa15.19■□□□□ 0.02
VCP-202ENST00000417448 ABHD6Q9BV23 337 aa15.19■□□□□ 0.02
VCP-202ENST00000417448 HDHD2Q9H0R4 259 aa15.19■□□□□ 0.02
VCP-202ENST00000417448 H2AFY2Q9P0M6 372 aaPredicted RBP15.19■□□□□ 0.02
VCP-202ENST00000417448 TAAR3PQ9P1P4 343 aa15.19■□□□□ 0.02
VCP-202ENST00000417448 ENOPH1Q9UHY7 261 aa15.19■□□□□ 0.02
VCP-202ENST00000417448 A0A1W2PPW3 197 aa15.18■□□□□ 0.02
VCP-202ENST00000417448 VSTM5A8MXK1 200 aa15.18■□□□□ 0.02
VCP-202ENST00000417448 E9PQ18 207 aa15.18■□□□□ 0.02
VCP-202ENST00000417448 PSMD9O00233 223 aa15.18■□□□□ 0.02
VCP-202ENST00000417448 PPIHO43447 177 aaKnown RBP15.18■□□□□ 0.02
VCP-202ENST00000417448 PLPP2O43688 288 aa15.18■□□□□ 0.02
VCP-202ENST00000417448 RP2O75695 350 aa15.18■□□□□ 0.02
VCP-202ENST00000417448 ACSM4P0C7M7 580 aa15.18■□□□□ 0.02
VCP-202ENST00000417448 SLC2A1P11166 492 aa15.18■□□□□ 0.02
VCP-202ENST00000417448 RPS23P62266 143 aaKnown RBP15.18■□□□□ 0.02
VCP-202ENST00000417448 TAF13Q15543 124 aa15.18■□□□□ 0.02
VCP-202ENST00000417448 OCLNQ16625 522 aa15.18■□□□□ 0.02
VCP-202ENST00000417448 TUSC1Q2TAM9 212 aa15.18■□□□□ 0.02
VCP-202ENST00000417448 TEX30Q5JUR7 227 aa15.18■□□□□ 0.02
VCP-202ENST00000417448 SLC35D3Q5M8T2 416 aa15.18■□□□□ 0.02
VCP-202ENST00000417448 SHFQ7M4L6 423 aa15.18■□□□□ 0.02
VCP-202ENST00000417448 KLF14Q8TD94 323 aaPredicted RBP15.18■□□□□ 0.02
VCP-202ENST00000417448 IPCEF1Q8WWN9 437 aaPredicted RBP15.18■□□□□ 0.02
VCP-202ENST00000417448 DVL3Q92997 716 aaPredicted RBP15.18■□□□□ 0.02
VCP-202ENST00000417448 BCL2L14Q9BZR8 327 aa15.18■□□□□ 0.02
VCP-202ENST00000417448 ELOVL3Q9HB03 270 aa15.18■□□□□ 0.02
VCP-202ENST00000417448 A0A0G2JMP0 313 aa15.17■□□□□ 0.02
VCP-202ENST00000417448 A0A0X1KG70 313 aa15.17■□□□□ 0.02
VCP-202ENST00000417448 M0R233 179 aa15.17■□□□□ 0.02
VCP-202ENST00000417448 MAGEB4O15481 346 aaPredicted RBP15.17■□□□□ 0.02
VCP-202ENST00000417448 ZNF250P15622 560 aa15.17■□□□□ 0.02
VCP-202ENST00000417448 BLVRAP53004 296 aa15.17■□□□□ 0.02
VCP-202ENST00000417448 TMEM33P57088 247 aa15.17■□□□□ 0.02
VCP-202ENST00000417448 KLF3P57682 345 aaPredicted RBP15.17■□□□□ 0.02
VCP-202ENST00000417448 KRTAP27-1Q3LI81 207 aa15.17■□□□□ 0.02
VCP-202ENST00000417448 ZNF718Q3SXZ3 478 aa15.17■□□□□ 0.02
VCP-202ENST00000417448 SIGLECL1Q8N7X8 197 aa15.17■□□□□ 0.02
VCP-202ENST00000417448 OR4M2Q8NGB6 313 aa15.17■□□□□ 0.02
VCP-202ENST00000417448 NANPQ8TBE9 248 aa15.17■□□□□ 0.02
VCP-202ENST00000417448 HRASLS5Q96KN8 279 aa15.17■□□□□ 0.02
VCP-202ENST00000417448 ZNF582Q96NG8 517 aaPredicted RBP15.17■□□□□ 0.02
VCP-202ENST00000417448 COPS4Q9BT78 406 aa15.17■□□□□ 0.02
VCP-202ENST00000417448 PRRG3Q9BZD7 231 aa15.17■□□□□ 0.02
VCP-202ENST00000417448 ZNF665Q9H7R5 613 aa15.17■□□□□ 0.02
VCP-202ENST00000417448 FAM118AQ9NWS6 357 aa15.17■□□□□ 0.02
VCP-202ENST00000417448 IMPAD1Q9NX62 359 aa15.17■□□□□ 0.02
VCP-202ENST00000417448 OPN4Q9UHM6 478 aa15.17■□□□□ 0.02
VCP-202ENST00000417448 COPS3Q9UNS2 423 aa15.17■□□□□ 0.02
VCP-202ENST00000417448 GMPPBQ9Y5P6 360 aa15.17■□□□□ 0.02
VCP-202ENST00000417448 PRR32B1ATL7 298 aa15.16■□□□□ 0.02
VCP-202ENST00000417448 CLIC3O95833 236 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms