RNA–Protein interactions for RNA: ENST00000403994.7

TPM1-207, Transcript of tropomyosin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TPM1, Length 1,049 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-207ENST00000403994 CCDC197Q8NCU1 140 aa12.87□□□□□ -0.35
TPM1-207ENST00000403994 OR6K6Q8NGW6 343 aa12.87□□□□□ -0.35
TPM1-207ENST00000403994 Q8TCH9 128 aa12.87□□□□□ -0.35
TPM1-207ENST00000403994 FAM216AQ8WUB2 273 aa12.87□□□□□ -0.35
TPM1-207ENST00000403994 ASB9Q96DX5 294 aa12.87□□□□□ -0.35
TPM1-207ENST00000403994 TMEM246Q9BRR3 403 aa12.87□□□□□ -0.35
TPM1-207ENST00000403994 COPS4Q9BT78 406 aa12.87□□□□□ -0.35
TPM1-207ENST00000403994 ADAT1Q9BUB4 502 aaKnown RBP12.87□□□□□ -0.35
TPM1-207ENST00000403994 SSBP3Q9BWW4 388 aaPredicted RBP12.87□□□□□ -0.35
TPM1-207ENST00000403994 PRPF19Q9UMS4 504 aaKnown RBP12.87□□□□□ -0.35
TPM1-207ENST00000403994 BAIAP2Q9UQB8 552 aa12.87□□□□□ -0.35
TPM1-207ENST00000403994 AUP1Q9Y679 476 aa12.87□□□□□ -0.35
TPM1-207ENST00000403994 RIIAD1A6NNX1 92 aa12.86□□□□□ -0.35
TPM1-207ENST00000403994 CD300LBA8K4G0 201 aa12.86□□□□□ -0.35
TPM1-207ENST00000403994 TRIM77I1YAP6 450 aa12.86□□□□□ -0.35
TPM1-207ENST00000403994 FSTL3O95633 263 aa12.86□□□□□ -0.35
TPM1-207ENST00000403994 CLUP10909 449 aa12.86□□□□□ -0.35
TPM1-207ENST00000403994 FMO3P31513 532 aa12.86□□□□□ -0.35
TPM1-207ENST00000403994 PAX2Q02962 417 aa12.86□□□□□ -0.35
TPM1-207ENST00000403994 ZNF92Q03936 586 aa12.86□□□□□ -0.35
TPM1-207ENST00000403994 TUSC1Q2TAM9 212 aa12.86□□□□□ -0.35
TPM1-207ENST00000403994 KLF17Q5JT82 389 aaPredicted RBP12.86□□□□□ -0.35
TPM1-207ENST00000403994 FAM201AQ5SY85 155 aa12.86□□□□□ -0.35
TPM1-207ENST00000403994 GLYATL3Q5SZD4 288 aa12.86□□□□□ -0.35
TPM1-207ENST00000403994 PRAMEF6Q5VXH4 476 aa12.86□□□□□ -0.35
TPM1-207ENST00000403994 DRAM2Q6UX65 266 aa12.86□□□□□ -0.35
TPM1-207ENST00000403994 C12orf54Q6X4T0 127 aa12.86□□□□□ -0.35
TPM1-207ENST00000403994 ZNF511Q8NB15 262 aa12.86□□□□□ -0.35
TPM1-207ENST00000403994 OR10G2Q8NGC3 310 aa12.86□□□□□ -0.35
TPM1-207ENST00000403994 SPRYD4Q8WW59 207 aaPredicted RBP12.86□□□□□ -0.35
TPM1-207ENST00000403994 SLAMF6Q96DU3 332 aa12.86□□□□□ -0.35
TPM1-207ENST00000403994 CLPTM1LQ96KA5 538 aa12.86□□□□□ -0.35
TPM1-207ENST00000403994 NIPSNAP1Q9BPW8 284 aa12.86□□□□□ -0.35
TPM1-207ENST00000403994 MRI1Q9BV20 369 aa12.86□□□□□ -0.35
TPM1-207ENST00000403994 TMEM165Q9HC07 324 aa12.86□□□□□ -0.35
TPM1-207ENST00000403994 MEGF8Q7Z7M0 2845 aa12.85□□□□□ -0.35
TPM1-207ENST00000403994 MGAM2Q2M2H8 2515 aa12.85□□□□□ -0.35
TPM1-207ENST00000403994 ZNF878C9JN71 531 aa12.85□□□□□ -0.35
TPM1-207ENST00000403994 FAM20BO75063 409 aa12.85□□□□□ -0.35
TPM1-207ENST00000403994 IFNGP01579 166 aa12.85□□□□□ -0.35
TPM1-207ENST00000403994 WNT2P09544 360 aa12.85□□□□□ -0.35
TPM1-207ENST00000403994 RAP2AP10114 183 aa12.85□□□□□ -0.35
TPM1-207ENST00000403994 SLC2A1P11166 492 aa12.85□□□□□ -0.35
TPM1-207ENST00000403994 ZNF3P17036 446 aa12.85□□□□□ -0.35
TPM1-207ENST00000403994 CA6P23280 308 aa12.85□□□□□ -0.35
TPM1-207ENST00000403994 CPT2P23786 658 aa12.85□□□□□ -0.35
TPM1-207ENST00000403994 COMPP49747 757 aaPredicted RBP12.85□□□□□ -0.35
TPM1-207ENST00000403994 OR8G1Q15617 311 aa12.85□□□□□ -0.35
TPM1-207ENST00000403994 CD300LDQ6UXZ3 194 aa12.85□□□□□ -0.35
TPM1-207ENST00000403994 ADGRG5Q8IZF4 528 aa12.85□□□□□ -0.35
TPM1-207ENST00000403994 IQCF1Q8N6M8 205 aa12.85□□□□□ -0.35
TPM1-207ENST00000403994 ZDHHC22Q8N966 263 aa12.85□□□□□ -0.35
TPM1-207ENST00000403994 TEX47Q8TBZ9 253 aa12.85□□□□□ -0.35
TPM1-207ENST00000403994 DACT3Q96B18 629 aaPredicted RBP12.85□□□□□ -0.35
TPM1-207ENST00000403994 NEIL1Q96FI4 390 aaPredicted RBP12.85□□□□□ -0.35
TPM1-207ENST00000403994 CMC2Q9NRP2 79 aa12.85□□□□□ -0.35
TPM1-207ENST00000403994 UFSP2Q9NUQ7 469 aa12.85□□□□□ -0.35
TPM1-207ENST00000403994 MIOXQ9UGB7 285 aa12.85□□□□□ -0.35
TPM1-207ENST00000403994 NOP16Q9Y3C1 178 aaKnown RBP12.85□□□□□ -0.35
TPM1-207ENST00000403994 IGHV2-70DA0A0C4DH43 119 aa12.84□□□□□ -0.35
TPM1-207ENST00000403994 DHRS12A0PJE2 317 aa12.84□□□□□ -0.35
TPM1-207ENST00000403994 ARRDC5A6NEK1 342 aa12.84□□□□□ -0.35
TPM1-207ENST00000403994 ZNF593O00488 134 aaPredicted RBP12.84□□□□□ -0.35
TPM1-207ENST00000403994 ACOT8O14734 319 aa12.84□□□□□ -0.35
TPM1-207ENST00000403994 FPR2P25090 351 aa12.84□□□□□ -0.35
TPM1-207ENST00000403994 CFPP27918 469 aa12.84□□□□□ -0.35
TPM1-207ENST00000403994 PITPNBP48739 271 aa12.84□□□□□ -0.35
TPM1-207ENST00000403994 PRKXP51817 358 aa12.84□□□□□ -0.35
TPM1-207ENST00000403994 GNB2P62879 340 aa12.84□□□□□ -0.35
TPM1-207ENST00000403994 HOXA4Q00056 320 aaPredicted RBP12.84□□□□□ -0.35
TPM1-207ENST00000403994 GK3PQ14409 553 aa12.84□□□□□ -0.35
TPM1-207ENST00000403994 MPPED2Q15777 294 aa12.84□□□□□ -0.35
TPM1-207ENST00000403994 TEX30Q5JUR7 227 aa12.84□□□□□ -0.35
TPM1-207ENST00000403994 LINC01590Q5TEZ4 76 aa12.84□□□□□ -0.35
TPM1-207ENST00000403994 SPATC1Q76KD6 591 aa12.84□□□□□ -0.35
TPM1-207ENST00000403994 NLRC3Q7RTR2 1065 aa12.84□□□□□ -0.35
TPM1-207ENST00000403994 SIGLECL1Q8N7X8 197 aa12.84□□□□□ -0.35
TPM1-207ENST00000403994 OR8B3Q8NGG8 313 aa12.84□□□□□ -0.35
TPM1-207ENST00000403994 OR56B2PQ8NGI1 322 aa12.84□□□□□ -0.35
TPM1-207ENST00000403994 OR11L1Q8NGX0 322 aa12.84□□□□□ -0.35
TPM1-207ENST00000403994 ERGIC1Q969X5 290 aa12.84□□□□□ -0.35
TPM1-207ENST00000403994 LRGUKQ96M69 825 aa12.84□□□□□ -0.35
TPM1-207ENST00000403994 OR8B2Q96RD0 313 aa12.84□□□□□ -0.35
TPM1-207ENST00000403994 KCNJ15Q99712 375 aa12.84□□□□□ -0.35
TPM1-207ENST00000403994 SLC22A4Q9H015 551 aa12.84□□□□□ -0.35
TPM1-207ENST00000403994 OPA3Q9H6K4 179 aa12.84□□□□□ -0.35
TPM1-207ENST00000403994 MED20Q9H944 212 aa12.84□□□□□ -0.35
TPM1-207ENST00000403994 MRPL15Q9P015 296 aaKnown RBP12.84□□□□□ -0.35
TPM1-207ENST00000403994 ZNF69Q9UC07 566 aa12.84□□□□□ -0.35
TPM1-207ENST00000403994 NUP50Q9UKX7 468 aa12.84□□□□□ -0.35
TPM1-207ENST00000403994 PPIAL4AQ9Y536 164 aa12.84□□□□□ -0.35
TPM1-207ENST00000403994 GGT3PA6NGU5 568 aa12.83□□□□□ -0.36
TPM1-207ENST00000403994 FAM183AA6NL82 134 aa12.83□□□□□ -0.36
TPM1-207ENST00000403994 PHYHO14832 338 aa12.83□□□□□ -0.36
TPM1-207ENST00000403994 GMDSO60547 372 aa12.83□□□□□ -0.36
TPM1-207ENST00000403994 PTBP3O95758 552 aaKnown RBP12.83□□□□□ -0.36
TPM1-207ENST00000403994 CST1P01037 141 aa12.83□□□□□ -0.36
TPM1-207ENST00000403994 IRF2P14316 349 aa12.83□□□□□ -0.36
TPM1-207ENST00000403994 CD80P33681 288 aa12.83□□□□□ -0.36
TPM1-207ENST00000403994 GRK5P34947 590 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms