RNA–Protein interactions for RNA: ENST00000406134.5

MSH2-202, Transcript of mutS homolog 2, humanhuman

TSL 1 (best) BASIC

Gene MSH2, Length 3,628 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-202ENST00000406134 AKIRIN1Q9H9L7 192 aaPredicted RBP8.71□□□□□ -1.01
MSH2-202ENST00000406134 CKLFQ9UBR5 152 aa8.71□□□□□ -1.01
MSH2-202ENST00000406134 FARSAQ9Y285 508 aaKnown RBP8.71□□□□□ -1.01
MSH2-202ENST00000406134 MAP1BP46821 2468 aaKnown RBP8.71□□□□□ -1.02
MSH2-202ENST00000406134 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa8.71□□□□□ -1.02
MSH2-202ENST00000406134 CD2P06729 351 aa8.71□□□□□ -1.02
MSH2-202ENST00000406134 MGMTP16455 207 aa8.71□□□□□ -1.02
MSH2-202ENST00000406134 CCL1P22362 96 aa8.71□□□□□ -1.02
MSH2-202ENST00000406134 BDKRB2P30411 391 aa8.71□□□□□ -1.02
MSH2-202ENST00000406134 SUMO3P55854 103 aaPredicted RBP8.71□□□□□ -1.02
MSH2-202ENST00000406134 RAB14P61106 215 aa8.71□□□□□ -1.02
MSH2-202ENST00000406134 TLE3Q04726 772 aa8.71□□□□□ -1.02
MSH2-202ENST00000406134 C17orf67Q0P5P2 114 aa8.71□□□□□ -1.02
MSH2-202ENST00000406134 LIN54Q6MZP7 749 aa8.71□□□□□ -1.02
MSH2-202ENST00000406134 SLC25A47Q6Q0C1 308 aa8.71□□□□□ -1.02
MSH2-202ENST00000406134 LYG2Q86SG7 212 aa8.71□□□□□ -1.02
MSH2-202ENST00000406134 OR10G3Q8NGC4 313 aa8.71□□□□□ -1.02
MSH2-202ENST00000406134 LHFPL5Q8TAF8 219 aa8.71□□□□□ -1.02
MSH2-202ENST00000406134 LYZL4Q96KX0 146 aa8.71□□□□□ -1.02
MSH2-202ENST00000406134 TMEM138Q9NPI0 162 aa8.71□□□□□ -1.02
MSH2-202ENST00000406134 ALKBH4Q9NXW9 302 aa8.71□□□□□ -1.02
MSH2-202ENST00000406134 PISDQ9UG56 409 aa8.71□□□□□ -1.02
MSH2-202ENST00000406134 RAB22AQ9UL26 194 aa8.71□□□□□ -1.02
MSH2-202ENST00000406134 NPIPA5E9PKD4 350 aa8.71□□□□□ -1.02
MSH2-202ENST00000406134 BPNT1O95861 308 aa8.71□□□□□ -1.02
MSH2-202ENST00000406134 HLA-AP01891 365 aaKnown RBP8.71□□□□□ -1.02
MSH2-202ENST00000406134 ABOP16442 354 aa8.71□□□□□ -1.02
MSH2-202ENST00000406134 AVPR2P30518 371 aa8.71□□□□□ -1.02
MSH2-202ENST00000406134 DNASE1L1P49184 302 aa8.71□□□□□ -1.02
MSH2-202ENST00000406134 TAGLNQ01995 201 aaKnown RBP8.71□□□□□ -1.02
MSH2-202ENST00000406134 RSPO1Q2MKA7 263 aaPredicted RBP8.71□□□□□ -1.02
MSH2-202ENST00000406134 CDNFQ49AH0 187 aa8.71□□□□□ -1.02
MSH2-202ENST00000406134 ZNF704Q6ZNC4 412 aaPredicted RBP8.71□□□□□ -1.02
MSH2-202ENST00000406134 WDSUB1Q8N9V3 476 aa8.71□□□□□ -1.02
MSH2-202ENST00000406134 OR8B12Q8NGG6 310 aa8.71□□□□□ -1.02
MSH2-202ENST00000406134 SPSB2Q99619 263 aa8.71□□□□□ -1.02
MSH2-202ENST00000406134 NUDT16L1Q9BRJ7 211 aaKnown RBP8.71□□□□□ -1.02
MSH2-202ENST00000406134 PPA2Q9H2U2 334 aa8.71□□□□□ -1.02
MSH2-202ENST00000406134 GAREM1Q9H706 876 aa8.71□□□□□ -1.02
MSH2-202ENST00000406134 NPIPA1Q9UND3 350 aa8.71□□□□□ -1.02
MSH2-202ENST00000406134 CEACAM18A8MTB9 384 aa8.7□□□□□ -1.02
MSH2-202ENST00000406134 GDF9O60383 454 aa8.7□□□□□ -1.02
MSH2-202ENST00000406134 ONECUT2O95948 504 aa8.7□□□□□ -1.02
MSH2-202ENST00000406134 CYB5AP00167 134 aa8.7□□□□□ -1.02
MSH2-202ENST00000406134 OPN1LWP04000 364 aa8.7□□□□□ -1.02
MSH2-202ENST00000406134 CSN2P05814 226 aa8.7□□□□□ -1.02
MSH2-202ENST00000406134 EIF1AXP47813 144 aaKnown RBP8.7□□□□□ -1.02
MSH2-202ENST00000406134 OR3A4PP47883 348 aa8.7□□□□□ -1.02
MSH2-202ENST00000406134 B2MP61769 119 aa8.7□□□□□ -1.02
MSH2-202ENST00000406134 SUPT4H1P63272 117 aaKnown RBP8.7□□□□□ -1.02
MSH2-202ENST00000406134 ZNF273Q14593 569 aa8.7□□□□□ -1.02
MSH2-202ENST00000406134 ZNF239Q16600 458 aaKnown RBP8.7□□□□□ -1.02
MSH2-202ENST00000406134 PHYHD1Q5SRE7 291 aa8.7□□□□□ -1.02
MSH2-202ENST00000406134 TMEM244Q5VVB8 128 aa8.7□□□□□ -1.02
MSH2-202ENST00000406134 ZNF546Q86UE3 836 aa8.7□□□□□ -1.02
MSH2-202ENST00000406134 KMT5CQ86Y97 462 aa8.7□□□□□ -1.02
MSH2-202ENST00000406134 NOXO1Q8NFA2 376 aa8.7□□□□□ -1.02
MSH2-202ENST00000406134 OR51E1Q8TCB6 317 aa8.7□□□□□ -1.02
MSH2-202ENST00000406134 PPP1R1CQ8WVI7 109 aa8.7□□□□□ -1.02
MSH2-202ENST00000406134 PCED1AQ9H1Q7 454 aa8.7□□□□□ -1.02
MSH2-202ENST00000406134 CABIN1Q9Y6J0 2220 aa8.7□□□□□ -1.02
MSH2-202ENST00000406134 A0A1W2PQM1 296 aa8.7□□□□□ -1.02
MSH2-202ENST00000406134 MEGF11A6BM72 1044 aa8.7□□□□□ -1.02
MSH2-202ENST00000406134 SNAPC5O75971 98 aa8.7□□□□□ -1.02
MSH2-202ENST00000406134 CAPZA1P52907 286 aa8.7□□□□□ -1.02
MSH2-202ENST00000406134 SMAD2Q15796 467 aaKnown RBP8.7□□□□□ -1.02
MSH2-202ENST00000406134 SCGB2B2Q4G0G5 96 aa8.7□□□□□ -1.02
MSH2-202ENST00000406134 FAM122CQ6P4D5 195 aa8.7□□□□□ -1.02
MSH2-202ENST00000406134 HOGA1Q86XE5 327 aa8.7□□□□□ -1.02
MSH2-202ENST00000406134 ZDHHC22Q8N966 263 aa8.7□□□□□ -1.02
MSH2-202ENST00000406134 NKD1Q969G9 470 aa8.7□□□□□ -1.02
MSH2-202ENST00000406134 RRNAD1Q96FB5 475 aaKnown RBP8.7□□□□□ -1.02
MSH2-202ENST00000406134 SEC22AQ96IW7 307 aa8.7□□□□□ -1.02
MSH2-202ENST00000406134 MPTX1A8MV57 137 aa8.69□□□□□ -1.02
MSH2-202ENST00000406134 H0YIZ8 118 aa8.69□□□□□ -1.02
MSH2-202ENST00000406134 TSPAN4O14817 238 aa8.69□□□□□ -1.02
MSH2-202ENST00000406134 SOCS1O15524 211 aa8.69□□□□□ -1.02
MSH2-202ENST00000406134 H2BFMP0C1H6 154 aa8.69□□□□□ -1.02
MSH2-202ENST00000406134 ZNF823P16415 610 aa8.69□□□□□ -1.02
MSH2-202ENST00000406134 LAP3P28838 519 aa8.69□□□□□ -1.02
MSH2-202ENST00000406134 NUP62P37198 522 aaPredicted RBP8.69□□□□□ -1.02
MSH2-202ENST00000406134 PPM1FP49593 454 aaPredicted RBP8.69□□□□□ -1.02
MSH2-202ENST00000406134 BTN1A1Q13410 526 aa8.69□□□□□ -1.02
MSH2-202ENST00000406134 MICBQ29980 383 aa8.69□□□□□ -1.02
MSH2-202ENST00000406134 FADS6Q8N9I5 356 aa8.69□□□□□ -1.02
MSH2-202ENST00000406134 OR2M3Q8NG83 312 aa8.69□□□□□ -1.02
MSH2-202ENST00000406134 OR13C9Q8NGT0 318 aa8.69□□□□□ -1.02
MSH2-202ENST00000406134 TMEM234Q8WY98 164 aa8.69□□□□□ -1.02
MSH2-202ENST00000406134 ROBO4Q8WZ75 1007 aa8.69□□□□□ -1.02
MSH2-202ENST00000406134 IER2Q9BTL4 223 aa8.69□□□□□ -1.02
MSH2-202ENST00000406134 RNF126Q9BV68 326 aa8.69□□□□□ -1.02
MSH2-202ENST00000406134 B3GALT5Q9Y2C3 310 aa8.69□□□□□ -1.02
MSH2-202ENST00000406134 PLEKHA6Q9Y2H5 1048 aa8.69□□□□□ -1.02
MSH2-202ENST00000406134 TRBV11-1A0A0K0K1C0 115 aa8.69□□□□□ -1.02
MSH2-202ENST00000406134 A0A1W2PNR3 127 aa8.69□□□□□ -1.02
MSH2-202ENST00000406134 D6RAR5 112 aa8.69□□□□□ -1.02
MSH2-202ENST00000406134 K7ESF4 209 aa8.69□□□□□ -1.02
MSH2-202ENST00000406134 DNASE2O00115 360 aaPredicted RBP8.69□□□□□ -1.02
MSH2-202ENST00000406134 BCL2L11O43521 198 aa8.69□□□□□ -1.02
MSH2-202ENST00000406134 CD63P08962 238 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms