RNA–Protein interactions for RNA: ENST00000414802.5

CNOT4-204, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 1,687 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-204ENST00000414802 PPP1CBP62140 327 aa11.3□□□□□ -0.6
CNOT4-204ENST00000414802 ALKBH1Q13686 389 aaKnown RBP11.3□□□□□ -0.6
CNOT4-204ENST00000414802 HLXQ14774 488 aaPredicted RBP11.3□□□□□ -0.6
CNOT4-204ENST00000414802 CDK5R1Q15078 307 aa11.3□□□□□ -0.6
CNOT4-204ENST00000414802 MSMPQ1L6U9 139 aa11.3□□□□□ -0.6
CNOT4-204ENST00000414802 ARL9Q6T311 187 aa11.3□□□□□ -0.6
CNOT4-204ENST00000414802 COLCA1Q6ZS62 124 aa11.3□□□□□ -0.6
CNOT4-204ENST00000414802 SLC25A40Q8TBP6 338 aa11.3□□□□□ -0.6
CNOT4-204ENST00000414802 OPALINQ96PE5 141 aa11.3□□□□□ -0.6
CNOT4-204ENST00000414802 PSMG3-AS1Q96PY0 264 aa11.3□□□□□ -0.6
CNOT4-204ENST00000414802 MOB1AQ9H8S9 216 aa11.3□□□□□ -0.6
CNOT4-204ENST00000414802 FRRS1LQ9P0K9 344 aa11.3□□□□□ -0.6
CNOT4-204ENST00000414802 NUFIP1Q9UHK0 495 aaKnown RBP11.3□□□□□ -0.6
CNOT4-204ENST00000414802 SPG11Q96JI7 2443 aa11.29□□□□□ -0.6
CNOT4-204ENST00000414802 P2RY10O00398 339 aa11.29□□□□□ -0.6
CNOT4-204ENST00000414802 ICMTO60725 284 aa11.29□□□□□ -0.6
CNOT4-204ENST00000414802 PCSK6P29122 969 aa11.29□□□□□ -0.6
CNOT4-204ENST00000414802 NKX6-1P78426 367 aaPredicted RBP11.29□□□□□ -0.6
CNOT4-204ENST00000414802 SLC3A1Q07837 685 aa11.29□□□□□ -0.6
CNOT4-204ENST00000414802 TIGD6Q17RP2 521 aa11.29□□□□□ -0.6
CNOT4-204ENST00000414802 UBE2UQ5VVX9 321 aa11.29□□□□□ -0.6
CNOT4-204ENST00000414802 ZNF704Q6ZNC4 412 aaPredicted RBP11.29□□□□□ -0.6
CNOT4-204ENST00000414802 COMMD2Q86X83 199 aa11.29□□□□□ -0.6
CNOT4-204ENST00000414802 RDH10Q8IZV5 341 aa11.29□□□□□ -0.6
CNOT4-204ENST00000414802 OR51E1Q8TCB6 317 aa11.29□□□□□ -0.6
CNOT4-204ENST00000414802 LYZL4Q96KX0 146 aa11.29□□□□□ -0.6
CNOT4-204ENST00000414802 PDCD1LG2Q9BQ51 273 aa11.29□□□□□ -0.6
CNOT4-204ENST00000414802 MRPS26Q9BYN8 205 aaKnown RBP11.29□□□□□ -0.6
CNOT4-204ENST00000414802 OR2J1Q9GZK6 312 aa11.29□□□□□ -0.6
CNOT4-204ENST00000414802 OR10A2Q9H208 303 aa11.29□□□□□ -0.6
CNOT4-204ENST00000414802 TBCCD1Q9NVR7 557 aa11.29□□□□□ -0.6
CNOT4-204ENST00000414802 PLEKHB1Q9UF11 243 aaPredicted RBP11.29□□□□□ -0.6
CNOT4-204ENST00000414802 KCNN3Q9UGI6 736 aa11.29□□□□□ -0.6
CNOT4-204ENST00000414802 CELSR2Q9HCU4 2923 aa11.28□□□□□ -0.6
CNOT4-204ENST00000414802 TRBV2A0A0J9YWF9 115 aa11.28□□□□□ -0.6
CNOT4-204ENST00000414802 TRIM64CA6NLI5 447 aa11.28□□□□□ -0.6
CNOT4-204ENST00000414802 OR4C45A6NMZ5 311 aa11.28□□□□□ -0.6
CNOT4-204ENST00000414802 THBS4P35443 961 aa11.28□□□□□ -0.6
CNOT4-204ENST00000414802 MPV17P39210 176 aa11.28□□□□□ -0.6
CNOT4-204ENST00000414802 TGM4P49221 684 aa11.28□□□□□ -0.6
CNOT4-204ENST00000414802 ZNF92Q03936 586 aa11.28□□□□□ -0.6
CNOT4-204ENST00000414802 DAZAP2Q15038 168 aaPredicted RBP11.28□□□□□ -0.6
CNOT4-204ENST00000414802 TSTQ16762 297 aaKnown RBP11.28□□□□□ -0.6
CNOT4-204ENST00000414802 LIPKQ5VXJ0 399 aa11.28□□□□□ -0.6
CNOT4-204ENST00000414802 FDX2Q6P4F2 183 aa11.28□□□□□ -0.6
CNOT4-204ENST00000414802 RPL22L1Q6P5R6 122 aaKnown RBP11.28□□□□□ -0.6
CNOT4-204ENST00000414802 ELMOD2Q8IZ81 293 aa11.28□□□□□ -0.6
CNOT4-204ENST00000414802 OR13C5Q8NGS8 318 aa11.28□□□□□ -0.6
CNOT4-204ENST00000414802 OR10AC1Q8NH08 325 aa11.28□□□□□ -0.6
CNOT4-204ENST00000414802 REEP6Q96HR9 211 aa11.28□□□□□ -0.6
CNOT4-204ENST00000414802 MGLLQ99685 303 aa11.28□□□□□ -0.6
CNOT4-204ENST00000414802 TMEM204Q9BSN7 226 aa11.28□□□□□ -0.6
CNOT4-204ENST00000414802 SLC24A3Q9HC58 644 aa11.28□□□□□ -0.6
CNOT4-204ENST00000414802 LOC107986453A0A1B0GWG9 222 aa11.27□□□□□ -0.6
CNOT4-204ENST00000414802 E7EQL1 145 aa11.27□□□□□ -0.6
CNOT4-204ENST00000414802 ATE1O95260 518 aa11.27□□□□□ -0.6
CNOT4-204ENST00000414802 CELP19835 753 aa11.27□□□□□ -0.6
CNOT4-204ENST00000414802 RAD52P43351 418 aa11.27□□□□□ -0.6
CNOT4-204ENST00000414802 GP2P55259 537 aaKnown RBP11.27□□□□□ -0.6
CNOT4-204ENST00000414802 TAS2R43P59537 309 aa11.27□□□□□ -0.6
CNOT4-204ENST00000414802 MRPL28Q13084 256 aaKnown RBP11.27□□□□□ -0.6
CNOT4-204ENST00000414802 GK2Q14410 553 aaPredicted RBP11.27□□□□□ -0.6
CNOT4-204ENST00000414802 ARMCX4Q5H9R4 360 aa11.27□□□□□ -0.6
CNOT4-204ENST00000414802 TMEM255AQ5JRV8 349 aa11.27□□□□□ -0.6
CNOT4-204ENST00000414802 DMKNQ6E0U4 476 aaPredicted RBP11.27□□□□□ -0.6
CNOT4-204ENST00000414802 RGS7BPQ6MZT1 257 aaPredicted RBP11.27□□□□□ -0.6
CNOT4-204ENST00000414802 ZNF544Q6NX49 715 aa11.27□□□□□ -0.6
CNOT4-204ENST00000414802 ZNF676Q8N7Q3 588 aa11.27□□□□□ -0.6
CNOT4-204ENST00000414802 OR52H1Q8NGJ2 320 aa11.27□□□□□ -0.6
CNOT4-204ENST00000414802 LILRB1Q8NHL6 650 aaPredicted RBP11.27□□□□□ -0.6
CNOT4-204ENST00000414802 RPS4Y2Q8TD47 263 aa11.27□□□□□ -0.6
CNOT4-204ENST00000414802 RGP1Q92546 391 aaPredicted RBP11.27□□□□□ -0.6
CNOT4-204ENST00000414802 MUL1Q969V5 352 aa11.27□□□□□ -0.6
CNOT4-204ENST00000414802 SGK3Q96BR1 496 aa11.27□□□□□ -0.6
CNOT4-204ENST00000414802 SMIM19Q96E16 107 aa11.27□□□□□ -0.6
CNOT4-204ENST00000414802 FAM71F1Q96KD3 344 aaPredicted RBP11.27□□□□□ -0.6
CNOT4-204ENST00000414802 BCL2L14Q9BZR8 327 aa11.27□□□□□ -0.6
CNOT4-204ENST00000414802 GPR84Q9NQS5 396 aa11.27□□□□□ -0.6
CNOT4-204ENST00000414802 SPEF1Q9Y4P9 236 aa11.27□□□□□ -0.6
CNOT4-204ENST00000414802 TACC2O95359 2948 aa11.27□□□□□ -0.61
CNOT4-204ENST00000414802 USF3Q68DE3 2245 aa11.27□□□□□ -0.61
CNOT4-204ENST00000414802 ACOD1A6NK06 481 aa11.27□□□□□ -0.61
CNOT4-204ENST00000414802 OGG1O15527 345 aa11.27□□□□□ -0.61
CNOT4-204ENST00000414802 XRCC2O43543 280 aa11.27□□□□□ -0.61
CNOT4-204ENST00000414802 ZFPL1O95159 310 aa11.27□□□□□ -0.61
CNOT4-204ENST00000414802 CLPTM1O96005 669 aa11.27□□□□□ -0.61
CNOT4-204ENST00000414802 BDH1Q02338 343 aa11.27□□□□□ -0.61
CNOT4-204ENST00000414802 MLLT11Q13015 90 aaPredicted RBP11.27□□□□□ -0.61
CNOT4-204ENST00000414802 MALLQ13021 153 aa11.27□□□□□ -0.61
CNOT4-204ENST00000414802 ZNF672Q499Z4 452 aaPredicted RBP11.27□□□□□ -0.61
CNOT4-204ENST00000414802 CCDC58Q4VC31 144 aa11.27□□□□□ -0.61
CNOT4-204ENST00000414802 MRPL21Q7Z2W9 205 aaKnown RBP11.27□□□□□ -0.61
CNOT4-204ENST00000414802 LRP11Q86VZ4 500 aa11.27□□□□□ -0.61
CNOT4-204ENST00000414802 NUP37Q8NFH4 326 aa11.27□□□□□ -0.61
CNOT4-204ENST00000414802 OR51A4Q8NGJ6 313 aa11.27□□□□□ -0.61
CNOT4-204ENST00000414802 OR5AK2Q8NH90 309 aa11.27□□□□□ -0.61
CNOT4-204ENST00000414802 TMEM171Q8WVE6 324 aa11.27□□□□□ -0.61
CNOT4-204ENST00000414802 FCGR1BQ92637 280 aa11.27□□□□□ -0.61
CNOT4-204ENST00000414802 AKAP1Q92667 903 aaKnown RBP eCLIP11.27□□□□□ -0.61
CNOT4-204ENST00000414802 UFD1Q92890 307 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms