RNA–Protein interactions for RNA: ENST00000406881.3

PCDH11X-207, Transcript of protocadherin 11 X-linked, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH11X, Length 4,156 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11X-207ENST00000406881 CCR6P51684 374 aa4.24□□□□□ -1.73
PCDH11X-207ENST00000406881 FUT6P51993 359 aa4.24□□□□□ -1.73
PCDH11X-207ENST00000406881 BLOC1S1P78537 153 aa4.24□□□□□ -1.73
PCDH11X-207ENST00000406881 SPEM2Q0P670 501 aa4.24□□□□□ -1.73
PCDH11X-207ENST00000406881 CATR1Q13166 79 aa4.24□□□□□ -1.73
PCDH11X-207ENST00000406881 TSC22D1Q15714 1073 aa4.24□□□□□ -1.73
PCDH11X-207ENST00000406881 MSMO1Q15800 293 aa4.24□□□□□ -1.73
PCDH11X-207ENST00000406881 BAK1Q16611 211 aa4.24□□□□□ -1.73
PCDH11X-207ENST00000406881 FAM27D1Q5T7N8 215 aa4.24□□□□□ -1.73
PCDH11X-207ENST00000406881 SLC23A3Q6PIS1 610 aa4.24□□□□□ -1.73
PCDH11X-207ENST00000406881 CREB3L2Q70SY1 520 aa4.24□□□□□ -1.73
PCDH11X-207ENST00000406881 ZNF546Q86UE3 836 aa4.24□□□□□ -1.73
PCDH11X-207ENST00000406881 FJX1Q86VR8 437 aa4.24□□□□□ -1.73
PCDH11X-207ENST00000406881 BOLLQ8N9W6 283 aaKnown RBP4.24□□□□□ -1.73
PCDH11X-207ENST00000406881 SLC38A9Q8NBW4 561 aa4.24□□□□□ -1.73
PCDH11X-207ENST00000406881 ADIPOR1Q96A54 375 aa4.24□□□□□ -1.73
PCDH11X-207ENST00000406881 C10orf35Q96D05 121 aa4.24□□□□□ -1.73
PCDH11X-207ENST00000406881 MED30Q96HR3 178 aa4.24□□□□□ -1.73
PCDH11X-207ENST00000406881 REEP6Q96HR9 211 aa4.24□□□□□ -1.73
PCDH11X-207ENST00000406881 RNF170Q96K19 258 aa4.24□□□□□ -1.73
PCDH11X-207ENST00000406881 ZNF285Q96NJ3 590 aa4.24□□□□□ -1.73
PCDH11X-207ENST00000406881 ZNF436Q9C0F3 470 aaPredicted RBP4.24□□□□□ -1.73
PCDH11X-207ENST00000406881 GLRX2Q9NS18 164 aa4.24□□□□□ -1.73
PCDH11X-207ENST00000406881 GPR173Q9NS66 373 aa4.24□□□□□ -1.73
PCDH11X-207ENST00000406881 PLEKHB1Q9UF11 243 aaPredicted RBP4.24□□□□□ -1.73
PCDH11X-207ENST00000406881 MRM2Q9UI43 246 aaKnown RBP4.24□□□□□ -1.73
PCDH11X-207ENST00000406881 ING1Q9UK53 422 aaPredicted RBP4.24□□□□□ -1.73
PCDH11X-207ENST00000406881 PROCRQ9UNN8 238 aa4.24□□□□□ -1.73
PCDH11X-207ENST00000406881 LSM2Q9Y333 95 aaKnown RBP4.24□□□□□ -1.73
PCDH11X-207ENST00000406881 R4GN57 208 aa4.24□□□□□ -1.73
PCDH11X-207ENST00000406881 CEP290O15078 2479 aa4.24□□□□□ -1.73
PCDH11X-207ENST00000406881 SPAG17Q6Q759 2223 aa4.24□□□□□ -1.73
PCDH11X-207ENST00000406881 ASXL3Q9C0F0 2248 aa4.24□□□□□ -1.73
PCDH11X-207ENST00000406881 CENPVL1A0A0U1RR11 272 aa4.24□□□□□ -1.73
PCDH11X-207ENST00000406881 SERPINE3A8MV23 424 aa4.24□□□□□ -1.73
PCDH11X-207ENST00000406881 PRRG2O14669 202 aa4.24□□□□□ -1.73
PCDH11X-207ENST00000406881 CTDSPLO15194 276 aa4.24□□□□□ -1.73
PCDH11X-207ENST00000406881 FABP7O15540 132 aa4.24□□□□□ -1.73
PCDH11X-207ENST00000406881 FADS1O60427 444 aa4.24□□□□□ -1.73
PCDH11X-207ENST00000406881 ICMTO60725 284 aa4.24□□□□□ -1.73
PCDH11X-207ENST00000406881 ACTL6AO96019 429 aa4.24□□□□□ -1.73
PCDH11X-207ENST00000406881 IFNA1P01562 189 aa4.24□□□□□ -1.73
PCDH11X-207ENST00000406881 IL2RAP01589 272 aa4.24□□□□□ -1.73
PCDH11X-207ENST00000406881 S100A6P06703 90 aa4.24□□□□□ -1.73
PCDH11X-207ENST00000406881 SDHBP21912 280 aa4.24□□□□□ -1.73
PCDH11X-207ENST00000406881 CSF2RBP32927 897 aa4.24□□□□□ -1.73
PCDH11X-207ENST00000406881 RGS19P49795 217 aa4.24□□□□□ -1.73
PCDH11X-207ENST00000406881 ERVK-16P61578 105 aa4.24□□□□□ -1.73
PCDH11X-207ENST00000406881 RPL23AP62750 156 aaKnown RBP4.24□□□□□ -1.73
PCDH11X-207ENST00000406881 ZNF766Q5HY98 468 aa4.24□□□□□ -1.73
PCDH11X-207ENST00000406881 MRPL41Q8IXM3 137 aaKnown RBP4.24□□□□□ -1.73
PCDH11X-207ENST00000406881 OR11G2Q8NGC1 345 aa4.24□□□□□ -1.73
PCDH11X-207ENST00000406881 OR51S1Q8NGJ8 323 aa4.24□□□□□ -1.73
PCDH11X-207ENST00000406881 OR10R2Q8NGX6 335 aa4.24□□□□□ -1.73
PCDH11X-207ENST00000406881 ROBO4Q8WZ75 1007 aa4.24□□□□□ -1.73
PCDH11X-207ENST00000406881 NKX3-1Q99801 234 aaPredicted RBP4.24□□□□□ -1.73
PCDH11X-207ENST00000406881 AIFM2Q9BRQ8 373 aa4.24□□□□□ -1.73
PCDH11X-207ENST00000406881 PBDC1Q9BVG4 233 aa4.24□□□□□ -1.73
PCDH11X-207ENST00000406881 CHST6Q9GZX3 395 aa4.24□□□□□ -1.73
PCDH11X-207ENST00000406881 NXF2Q9GZY0 626 aaKnown RBP4.24□□□□□ -1.73
PCDH11X-207ENST00000406881 UNKLQ9H9P5 680 aaKnown RBP4.24□□□□□ -1.73
PCDH11X-207ENST00000406881 TAS2R5Q9NYW4 299 aa4.24□□□□□ -1.73
PCDH11X-207ENST00000406881 OR4C45A6NMZ5 311 aa4.24□□□□□ -1.73
PCDH11X-207ENST00000406881 CD300LBA8K4G0 201 aa4.24□□□□□ -1.73
PCDH11X-207ENST00000406881 M0QYG6 137 aa4.24□□□□□ -1.73
PCDH11X-207ENST00000406881 OIP5O43482 229 aa4.24□□□□□ -1.73
PCDH11X-207ENST00000406881 IGKV3-11P04433 115 aa4.24□□□□□ -1.73
PCDH11X-207ENST00000406881 LIFP15018 202 aa4.24□□□□□ -1.73
PCDH11X-207ENST00000406881 DCTDP32321 178 aa4.24□□□□□ -1.73
PCDH11X-207ENST00000406881 DEFA5Q01523 94 aa4.24□□□□□ -1.73
PCDH11X-207ENST00000406881 FMODQ06828 376 aa4.24□□□□□ -1.73
PCDH11X-207ENST00000406881 CAMK2BQ13554 666 aa4.24□□□□□ -1.73
PCDH11X-207ENST00000406881 OPCMLQ14982 345 aa4.24□□□□□ -1.73
PCDH11X-207ENST00000406881 EIF2S3LQ2VIR3 472 aaKnown RBP4.24□□□□□ -1.73
PCDH11X-207ENST00000406881 ANKRD16Q6P6B7 361 aa4.24□□□□□ -1.73
PCDH11X-207ENST00000406881 TFAP2EQ6VUC0 442 aa4.24□□□□□ -1.73
PCDH11X-207ENST00000406881 C16orf47Q6ZP98 133 aaPredicted RBP4.24□□□□□ -1.73
PCDH11X-207ENST00000406881 LSRQ86X29 649 aaPredicted RBP4.24□□□□□ -1.73
PCDH11X-207ENST00000406881 LGI3Q8N145 548 aa4.24□□□□□ -1.73
PCDH11X-207ENST00000406881 OR1S1Q8NH92 325 aa4.24□□□□□ -1.73
PCDH11X-207ENST00000406881 ARL11Q969Q4 196 aa4.24□□□□□ -1.73
PCDH11X-207ENST00000406881 KIRREL1Q96J84 757 aa4.24□□□□□ -1.73
PCDH11X-207ENST00000406881 C12orf49Q9H741 205 aa4.24□□□□□ -1.73
PCDH11X-207ENST00000406881 AUNIPQ9H7T9 357 aa4.24□□□□□ -1.73
PCDH11X-207ENST00000406881 ZNF275Q9NSD4 429 aaPredicted RBP4.24□□□□□ -1.73
PCDH11X-207ENST00000406881 DOCK6Q96HP0 2047 aa4.23□□□□□ -1.73
PCDH11X-207ENST00000406881 IGHV3-15A0A0B4J1V0 119 aa4.23□□□□□ -1.73
PCDH11X-207ENST00000406881 NPIPB13A6NJU9 1138 aa4.23□□□□□ -1.73
PCDH11X-207ENST00000406881 SHISA8B8ZZ34 492 aa4.23□□□□□ -1.73
PCDH11X-207ENST00000406881 NPIPB4C9JG80 1138 aa4.23□□□□□ -1.73
PCDH11X-207ENST00000406881 GSTZ1O43708 216 aaPredicted RBP4.23□□□□□ -1.73
PCDH11X-207ENST00000406881 NXPH2O95156 264 aa4.23□□□□□ -1.73
PCDH11X-207ENST00000406881 TBX6O95947 436 aaPredicted RBP4.23□□□□□ -1.73
PCDH11X-207ENST00000406881 AVPR2P30518 371 aa4.23□□□□□ -1.73
PCDH11X-207ENST00000406881 SRP9P49458 86 aaKnown RBP4.23□□□□□ -1.73
PCDH11X-207ENST00000406881 GSK3AP49840 483 aa4.23□□□□□ -1.73
PCDH11X-207ENST00000406881 MEOX1P50221 254 aa4.23□□□□□ -1.73
PCDH11X-207ENST00000406881 RPP30P78346 268 aaKnown RBP4.23□□□□□ -1.73
PCDH11X-207ENST00000406881 DEFB109BQ30KR1 87 aa4.23□□□□□ -1.73
PCDH11X-207ENST00000406881 C1QL3Q5VWW1 255 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms