RNA–Protein interactions for RNA: ENST00000409543.6

TSPAN4-209, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TSPAN4, Length 1,031 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-209ENST00000409543 GATA4P43694 442 aa16.48■□□□□ 0.23
TSPAN4-209ENST00000409543 ZNF92Q03936 586 aa16.48■□□□□ 0.23
TSPAN4-209ENST00000409543 TAF13Q15543 124 aa16.48■□□□□ 0.23
TSPAN4-209ENST00000409543 MOGAT3Q86VF5 341 aa16.48■□□□□ 0.23
TSPAN4-209ENST00000409543 SPATA24Q86W54 205 aa16.48■□□□□ 0.23
TSPAN4-209ENST00000409543 IQCF1Q8N6M8 205 aa16.48■□□□□ 0.23
TSPAN4-209ENST00000409543 REPIN1Q9BWE0 567 aaKnown RBP16.48■□□□□ 0.23
TSPAN4-209ENST00000409543 SLC22A4Q9H015 551 aa16.48■□□□□ 0.23
TSPAN4-209ENST00000409543 C7orf69Q9H7B7 122 aa16.48■□□□□ 0.23
TSPAN4-209ENST00000409543 NOP16Q9Y3C1 178 aaKnown RBP16.48■□□□□ 0.23
TSPAN4-209ENST00000409543 ARHGAP32A7KAX9 2087 aa16.48■□□□□ 0.23
TSPAN4-209ENST00000409543 TCRBV3S1A0A5B6 114 aa16.47■□□□□ 0.23
TSPAN4-209ENST00000409543 FAM183AA6NL82 134 aa16.47■□□□□ 0.23
TSPAN4-209ENST00000409543 LRRC30A6NM36 301 aa16.47■□□□□ 0.23
TSPAN4-209ENST00000409543 F5H0A9 414 aaPredicted RBP16.47■□□□□ 0.23
TSPAN4-209ENST00000409543 E2F6O75461 281 aa16.47■□□□□ 0.23
TSPAN4-209ENST00000409543 DNAJC8O75937 253 aaPredicted RBP16.47■□□□□ 0.23
TSPAN4-209ENST00000409543 FSTL3O95633 263 aa16.47■□□□□ 0.23
TSPAN4-209ENST00000409543 CYB5R3P00387 301 aaPredicted RBP16.47■□□□□ 0.23
TSPAN4-209ENST00000409543 CD200P41217 278 aa16.47■□□□□ 0.23
TSPAN4-209ENST00000409543 PRKXP51817 358 aa16.47■□□□□ 0.23
TSPAN4-209ENST00000409543 MAB21L1Q13394 359 aa16.47■□□□□ 0.23
TSPAN4-209ENST00000409543 PAPD5Q8NDF8 572 aaKnown RBP16.47■□□□□ 0.23
TSPAN4-209ENST00000409543 ERGIC1Q969X5 290 aa16.47■□□□□ 0.23
TSPAN4-209ENST00000409543 MED20Q9H944 212 aa16.47■□□□□ 0.23
TSPAN4-209ENST00000409543 MARCH7Q9H992 704 aa16.47■□□□□ 0.23
TSPAN4-209ENST00000409543 ZNF556Q9HAH1 456 aa16.47■□□□□ 0.23
TSPAN4-209ENST00000409543 TMEM165Q9HC07 324 aa16.47■□□□□ 0.23
TSPAN4-209ENST00000409543 DNAJB9Q9UBS3 223 aa16.47■□□□□ 0.23
TSPAN4-209ENST00000409543 OPN4Q9UHM6 478 aa16.47■□□□□ 0.23
TSPAN4-209ENST00000409543 POMPQ9Y244 141 aa16.47■□□□□ 0.23
TSPAN4-209ENST00000409543 IGHV3-64DA0A0J9YX35 117 aa16.46■□□□□ 0.23
TSPAN4-209ENST00000409543 C5orf63A6NC05 138 aa16.46■□□□□ 0.23
TSPAN4-209ENST00000409543 A8MXK9 166 aa16.46■□□□□ 0.23
TSPAN4-209ENST00000409543 FKBP6O75344 327 aa16.46■□□□□ 0.23
TSPAN4-209ENST00000409543 GLCEO94923 617 aa16.46■□□□□ 0.23
TSPAN4-209ENST00000409543 WNT2P09544 360 aa16.46■□□□□ 0.23
TSPAN4-209ENST00000409543 OSMP13725 252 aa16.46■□□□□ 0.23
TSPAN4-209ENST00000409543 EPHA1P21709 976 aa16.46■□□□□ 0.23
TSPAN4-209ENST00000409543 PAICSP22234 425 aaKnown RBP16.46■□□□□ 0.23
TSPAN4-209ENST00000409543 ANOS1P23352 680 aa16.46■□□□□ 0.23
TSPAN4-209ENST00000409543 POU1F1P28069 291 aa16.46■□□□□ 0.23
TSPAN4-209ENST00000409543 GSTT1P30711 240 aa16.46■□□□□ 0.23
TSPAN4-209ENST00000409543 PMELP40967 661 aa16.46■□□□□ 0.23
TSPAN4-209ENST00000409543 SLC15A1P46059 708 aa16.46■□□□□ 0.23
TSPAN4-209ENST00000409543 GRB2P62993 217 aaKnown RBP16.46■□□□□ 0.23
TSPAN4-209ENST00000409543 CBX1P83916 185 aa16.46■□□□□ 0.23
TSPAN4-209ENST00000409543 EIF2B1Q14232 305 aaKnown RBP16.46■□□□□ 0.23
TSPAN4-209ENST00000409543 GINS1Q14691 196 aa16.46■□□□□ 0.23
TSPAN4-209ENST00000409543 GLYATL3Q5SZD4 288 aa16.46■□□□□ 0.23
TSPAN4-209ENST00000409543 C1orf87Q8N0U7 546 aa16.46■□□□□ 0.23
TSPAN4-209ENST00000409543 OR2AE1Q8NHA4 323 aa16.46■□□□□ 0.23
TSPAN4-209ENST00000409543 NANPQ8TBE9 248 aa16.46■□□□□ 0.23
TSPAN4-209ENST00000409543 OTULINQ96BN8 352 aa16.46■□□□□ 0.23
TSPAN4-209ENST00000409543 INTS14Q96SY0 518 aa16.46■□□□□ 0.23
TSPAN4-209ENST00000409543 TOR3AQ9H497 397 aa16.46■□□□□ 0.23
TSPAN4-209ENST00000409543 OPA3Q9H6K4 179 aa16.46■□□□□ 0.23
TSPAN4-209ENST00000409543 GGT3PA6NGU5 568 aa16.45■□□□□ 0.22
TSPAN4-209ENST00000409543 CEACAM18A8MTB9 384 aa16.45■□□□□ 0.22
TSPAN4-209ENST00000409543 GMDSO60547 372 aa16.45■□□□□ 0.22
TSPAN4-209ENST00000409543 HMGN1P05114 100 aa16.45■□□□□ 0.22
TSPAN4-209ENST00000409543 ANXA8P13928 327 aa16.45■□□□□ 0.22
TSPAN4-209ENST00000409543 PRKACGP22612 351 aa16.45■□□□□ 0.22
TSPAN4-209ENST00000409543 CA6P23280 308 aa16.45■□□□□ 0.22
TSPAN4-209ENST00000409543 RAD23AP54725 363 aa16.45■□□□□ 0.22
TSPAN4-209ENST00000409543 SEC61A1P61619 476 aaKnown RBP16.45■□□□□ 0.22
TSPAN4-209ENST00000409543 CDK5Q00535 292 aa16.45■□□□□ 0.22
TSPAN4-209ENST00000409543 OR8G1Q15617 311 aa16.45■□□□□ 0.22
TSPAN4-209ENST00000409543 RHOUQ7L0Q8 258 aa16.45■□□□□ 0.22
TSPAN4-209ENST00000409543 DPY19L4Q7Z388 723 aa16.45■□□□□ 0.22
TSPAN4-209ENST00000409543 ERI1Q8IV48 349 aaKnown RBP16.45■□□□□ 0.22
TSPAN4-209ENST00000409543 HS3ST5Q8IZT8 346 aa16.45■□□□□ 0.22
TSPAN4-209ENST00000409543 OR6N2Q8NGY6 317 aa16.45■□□□□ 0.22
TSPAN4-209ENST00000409543 Q8TCH9 128 aa16.45■□□□□ 0.22
TSPAN4-209ENST00000409543 ZNF418Q8TF45 676 aaPredicted RBP16.45■□□□□ 0.22
TSPAN4-209ENST00000409543 ABHD6Q9BV23 337 aa16.45■□□□□ 0.22
TSPAN4-209ENST00000409543 MMP26Q9NRE1 261 aa16.45■□□□□ 0.22
TSPAN4-209ENST00000409543 LRCH1Q9Y2L9 728 aa16.45■□□□□ 0.22
TSPAN4-209ENST00000409543 FBN3Q75N90 2809 aa16.44■□□□□ 0.22
TSPAN4-209ENST00000409543 PRR23D1E9PI22 279 aaPredicted RBP16.44■□□□□ 0.22
TSPAN4-209ENST00000409543 TRAPPC2LH3BP13 241 aa16.44■□□□□ 0.22
TSPAN4-209ENST00000409543 GSC2O15499 205 aa16.44■□□□□ 0.22
TSPAN4-209ENST00000409543 XRCC2O43543 280 aa16.44■□□□□ 0.22
TSPAN4-209ENST00000409543 ZNF205O95201 554 aa16.44■□□□□ 0.22
TSPAN4-209ENST00000409543 VENTXO95231 258 aa16.44■□□□□ 0.22
TSPAN4-209ENST00000409543 FSHBP01225 129 aa16.44■□□□□ 0.22
TSPAN4-209ENST00000409543 APOC1P02654 83 aa16.44■□□□□ 0.22
TSPAN4-209ENST00000409543 PRR23D2P0DMB1 279 aaPredicted RBP16.44■□□□□ 0.22
TSPAN4-209ENST00000409543 SLC2A1P11166 492 aa16.44■□□□□ 0.22
TSPAN4-209ENST00000409543 IRF2P14316 349 aa16.44■□□□□ 0.22
TSPAN4-209ENST00000409543 ADRA2CP18825 462 aa16.44■□□□□ 0.22
TSPAN4-209ENST00000409543 ESCO2Q56NI9 601 aa16.44■□□□□ 0.22
TSPAN4-209ENST00000409543 USP43Q70EL4 1123 aa16.44■□□□□ 0.22
TSPAN4-209ENST00000409543 SPATC1Q76KD6 591 aa16.44■□□□□ 0.22
TSPAN4-209ENST00000409543 SHFQ7M4L6 423 aa16.44■□□□□ 0.22
TSPAN4-209ENST00000409543 TIGD4Q8IY51 512 aa16.44■□□□□ 0.22
TSPAN4-209ENST00000409543 DEFB108BQ8NET1 73 aa16.44■□□□□ 0.22
TSPAN4-209ENST00000409543 SEMA6DQ8NFY4 1073 aa16.44■□□□□ 0.22
TSPAN4-209ENST00000409543 OR11L1Q8NGX0 322 aa16.44■□□□□ 0.22
TSPAN4-209ENST00000409543 RNF133Q8WVZ7 376 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms