RNA–Protein interactions for RNA: ENST00000414411.3

DDB1-202, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,904 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-202ENST00000414411 CD3GP09693 182 aa8.75□□□□□ -1.01
DDB1-202ENST00000414411 ALOX5APP20292 161 aa8.75□□□□□ -1.01
DDB1-202ENST00000414411 MAPK3P27361 379 aaPredicted RBP8.75□□□□□ -1.01
DDB1-202ENST00000414411 AGTR1P30556 359 aa8.75□□□□□ -1.01
DDB1-202ENST00000414411 MAGEB1P43366 347 aa8.75□□□□□ -1.01
DDB1-202ENST00000414411 CLDN17P56750 224 aa8.75□□□□□ -1.01
DDB1-202ENST00000414411 EGR3Q06889 387 aa8.75□□□□□ -1.01
DDB1-202ENST00000414411 PMPCAQ10713 525 aa8.75□□□□□ -1.01
DDB1-202ENST00000414411 FOXF2Q12947 444 aa8.75□□□□□ -1.01
DDB1-202ENST00000414411 Q499Y3 187 aa8.75□□□□□ -1.01
DDB1-202ENST00000414411 OXLD1Q5BKU9 147 aa8.75□□□□□ -1.01
DDB1-202ENST00000414411 LHFPL2Q6ZUX7 228 aa8.75□□□□□ -1.01
DDB1-202ENST00000414411 FAM214BQ7L5A3 538 aa8.75□□□□□ -1.01
DDB1-202ENST00000414411 DPY19L4Q7Z388 723 aa8.75□□□□□ -1.01
DDB1-202ENST00000414411 TOMM5Q8N4H5 51 aa8.75□□□□□ -1.01
DDB1-202ENST00000414411 SMIM4Q8WVI0 70 aa8.75□□□□□ -1.01
DDB1-202ENST00000414411 ASB10Q8WXI3 467 aa8.75□□□□□ -1.01
DDB1-202ENST00000414411 INTS12Q96CB8 462 aaKnown RBP8.75□□□□□ -1.01
DDB1-202ENST00000414411 ZFP3Q96NJ6 502 aa8.75□□□□□ -1.01
DDB1-202ENST00000414411 INTS14Q96SY0 518 aa8.75□□□□□ -1.01
DDB1-202ENST00000414411 EMC6Q9BV81 110 aa8.75□□□□□ -1.01
DDB1-202ENST00000414411 MRPL13Q9BYD1 178 aaKnown RBP8.75□□□□□ -1.01
DDB1-202ENST00000414411 MCUBQ9NWR8 336 aa8.75□□□□□ -1.01
DDB1-202ENST00000414411 EMC3Q9P0I2 261 aa8.75□□□□□ -1.01
DDB1-202ENST00000414411 PFDN2Q9UHV9 154 aa8.75□□□□□ -1.01
DDB1-202ENST00000414411 IKZF2Q9UKS7 526 aa8.75□□□□□ -1.01
DDB1-202ENST00000414411 RCE1Q9Y256 329 aa8.75□□□□□ -1.01
DDB1-202ENST00000414411 MRPS7Q9Y2R9 242 aaKnown RBP8.75□□□□□ -1.01
DDB1-202ENST00000414411 TMEM14AQ9Y6G1 99 aa8.75□□□□□ -1.01
DDB1-202ENST00000414411 NCOA6Q14686 2063 aaPredicted RBP8.75□□□□□ -1.01
DDB1-202ENST00000414411 USP9XQ93008 2570 aaPredicted RBP8.74□□□□□ -1.01
DDB1-202ENST00000414411 OR4C45A6NMZ5 311 aa8.74□□□□□ -1.01
DDB1-202ENST00000414411 HSPB2A8KAH6 182 aa8.74□□□□□ -1.01
DDB1-202ENST00000414411 PHYHO14832 338 aa8.74□□□□□ -1.01
DDB1-202ENST00000414411 SMAD7O15105 426 aaKnown RBP8.74□□□□□ -1.01
DDB1-202ENST00000414411 TNFSF13O75888 250 aa8.74□□□□□ -1.01
DDB1-202ENST00000414411 DAP3P51398 398 aaKnown RBP8.74□□□□□ -1.01
DDB1-202ENST00000414411 CASP6P55212 293 aa8.74□□□□□ -1.01
DDB1-202ENST00000414411 BIDP55957 195 aa8.74□□□□□ -1.01
DDB1-202ENST00000414411 RAB25P57735 213 aa8.74□□□□□ -1.01
DDB1-202ENST00000414411 MELKQ14680 651 aa8.74□□□□□ -1.01
DDB1-202ENST00000414411 HSPB2Q16082 182 aa8.74□□□□□ -1.01
DDB1-202ENST00000414411 HIST3H3Q16695 136 aa8.74□□□□□ -1.01
DDB1-202ENST00000414411 NDUFA5Q16718 116 aa8.74□□□□□ -1.01
DDB1-202ENST00000414411 EIF2S3LQ2VIR3 472 aaKnown RBP8.74□□□□□ -1.01
DDB1-202ENST00000414411 RNASE12Q5GAN4 147 aaKnown RBP8.74□□□□□ -1.01
DDB1-202ENST00000414411 HES5Q5TA89 166 aa8.74□□□□□ -1.01
DDB1-202ENST00000414411 RIPPLY2Q5TAB7 128 aa8.74□□□□□ -1.01
DDB1-202ENST00000414411 NUFIP2Q7Z417 695 aaKnown RBP8.74□□□□□ -1.01
DDB1-202ENST00000414411 LIX1LQ8IVB5 337 aa8.74□□□□□ -1.01
DDB1-202ENST00000414411 MCEMP1Q8IX19 187 aa8.74□□□□□ -1.01
DDB1-202ENST00000414411 CMTM4Q8IZR5 234 aa8.74□□□□□ -1.01
DDB1-202ENST00000414411 GCNT2Q8N0V5 402 aa8.74□□□□□ -1.01
DDB1-202ENST00000414411 TMEM123Q8N131 208 aa8.74□□□□□ -1.01
DDB1-202ENST00000414411 ZNF433Q8N7K0 673 aaPredicted RBP8.74□□□□□ -1.01
DDB1-202ENST00000414411 OTOSQ8NHW6 89 aa8.74□□□□□ -1.01
DDB1-202ENST00000414411 AKAP1Q92667 903 aaKnown RBP eCLIP8.74□□□□□ -1.01
DDB1-202ENST00000414411 SLC25A38Q96DW6 304 aa8.74□□□□□ -1.01
DDB1-202ENST00000414411 SLC25A44Q96H78 314 aaPredicted RBP8.74□□□□□ -1.01
DDB1-202ENST00000414411 OR2M2Q96R28 347 aa8.74□□□□□ -1.01
DDB1-202ENST00000414411 DPAGT1Q9H3H5 408 aa8.74□□□□□ -1.01
DDB1-202ENST00000414411 NUDT15Q9NV35 164 aa8.74□□□□□ -1.01
DDB1-202ENST00000414411 PARPBPQ9NWS1 579 aa8.74□□□□□ -1.01
DDB1-202ENST00000414411 ING3Q9NXR8 418 aa8.74□□□□□ -1.01
DDB1-202ENST00000414411 SH3BGRL2Q9UJC5 107 aa8.74□□□□□ -1.01
DDB1-202ENST00000414411 FKBP7Q9Y680 259 aa8.74□□□□□ -1.01
DDB1-202ENST00000414411 V9GY05 133 aa8.74□□□□□ -1.01
DDB1-202ENST00000414411 A0A0G2JNJ9 132 aa8.74□□□□□ -1.01
DDB1-202ENST00000414411 C7orf66A4D0T2 115 aa8.74□□□□□ -1.01
DDB1-202ENST00000414411 PRSS37A4D1T9 235 aa8.74□□□□□ -1.01
DDB1-202ENST00000414411 RNF223E7ERA6 249 aa8.74□□□□□ -1.01
DDB1-202ENST00000414411 ZNF254O75437 659 aa8.74□□□□□ -1.01
DDB1-202ENST00000414411 GPANK1O95872 356 aa8.74□□□□□ -1.01
DDB1-202ENST00000414411 CGAP01215 116 aa8.74□□□□□ -1.01
DDB1-202ENST00000414411 GNLYP22749 145 aa8.74□□□□□ -1.01
DDB1-202ENST00000414411 RPS27P42677 84 aaKnown RBP8.74□□□□□ -1.01
DDB1-202ENST00000414411 UQCRFS1P47985 274 aa8.74□□□□□ -1.01
DDB1-202ENST00000414411 SELENOPP49908 381 aa8.74□□□□□ -1.01
DDB1-202ENST00000414411 BCL2L15Q5TBC7 163 aa8.74□□□□□ -1.01
DDB1-202ENST00000414411 FAM205BPQ63HN1 556 aa8.74□□□□□ -1.01
DDB1-202ENST00000414411 TMEM211Q6ICI0 200 aa8.74□□□□□ -1.01
DDB1-202ENST00000414411 STAC2Q6ZMT1 411 aa8.74□□□□□ -1.01
DDB1-202ENST00000414411 AAED1Q7RTV5 226 aa8.74□□□□□ -1.01
DDB1-202ENST00000414411 SLC7A5P1Q8MH63 180 aa8.74□□□□□ -1.01
DDB1-202ENST00000414411 ASCC1Q8N9N2 400 aaKnown RBP8.74□□□□□ -1.01
DDB1-202ENST00000414411 OR2G2Q8NGZ5 317 aa8.74□□□□□ -1.01
DDB1-202ENST00000414411 NSMAFQ92636 917 aa8.74□□□□□ -1.01
DDB1-202ENST00000414411 STARD4Q96DR4 205 aa8.74□□□□□ -1.01
DDB1-202ENST00000414411 C7orf50Q9BRJ6 194 aaKnown RBP8.74□□□□□ -1.01
DDB1-202ENST00000414411 TRAF4Q9BUZ4 470 aaPredicted RBP8.74□□□□□ -1.01
DDB1-202ENST00000414411 MRI1Q9BV20 369 aa8.74□□□□□ -1.01
DDB1-202ENST00000414411 SLITRK2Q9H156 845 aa8.74□□□□□ -1.01
DDB1-202ENST00000414411 NIPAL2Q9H841 368 aa8.74□□□□□ -1.01
DDB1-202ENST00000414411 LIN7BQ9HAP6 207 aa8.74□□□□□ -1.01
DDB1-202ENST00000414411 TCF7L1Q9HCS4 588 aa8.74□□□□□ -1.01
DDB1-202ENST00000414411 PLSCR4Q9NRQ2 329 aa8.74□□□□□ -1.01
DDB1-202ENST00000414411 PLSCR3Q9NRY6 295 aa8.74□□□□□ -1.01
DDB1-202ENST00000414411 Q9UFV3 132 aa8.74□□□□□ -1.01
DDB1-202ENST00000414411 KCNG2Q9UJ96 466 aa8.74□□□□□ -1.01
DDB1-202ENST00000414411 FOXD3Q9UJU5 478 aaPredicted RBP8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms