RNA–Protein interactions for RNA: ENST00000411552.5

NOD1-202, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

TSL 1 (best)

Gene NOD1, Length 794 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-202ENST00000411552 ALOX5APP20292 161 aa13.84□□□□□ -0.19
NOD1-202ENST00000411552 TNFSF4P23510 183 aa13.84□□□□□ -0.19
NOD1-202ENST00000411552 GPR6P46095 362 aaPredicted RBP13.84□□□□□ -0.19
NOD1-202ENST00000411552 ZNF121P58317 390 aaPredicted RBP13.84□□□□□ -0.19
NOD1-202ENST00000411552 ZIK1Q3SY52 487 aaPredicted RBP13.84□□□□□ -0.19
NOD1-202ENST00000411552 GID4Q8IVV7 300 aa13.84□□□□□ -0.19
NOD1-202ENST00000411552 OR10AD1Q8NGE0 317 aa13.84□□□□□ -0.19
NOD1-202ENST00000411552 OR13G1Q8NGZ3 307 aa13.84□□□□□ -0.19
NOD1-202ENST00000411552 CNN2Q99439 309 aaKnown RBP13.84□□□□□ -0.19
NOD1-202ENST00000411552 SLC30A2Q9BRI3 323 aa13.84□□□□□ -0.19
NOD1-202ENST00000411552 TREM2Q9NZC2 230 aa13.84□□□□□ -0.19
NOD1-202ENST00000411552 DNAJC27Q9NZQ0 273 aa13.84□□□□□ -0.19
NOD1-202ENST00000411552 DYSFO75923 2080 aa13.84□□□□□ -0.19
NOD1-202ENST00000411552 APOC1P02654 83 aa13.83□□□□□ -0.2
NOD1-202ENST00000411552 ANXA2P07355 339 aaKnown RBP13.83□□□□□ -0.2
NOD1-202ENST00000411552 IL2RGP31785 369 aa13.83□□□□□ -0.2
NOD1-202ENST00000411552 CHN2P52757 468 aa13.83□□□□□ -0.2
NOD1-202ENST00000411552 RAD23AP54725 363 aa13.83□□□□□ -0.2
NOD1-202ENST00000411552 CDC42P60953 191 aa13.83□□□□□ -0.2
NOD1-202ENST00000411552 ZSCAN26Q16670 478 aa13.83□□□□□ -0.2
NOD1-202ENST00000411552 HFEQ30201 348 aa13.83□□□□□ -0.2
NOD1-202ENST00000411552 KRTAP21-3Q3LHN1 58 aa13.83□□□□□ -0.2
NOD1-202ENST00000411552 LRRN1Q6UXK5 716 aa13.83□□□□□ -0.2
NOD1-202ENST00000411552 FAM57BQ71RH2 274 aa13.83□□□□□ -0.2
NOD1-202ENST00000411552 PRSS45Q7RTY3 260 aa13.83□□□□□ -0.2
NOD1-202ENST00000411552 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.83□□□□□ -0.2
NOD1-202ENST00000411552 OR8J1Q8NGP2 316 aa13.83□□□□□ -0.2
NOD1-202ENST00000411552 CCL17Q92583 94 aa13.83□□□□□ -0.2
NOD1-202ENST00000411552 OR2V2Q96R30 315 aa13.83□□□□□ -0.2
NOD1-202ENST00000411552 SLC29A1Q99808 456 aa13.83□□□□□ -0.2
NOD1-202ENST00000411552 REPIN1Q9BWE0 567 aaKnown RBP13.83□□□□□ -0.2
NOD1-202ENST00000411552 ADGRL4Q9HBW9 690 aa13.83□□□□□ -0.2
NOD1-202ENST00000411552 IL19Q9UHD0 177 aa13.83□□□□□ -0.2
NOD1-202ENST00000411552 NAV3Q8IVL0 2385 aa13.82□□□□□ -0.2
NOD1-202ENST00000411552 A0A1B0GWJ7 208 aa13.82□□□□□ -0.2
NOD1-202ENST00000411552 CD300LBA8K4G0 201 aa13.82□□□□□ -0.2
NOD1-202ENST00000411552 ANKRD65E5RJM6 399 aa13.82□□□□□ -0.2
NOD1-202ENST00000411552 E9PQ18 207 aa13.82□□□□□ -0.2
NOD1-202ENST00000411552 H0YL77 283 aa13.82□□□□□ -0.2
NOD1-202ENST00000411552 WNT9BO14905 357 aa13.82□□□□□ -0.2
NOD1-202ENST00000411552 MLNRO43193 412 aa13.82□□□□□ -0.2
NOD1-202ENST00000411552 TBX1O43435 398 aa13.82□□□□□ -0.2
NOD1-202ENST00000411552 XRCC2O43543 280 aa13.82□□□□□ -0.2
NOD1-202ENST00000411552 HNRNPA0Q13151 305 aaKnown RBP13.82□□□□□ -0.2
NOD1-202ENST00000411552 AVPI1Q5T686 147 aa13.82□□□□□ -0.2
NOD1-202ENST00000411552 CYB5R2Q6BCY4 276 aa13.82□□□□□ -0.2
NOD1-202ENST00000411552 ZBTB49Q6ZSB9 765 aa13.82□□□□□ -0.2
NOD1-202ENST00000411552 FAM81AQ8TBF8 368 aa13.82□□□□□ -0.2
NOD1-202ENST00000411552 SPRYD4Q8WW59 207 aaPredicted RBP13.82□□□□□ -0.2
NOD1-202ENST00000411552 ITLN1Q8WWA0 313 aa13.82□□□□□ -0.2
NOD1-202ENST00000411552 SPSB4Q96A44 273 aa13.82□□□□□ -0.2
NOD1-202ENST00000411552 EME1Q96AY2 570 aa13.82□□□□□ -0.2
NOD1-202ENST00000411552 HRASLS5Q96KN8 279 aa13.82□□□□□ -0.2
NOD1-202ENST00000411552 MBOAT4Q96T53 435 aa13.82□□□□□ -0.2
NOD1-202ENST00000411552 SOX7Q9BT81 388 aa13.82□□□□□ -0.2
NOD1-202ENST00000411552 NARFLQ9H6Q4 476 aa13.82□□□□□ -0.2
NOD1-202ENST00000411552 BRD7Q9NPI1 651 aa13.82□□□□□ -0.2
NOD1-202ENST00000411552 TMEM100Q9NV29 134 aa13.82□□□□□ -0.2
NOD1-202ENST00000411552 HAO2Q9NYQ3 351 aa13.82□□□□□ -0.2
NOD1-202ENST00000411552 COPS3Q9UNS2 423 aa13.82□□□□□ -0.2
NOD1-202ENST00000411552 LRP12Q9Y561 859 aa13.82□□□□□ -0.2
NOD1-202ENST00000411552 GGT3PA6NGU5 568 aa13.81□□□□□ -0.2
NOD1-202ENST00000411552 PRR32B1ATL7 298 aa13.81□□□□□ -0.2
NOD1-202ENST00000411552 CLDN25C9JDP6 229 aa13.81□□□□□ -0.2
NOD1-202ENST00000411552 INAFM1C9JVW0 142 aa13.81□□□□□ -0.2
NOD1-202ENST00000411552 PSMD9O00233 223 aa13.81□□□□□ -0.2
NOD1-202ENST00000411552 HLA-DPB1P04440 258 aa13.81□□□□□ -0.2
NOD1-202ENST00000411552 ZNF16P17020 682 aaPredicted RBP13.81□□□□□ -0.2
NOD1-202ENST00000411552 TNFRSF1AP19438 455 aa13.81□□□□□ -0.2
NOD1-202ENST00000411552 HTR1FP30939 366 aa13.81□□□□□ -0.2
NOD1-202ENST00000411552 RBMXP38159 391 aaKnown RBP13.81□□□□□ -0.2
NOD1-202ENST00000411552 GZMKP49863 264 aa13.81□□□□□ -0.2
NOD1-202ENST00000411552 MVKQ03426 396 aa13.81□□□□□ -0.2
NOD1-202ENST00000411552 GABPB1Q06547 395 aaPredicted RBP13.81□□□□□ -0.2
NOD1-202ENST00000411552 TIGD6Q17RP2 521 aa13.81□□□□□ -0.2
NOD1-202ENST00000411552 C6orf52Q5T4I8 152 aa13.81□□□□□ -0.2
NOD1-202ENST00000411552 KCTD18Q6PI47 426 aaPredicted RBP13.81□□□□□ -0.2
NOD1-202ENST00000411552 KRT77Q7Z794 578 aa13.81□□□□□ -0.2
NOD1-202ENST00000411552 SLC35F2Q8IXU6 374 aa13.81□□□□□ -0.2
NOD1-202ENST00000411552 RFLNBQ8N5W9 214 aa13.81□□□□□ -0.2
NOD1-202ENST00000411552 OR52H1Q8NGJ2 320 aa13.81□□□□□ -0.2
NOD1-202ENST00000411552 CLDND2Q8NHS1 167 aa13.81□□□□□ -0.2
NOD1-202ENST00000411552 ASB17Q8WXJ9 295 aa13.81□□□□□ -0.2
NOD1-202ENST00000411552 HPS1Q92902 700 aa13.81□□□□□ -0.2
NOD1-202ENST00000411552 UBE2FQ969M7 185 aa13.81□□□□□ -0.2
NOD1-202ENST00000411552 SGK3Q96BR1 496 aa13.81□□□□□ -0.2
NOD1-202ENST00000411552 TTTY10Q9BZA0 68 aa13.81□□□□□ -0.2
NOD1-202ENST00000411552 OPA3Q9H6K4 179 aa13.81□□□□□ -0.2
NOD1-202ENST00000411552 NIPAL2Q9H841 368 aa13.81□□□□□ -0.2
NOD1-202ENST00000411552 SP140LQ9H930 580 aa13.81□□□□□ -0.2
NOD1-202ENST00000411552 YAE1D1Q9NRH1 226 aa13.81□□□□□ -0.2
NOD1-202ENST00000411552 IMPAD1Q9NX62 359 aa13.81□□□□□ -0.2
NOD1-202ENST00000411552 DCAF16Q9NXF7 216 aa13.81□□□□□ -0.2
NOD1-202ENST00000411552 ZNF319Q9P2F9 582 aa13.81□□□□□ -0.2
NOD1-202ENST00000411552 WARS2Q9UGM6 360 aaKnown RBP13.81□□□□□ -0.2
NOD1-202ENST00000411552 TMEM14AQ9Y6G1 99 aa13.81□□□□□ -0.2
NOD1-202ENST00000411552 F5H5P2 479 aa13.8□□□□□ -0.2
NOD1-202ENST00000411552 PSMA6P60900 246 aaKnown RBP13.8□□□□□ -0.2
NOD1-202ENST00000411552 ROM1Q03395 351 aa13.8□□□□□ -0.2
NOD1-202ENST00000411552 OR56B2PQ8NGI1 322 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms