RNA–Protein interactions for RNA: ENST00000415758.1

DDX56-202, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,287 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-202ENST00000415758 BTN2A1Q7KYR7 527 aa12.69□□□□□ -0.38
DDX56-202ENST00000415758 TSEN54Q7Z6J9 526 aaKnown RBP12.69□□□□□ -0.38
DDX56-202ENST00000415758 NAA40Q86UY6 237 aa12.69□□□□□ -0.38
DDX56-202ENST00000415758 SCCPDHQ8NBX0 429 aa12.69□□□□□ -0.38
DDX56-202ENST00000415758 SLC26A10Q8NG04 563 aa12.69□□□□□ -0.38
DDX56-202ENST00000415758 SPRYD4Q8WW59 207 aaPredicted RBP12.69□□□□□ -0.38
DDX56-202ENST00000415758 FAM46AQ96IP4 442 aaKnown RBP12.69□□□□□ -0.38
DDX56-202ENST00000415758 ATF6BQ99941 703 aa12.69□□□□□ -0.38
DDX56-202ENST00000415758 RASSF4Q9H2L5 321 aa12.69□□□□□ -0.38
DDX56-202ENST00000415758 CNTD2Q9H8S5 307 aa12.69□□□□□ -0.38
DDX56-202ENST00000415758 B9D1Q9UPM9 204 aa12.69□□□□□ -0.38
DDX56-202ENST00000415758 KPTNQ9Y664 436 aa12.69□□□□□ -0.38
DDX56-202ENST00000415758 A0A1W2PRQ8 180 aa12.68□□□□□ -0.38
DDX56-202ENST00000415758 CD300LBA8K4G0 201 aa12.68□□□□□ -0.38
DDX56-202ENST00000415758 F5H5K5 113 aa12.68□□□□□ -0.38
DDX56-202ENST00000415758 LHBP01229 141 aa12.68□□□□□ -0.38
DDX56-202ENST00000415758 LCATP04180 440 aa12.68□□□□□ -0.38
DDX56-202ENST00000415758 TGFBR2P37173 567 aa12.68□□□□□ -0.38
DDX56-202ENST00000415758 OMPP47874 163 aa12.68□□□□□ -0.38
DDX56-202ENST00000415758 RPS6KA3P51812 740 aa12.68□□□□□ -0.38
DDX56-202ENST00000415758 KLF10Q13118 480 aa12.68□□□□□ -0.38
DDX56-202ENST00000415758 DGCR6Q14129 220 aa12.68□□□□□ -0.38
DDX56-202ENST00000415758 OR8B8Q15620 311 aa12.68□□□□□ -0.38
DDX56-202ENST00000415758 BEAN1Q3B7T3 259 aa12.68□□□□□ -0.38
DDX56-202ENST00000415758 CFAP77Q6ZQR2 320 aa12.68□□□□□ -0.38
DDX56-202ENST00000415758 CBLL1Q75N03 491 aa12.68□□□□□ -0.38
DDX56-202ENST00000415758 FAM90A1Q86YD7 464 aa12.68□□□□□ -0.38
DDX56-202ENST00000415758 OR6V1Q8N148 313 aa12.68□□□□□ -0.38
DDX56-202ENST00000415758 PITX2Q99697 317 aa12.68□□□□□ -0.38
DDX56-202ENST00000415758 PNRC2Q9NPJ4 139 aaKnown RBP12.68□□□□□ -0.38
DDX56-202ENST00000415758 CYB5R1Q9UHQ9 305 aa12.68□□□□□ -0.38
DDX56-202ENST00000415758 RPUSD1Q9UJJ7 312 aaKnown RBP12.68□□□□□ -0.38
DDX56-202ENST00000415758 VPREB3Q9UKI3 123 aa12.68□□□□□ -0.38
DDX56-202ENST00000415758 AP3M1Q9Y2T2 418 aa12.68□□□□□ -0.38
DDX56-202ENST00000415758 FAM96BQ9Y3D0 163 aa12.68□□□□□ -0.38
DDX56-202ENST00000415758 TET2Q6N021 2002 aaPredicted RBP12.67□□□□□ -0.38
DDX56-202ENST00000415758 ZNF816-ZNF321PA0A0X1KG74 233 aa12.67□□□□□ -0.38
DDX56-202ENST00000415758 A0A1B0GVI7 797 aa12.67□□□□□ -0.38
DDX56-202ENST00000415758 DVL1O14640 695 aa12.67□□□□□ -0.38
DDX56-202ENST00000415758 OR10H3O60404 316 aa12.67□□□□□ -0.38
DDX56-202ENST00000415758 GYPAP02724 150 aa12.67□□□□□ -0.38
DDX56-202ENST00000415758 CSF1P09603 554 aa12.67□□□□□ -0.38
DDX56-202ENST00000415758 GGT2P36268 569 aa12.67□□□□□ -0.38
DDX56-202ENST00000415758 CENPAP49450 140 aa12.67□□□□□ -0.38
DDX56-202ENST00000415758 TRAP1Q12931 704 aaKnown RBP12.67□□□□□ -0.38
DDX56-202ENST00000415758 MAPRE2Q15555 327 aa12.67□□□□□ -0.38
DDX56-202ENST00000415758 TEX36Q5VZQ5 186 aa12.67□□□□□ -0.38
DDX56-202ENST00000415758 DHRS7BQ6IAN0 325 aaPredicted RBP12.67□□□□□ -0.38
DDX56-202ENST00000415758 MRPL21Q7Z2W9 205 aaKnown RBP12.67□□□□□ -0.38
DDX56-202ENST00000415758 ZBTB46Q86UZ6 589 aa12.67□□□□□ -0.38
DDX56-202ENST00000415758 GCSAMQ8N6F7 178 aa12.67□□□□□ -0.38
DDX56-202ENST00000415758 BOLLQ8N9W6 283 aaKnown RBP12.67□□□□□ -0.38
DDX56-202ENST00000415758 SPERTQ8NA61 448 aa12.67□□□□□ -0.38
DDX56-202ENST00000415758 LY6G5BQ8NDX9 201 aa12.67□□□□□ -0.38
DDX56-202ENST00000415758 SRA1Q9HD15 236 aaKnown RBP12.67□□□□□ -0.38
DDX56-202ENST00000415758 CMTM6Q9NX76 183 aa12.67□□□□□ -0.38
DDX56-202ENST00000415758 MRPL15Q9P015 296 aaKnown RBP12.67□□□□□ -0.38
DDX56-202ENST00000415758 ZNRD1Q9P1U0 126 aa12.67□□□□□ -0.38
DDX56-202ENST00000415758 CAB39Q9Y376 341 aaPredicted RBP12.67□□□□□ -0.38
DDX56-202ENST00000415758 ENPP4Q9Y6X5 453 aa12.67□□□□□ -0.38
DDX56-202ENST00000415758 PLXNB1O43157 2135 aa12.67□□□□□ -0.38
DDX56-202ENST00000415758 LOC100653049A0A140TA62 436 aa12.66□□□□□ -0.38
DDX56-202ENST00000415758 KRT34O76011 436 aa12.66□□□□□ -0.38
DDX56-202ENST00000415758 ZNF682O95780 498 aa12.66□□□□□ -0.38
DDX56-202ENST00000415758 FBP1P09467 338 aa12.66□□□□□ -0.38
DDX56-202ENST00000415758 TPTEP56180 551 aa12.66□□□□□ -0.38
DDX56-202ENST00000415758 SLC36A3Q495N2 470 aa12.66□□□□□ -0.38
DDX56-202ENST00000415758 FKBP9P1Q75LS8 142 aa12.66□□□□□ -0.38
DDX56-202ENST00000415758 VMO1Q7Z5L0 202 aa12.66□□□□□ -0.38
DDX56-202ENST00000415758 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.66□□□□□ -0.38
DDX56-202ENST00000415758 CYP4Z1Q86W10 505 aa12.66□□□□□ -0.38
DDX56-202ENST00000415758 LINC00346Q8IVM7 164 aa12.66□□□□□ -0.38
DDX56-202ENST00000415758 GALNT4Q8N4A0 578 aa12.66□□□□□ -0.38
DDX56-202ENST00000415758 OR2AJ1Q8NGZ0 328 aa12.66□□□□□ -0.38
DDX56-202ENST00000415758 RSRC1Q96IZ7 334 aaKnown RBP12.66□□□□□ -0.38
DDX56-202ENST00000415758 ADAT1Q9BUB4 502 aaKnown RBP12.66□□□□□ -0.38
DDX56-202ENST00000415758 TMEM120AQ9BXJ8 343 aa12.66□□□□□ -0.38
DDX56-202ENST00000415758 SAR1AQ9NR31 198 aa12.66□□□□□ -0.38
DDX56-202ENST00000415758 C1orf123Q9NWV4 160 aa12.66□□□□□ -0.38
DDX56-202ENST00000415758 FBLN5Q9UBX5 448 aa12.66□□□□□ -0.38
DDX56-202ENST00000415758 AURKCQ9UQB9 309 aa12.66□□□□□ -0.38
DDX56-202ENST00000415758 G3V4G9 280 aa12.65□□□□□ -0.38
DDX56-202ENST00000415758 CXCR6O00574 342 aa12.65□□□□□ -0.38
DDX56-202ENST00000415758 ARPC3O15145 178 aa12.65□□□□□ -0.38
DDX56-202ENST00000415758 ALX3O95076 343 aa12.65□□□□□ -0.38
DDX56-202ENST00000415758 OPN1MWP04001 364 aa12.65□□□□□ -0.38
DDX56-202ENST00000415758 H1F0P07305 194 aaKnown RBP12.65□□□□□ -0.38
DDX56-202ENST00000415758 OPN1MW2P0DN77 364 aa12.65□□□□□ -0.38
DDX56-202ENST00000415758 OPN1MW3P0DN78 364 aa12.65□□□□□ -0.38
DDX56-202ENST00000415758 OTX1P32242 354 aaPredicted RBP12.65□□□□□ -0.38
DDX56-202ENST00000415758 ZNF92Q03936 586 aa12.65□□□□□ -0.38
DDX56-202ENST00000415758 EGR3Q06889 387 aa12.65□□□□□ -0.38
DDX56-202ENST00000415758 SAMD5Q5TGI4 173 aa12.65□□□□□ -0.38
DDX56-202ENST00000415758 SMARCD3Q6STE5 483 aa12.65□□□□□ -0.38
DDX56-202ENST00000415758 PDZD9Q8IXQ8 264 aa12.65□□□□□ -0.38
DDX56-202ENST00000415758 SLC15A3Q8IY34 581 aa12.65□□□□□ -0.38
DDX56-202ENST00000415758 HSH2DQ96JZ2 352 aa12.65□□□□□ -0.38
DDX56-202ENST00000415758 NMNAT3Q96T66 252 aa12.65□□□□□ -0.38
DDX56-202ENST00000415758 GMPR2Q9P2T1 348 aaKnown RBP12.65□□□□□ -0.38
DDX56-202ENST00000415758 BTBD17A6NE02 478 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms