RNA–Protein interactions for RNA: ENST00000399976.6

USP16-204, Transcript of ubiquitin specific peptidase 16, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP16, Length 2,963 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-204ENST00000399976 IZUMO2Q6UXV1 221 aa6.44□□□□□ -1.38
USP16-204ENST00000399976 TMPRSS11AQ6ZMR5 421 aa6.44□□□□□ -1.38
USP16-204ENST00000399976 HIST2H2ABQ8IUE6 130 aaPredicted RBP6.44□□□□□ -1.38
USP16-204ENST00000399976 CDH26Q8IXH8 852 aa6.44□□□□□ -1.38
USP16-204ENST00000399976 SNX33Q8WV41 574 aa6.44□□□□□ -1.38
USP16-204ENST00000399976 MS4A3Q96HJ5 214 aa6.44□□□□□ -1.38
USP16-204ENST00000399976 DMRTB1Q96MA1 342 aa6.44□□□□□ -1.38
USP16-204ENST00000399976 HEATR1Q9H583 2144 aaKnown RBP6.44□□□□□ -1.38
USP16-204ENST00000399976 SCN3BQ9NY72 215 aa6.44□□□□□ -1.38
USP16-204ENST00000399976 DNAJC27Q9NZQ0 273 aa6.44□□□□□ -1.38
USP16-204ENST00000399976 MRM2Q9UI43 246 aaKnown RBP6.44□□□□□ -1.38
USP16-204ENST00000399976 COPS3Q9UNS2 423 aa6.44□□□□□ -1.38
USP16-204ENST00000399976 SLC22A13Q9Y226 551 aa6.44□□□□□ -1.38
USP16-204ENST00000399976 PTPN13Q12923 2485 aa6.44□□□□□ -1.38
USP16-204ENST00000399976 A0A1W2PQL4 384 aaPredicted RBP6.44□□□□□ -1.38
USP16-204ENST00000399976 OGG1O15527 345 aa6.44□□□□□ -1.38
USP16-204ENST00000399976 GPRIN2O60269 458 aa6.44□□□□□ -1.38
USP16-204ENST00000399976 PLAUP00749 431 aa6.44□□□□□ -1.38
USP16-204ENST00000399976 CDK1P06493 297 aa6.44□□□□□ -1.38
USP16-204ENST00000399976 SLC25A16P16260 332 aa6.44□□□□□ -1.38
USP16-204ENST00000399976 ACHEP22303 614 aa6.44□□□□□ -1.38
USP16-204ENST00000399976 SLC3A1Q07837 685 aa6.44□□□□□ -1.38
USP16-204ENST00000399976 DYNC1I2Q13409 638 aaKnown RBP6.44□□□□□ -1.38
USP16-204ENST00000399976 TAF13Q15543 124 aa6.44□□□□□ -1.38
USP16-204ENST00000399976 UTS2BQ765I0 119 aa6.44□□□□□ -1.38
USP16-204ENST00000399976 DOK3Q7L591 496 aa6.44□□□□□ -1.38
USP16-204ENST00000399976 LINC00346Q8IVM7 164 aa6.44□□□□□ -1.38
USP16-204ENST00000399976 GALNT4Q8N4A0 578 aa6.44□□□□□ -1.38
USP16-204ENST00000399976 SLC25A40Q8TBP6 338 aa6.44□□□□□ -1.38
USP16-204ENST00000399976 RNF166Q96A37 237 aaPredicted RBP6.44□□□□□ -1.38
USP16-204ENST00000399976 TSC22D3Q99576 134 aa6.44□□□□□ -1.38
USP16-204ENST00000399976 MRPL37Q9BZE1 423 aaKnown RBP6.44□□□□□ -1.38
USP16-204ENST00000399976 TRIM36Q9NQ86 728 aa6.44□□□□□ -1.38
USP16-204ENST00000399976 DLL4Q9NR61 685 aa6.44□□□□□ -1.38
USP16-204ENST00000399976 POU2F3Q9UKI9 436 aa6.44□□□□□ -1.38
USP16-204ENST00000399976 KLHDC2Q9Y2U9 406 aa6.44□□□□□ -1.38
USP16-204ENST00000399976 LRRK2Q5S007 2527 aa6.43□□□□□ -1.38
USP16-204ENST00000399976 MAGEA13PA6NCF6 341 aa6.43□□□□□ -1.38
USP16-204ENST00000399976 TMEM212A6NML5 194 aa6.43□□□□□ -1.38
USP16-204ENST00000399976 C17orf100A8MU93 164 aa6.43□□□□□ -1.38
USP16-204ENST00000399976 SLC1A7O00341 560 aa6.43□□□□□ -1.38
USP16-204ENST00000399976 MT-ND2P03891 347 aa6.43□□□□□ -1.38
USP16-204ENST00000399976 MVKQ03426 396 aa6.43□□□□□ -1.38
USP16-204ENST00000399976 TRAM1Q15629 374 aa6.43□□□□□ -1.38
USP16-204ENST00000399976 KCTD21Q4G0X4 260 aa6.43□□□□□ -1.38
USP16-204ENST00000399976 TMEM244Q5VVB8 128 aa6.43□□□□□ -1.38
USP16-204ENST00000399976 PRSS48Q7RTY5 328 aa6.43□□□□□ -1.38
USP16-204ENST00000399976 ZNF101Q8IZC7 436 aa6.43□□□□□ -1.38
USP16-204ENST00000399976 OR51G2Q8NGK0 314 aa6.43□□□□□ -1.38
USP16-204ENST00000399976 OR13G1Q8NGZ3 307 aa6.43□□□□□ -1.38
USP16-204ENST00000399976 ABHD4Q8TB40 342 aa6.43□□□□□ -1.38
USP16-204ENST00000399976 PHYHIPQ92561 330 aa6.43□□□□□ -1.38
USP16-204ENST00000399976 UBTD1Q9HAC8 227 aa6.43□□□□□ -1.38
USP16-204ENST00000399976 DOPEY2Q9Y3R5 2298 aa6.43□□□□□ -1.38
USP16-204ENST00000399976 A0A1W2PR80 420 aa6.43□□□□□ -1.38
USP16-204ENST00000399976 DAPL1A0PJW8 107 aa6.43□□□□□ -1.38
USP16-204ENST00000399976 VWC2LB2RUY7 222 aa6.43□□□□□ -1.38
USP16-204ENST00000399976 SOD3P08294 240 aa6.43□□□□□ -1.38
USP16-204ENST00000399976 PATE4P0C8F1 98 aa6.43□□□□□ -1.38
USP16-204ENST00000399976 LIMS3P0CW19 117 aa6.43□□□□□ -1.38
USP16-204ENST00000399976 LIMS4P0CW20 117 aa6.43□□□□□ -1.38
USP16-204ENST00000399976 TNFSF4P23510 183 aa6.43□□□□□ -1.38
USP16-204ENST00000399976 PSMA1P25786 263 aaKnown RBP6.43□□□□□ -1.38
USP16-204ENST00000399976 COL8A1P27658 744 aa6.43□□□□□ -1.38
USP16-204ENST00000399976 ZNF121P58317 390 aaPredicted RBP6.43□□□□□ -1.38
USP16-204ENST00000399976 TBCEQ15813 527 aaPredicted RBP6.43□□□□□ -1.38
USP16-204ENST00000399976 FAM76BQ5HYJ3 339 aa6.43□□□□□ -1.38
USP16-204ENST00000399976 RPL22L1Q6P5R6 122 aaKnown RBP6.43□□□□□ -1.38
USP16-204ENST00000399976 KLHL36Q8N4N3 616 aa6.43□□□□□ -1.38
USP16-204ENST00000399976 ZNF540Q8NDQ6 660 aa6.43□□□□□ -1.38
USP16-204ENST00000399976 OR10Z1Q8NGY1 313 aa6.43□□□□□ -1.38
USP16-204ENST00000399976 FCGR1BQ92637 280 aa6.43□□□□□ -1.38
USP16-204ENST00000399976 GGHQ92820 318 aa6.43□□□□□ -1.38
USP16-204ENST00000399976 HPS1Q92902 700 aa6.43□□□□□ -1.38
USP16-204ENST00000399976 POM121Q96HA1 1249 aa6.43□□□□□ -1.38
USP16-204ENST00000399976 AMELYQ99218 206 aa6.43□□□□□ -1.38
USP16-204ENST00000399976 DHRS3O75911 302 aa6.42□□□□□ -1.38
USP16-204ENST00000399976 GPANK1O95872 356 aa6.42□□□□□ -1.38
USP16-204ENST00000399976 MYL12AP19105 171 aa6.42□□□□□ -1.38
USP16-204ENST00000399976 MAP2K3P46734 347 aa6.42□□□□□ -1.38
USP16-204ENST00000399976 FAM3AP98173 230 aa6.42□□□□□ -1.38
USP16-204ENST00000399976 PSG7Q13046 419 aa6.42□□□□□ -1.38
USP16-204ENST00000399976 GK2Q14410 553 aaPredicted RBP6.42□□□□□ -1.38
USP16-204ENST00000399976 GLYATL3Q5SZD4 288 aa6.42□□□□□ -1.38
USP16-204ENST00000399976 ZNF786Q8N393 782 aa6.42□□□□□ -1.38
USP16-204ENST00000399976 ZNF283Q8N7M2 679 aa6.42□□□□□ -1.38
USP16-204ENST00000399976 DNAAF1Q8NEP3 725 aa6.42□□□□□ -1.38
USP16-204ENST00000399976 THEM6Q8WUY1 208 aa6.42□□□□□ -1.38
USP16-204ENST00000399976 PP6455Q8WZ26 134 aa6.42□□□□□ -1.38
USP16-204ENST00000399976 ALG8Q9BVK2 526 aa6.42□□□□□ -1.38
USP16-204ENST00000399976 MND1Q9BWT6 205 aa6.42□□□□□ -1.38
USP16-204ENST00000399976 EGLN1Q9GZT9 426 aa6.42□□□□□ -1.38
USP16-204ENST00000399976 PBOV1Q9GZY1 135 aa6.42□□□□□ -1.38
USP16-204ENST00000399976 SCOCQ9UIL1 159 aa6.42□□□□□ -1.38
USP16-204ENST00000399976 STARD10Q9Y365 291 aa6.42□□□□□ -1.38
USP16-204ENST00000399976 ARFGEF3Q5TH69 2177 aa6.42□□□□□ -1.38
USP16-204ENST00000399976 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.42□□□□□ -1.38
USP16-204ENST00000399976 OR5B21A6NL26 309 aa6.42□□□□□ -1.38
USP16-204ENST00000399976 TRIM64CA6NLI5 447 aa6.42□□□□□ -1.38
USP16-204ENST00000399976 LOC110117498-PIK3R3F6TDL0 507 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms