RNA–Protein interactions for RNA: ENST00000399638.5

CACNA1C-216, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,595 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-216ENST00000399638 DND1Q8IYX4 353 aaKnown RBP9.96□□□□□ -0.81
CACNA1C-216ENST00000399638 C3orf30Q96M34 536 aa9.96□□□□□ -0.81
CACNA1C-216ENST00000399638 IGSF5Q9NSI5 407 aa9.96□□□□□ -0.81
CACNA1C-216ENST00000399638 UFC1Q9Y3C8 167 aa9.96□□□□□ -0.81
CACNA1C-216ENST00000399638 CORINQ9Y5Q5 1042 aa9.96□□□□□ -0.81
CACNA1C-216ENST00000399638 FBLL1A6NHQ2 334 aaKnown RBP9.96□□□□□ -0.82
CACNA1C-216ENST00000399638 TGOLN2O43493 480 aa9.96□□□□□ -0.82
CACNA1C-216ENST00000399638 POU3F3P20264 500 aaPredicted RBP9.96□□□□□ -0.82
CACNA1C-216ENST00000399638 COL5A1-AS1Q5SY13 56 aa9.96□□□□□ -0.82
CACNA1C-216ENST00000399638 MEPCEQ7L2J0 689 aaKnown RBP9.96□□□□□ -0.82
CACNA1C-216ENST00000399638 OR2G2Q8NGZ5 317 aa9.96□□□□□ -0.82
CACNA1C-216ENST00000399638 OR51F2Q8NH61 342 aa9.96□□□□□ -0.82
CACNA1C-216ENST00000399638 ATP5SQ99766 215 aa9.96□□□□□ -0.82
CACNA1C-216ENST00000399638 GHITMQ9H3K2 345 aa9.96□□□□□ -0.82
CACNA1C-216ENST00000399638 ZCCHC4Q9H5U6 513 aa9.96□□□□□ -0.82
CACNA1C-216ENST00000399638 YAE1D1Q9NRH1 226 aa9.96□□□□□ -0.82
CACNA1C-216ENST00000399638 NECAP2Q9NVZ3 263 aa9.96□□□□□ -0.82
CACNA1C-216ENST00000399638 MED9Q9NWA0 146 aa9.96□□□□□ -0.82
CACNA1C-216ENST00000399638 TMEM72A0PK05 275 aa9.96□□□□□ -0.82
CACNA1C-216ENST00000399638 SELENBP1Q13228 472 aa9.96□□□□□ -0.82
CACNA1C-216ENST00000399638 Q3ZCU0 254 aa9.96□□□□□ -0.82
CACNA1C-216ENST00000399638 ZNF546Q86UE3 836 aa9.96□□□□□ -0.82
CACNA1C-216ENST00000399638 ZDHHC23Q8IYP9 409 aa9.96□□□□□ -0.82
CACNA1C-216ENST00000399638 ZNF740Q8NDX6 193 aa9.96□□□□□ -0.82
CACNA1C-216ENST00000399638 RDH5Q92781 318 aa9.96□□□□□ -0.82
CACNA1C-216ENST00000399638 PLPPR2Q96GM1 343 aa9.96□□□□□ -0.82
CACNA1C-216ENST00000399638 PIMREGQ9BSJ6 248 aa9.96□□□□□ -0.82
CACNA1C-216ENST00000399638 PCGF1Q9BSM1 259 aa9.96□□□□□ -0.82
CACNA1C-216ENST00000399638 GAR1Q9NY12 217 aaKnown RBP9.96□□□□□ -0.82
CACNA1C-216ENST00000399638 IGHV3OR16-12A0A075B7B8 117 aa9.96□□□□□ -0.82
CACNA1C-216ENST00000399638 IGKV3D-11A0A0A0MRZ8 115 aa9.96□□□□□ -0.82
CACNA1C-216ENST00000399638 DFFBO76075 338 aa9.96□□□□□ -0.82
CACNA1C-216ENST00000399638 IGKV3-11P04433 115 aa9.96□□□□□ -0.82
CACNA1C-216ENST00000399638 CEACAM3P40198 252 aa9.96□□□□□ -0.82
CACNA1C-216ENST00000399638 SPCS2Q15005 226 aa9.96□□□□□ -0.82
CACNA1C-216ENST00000399638 VMA21Q3ZAQ7 101 aa9.96□□□□□ -0.82
CACNA1C-216ENST00000399638 PYCR3Q53H96 274 aa9.96□□□□□ -0.82
CACNA1C-216ENST00000399638 PAGE3Q5JUK9 113 aa9.96□□□□□ -0.82
CACNA1C-216ENST00000399638 TMEM88Q6PEY1 159 aa9.96□□□□□ -0.82
CACNA1C-216ENST00000399638 OR52A5Q9H2C5 316 aa9.96□□□□□ -0.82
CACNA1C-216ENST00000399638 IGKV3D-15A0A087WSY6 115 aa9.95□□□□□ -0.82
CACNA1C-216ENST00000399638 IGKV3-15P01624 115 aa9.95□□□□□ -0.82
CACNA1C-216ENST00000399638 CAPZBP47756 277 aa9.95□□□□□ -0.82
CACNA1C-216ENST00000399638 ALKAL2Q6UX46 152 aa9.95□□□□□ -0.82
CACNA1C-216ENST00000399638 OR1S2Q8NGQ3 325 aa9.95□□□□□ -0.82
CACNA1C-216ENST00000399638 GPR150Q8NGU9 434 aa9.95□□□□□ -0.82
CACNA1C-216ENST00000399638 OR2AE1Q8NHA4 323 aa9.95□□□□□ -0.82
CACNA1C-216ENST00000399638 OLIG1Q8TAK6 271 aa9.95□□□□□ -0.82
CACNA1C-216ENST00000399638 ZNF300Q96RE9 604 aaPredicted RBP9.95□□□□□ -0.82
CACNA1C-216ENST00000399638 CSF3RQ99062 836 aa9.95□□□□□ -0.82
CACNA1C-216ENST00000399638 COX7A2P2O60397 106 aa9.95□□□□□ -0.82
CACNA1C-216ENST00000399638 GABRG2P18507 467 aa9.95□□□□□ -0.82
CACNA1C-216ENST00000399638 TACR1P25103 407 aa9.95□□□□□ -0.82
CACNA1C-216ENST00000399638 PTBP1P26599 531 aaKnown RBP eCLIP9.95□□□□□ -0.82
CACNA1C-216ENST00000399638 TPPP2P59282 170 aa9.95□□□□□ -0.82
CACNA1C-216ENST00000399638 PAFAH1B2P68402 229 aa9.95□□□□□ -0.82
CACNA1C-216ENST00000399638 REEP5Q00765 189 aa9.95□□□□□ -0.82
CACNA1C-216ENST00000399638 ZNF91Q05481 1191 aa9.95□□□□□ -0.82
CACNA1C-216ENST00000399638 RNASEKQ6P5S7 137 aaKnown RBP9.95□□□□□ -0.82
CACNA1C-216ENST00000399638 HIST2H3AQ71DI3 136 aa9.95□□□□□ -0.82
CACNA1C-216ENST00000399638 ADAT1Q9BUB4 502 aaKnown RBP9.95□□□□□ -0.82
CACNA1C-216ENST00000399638 CBY1Q9Y3M2 126 aa9.95□□□□□ -0.82
CACNA1C-216ENST00000399638 TOGARAM1Q9Y4F4 1720 aa9.95□□□□□ -0.82
CACNA1C-216ENST00000399638 ANKRD36CQ5JPF3 1778 aa9.95□□□□□ -0.82
CACNA1C-216ENST00000399638 MGPP08493 103 aa9.95□□□□□ -0.82
CACNA1C-216ENST00000399638 EMX1Q04741 257 aaPredicted RBP9.95□□□□□ -0.82
CACNA1C-216ENST00000399638 KIAA0141Q14154 515 aaPredicted RBP9.95□□□□□ -0.82
CACNA1C-216ENST00000399638 RBPMS2Q6ZRY4 209 aaKnown RBP9.95□□□□□ -0.82
CACNA1C-216ENST00000399638 OR4M1Q8NGD0 313 aa9.95□□□□□ -0.82
CACNA1C-216ENST00000399638 HS3ST2Q9Y278 367 aa9.95□□□□□ -0.82
CACNA1C-216ENST00000399638 PRRT4C9JH25 899 aa9.95□□□□□ -0.82
CACNA1C-216ENST00000399638 ICOSLGO75144 302 aa9.95□□□□□ -0.82
CACNA1C-216ENST00000399638 CPN1P15169 458 aa9.95□□□□□ -0.82
CACNA1C-216ENST00000399638 NFYAP23511 347 aaPredicted RBP9.95□□□□□ -0.82
CACNA1C-216ENST00000399638 PIGAP37287 484 aa9.95□□□□□ -0.82
CACNA1C-216ENST00000399638 NHLH1Q02575 133 aa9.95□□□□□ -0.82
CACNA1C-216ENST00000399638 NHLH2Q02577 135 aa9.95□□□□□ -0.82
CACNA1C-216ENST00000399638 NUMA1Q14980 2115 aa9.95□□□□□ -0.82
CACNA1C-216ENST00000399638 COL19A1Q14993 1142 aa9.95□□□□□ -0.82
CACNA1C-216ENST00000399638 ACSM6Q6P461 480 aa9.95□□□□□ -0.82
CACNA1C-216ENST00000399638 LSRQ86X29 649 aaPredicted RBP9.95□□□□□ -0.82
CACNA1C-216ENST00000399638 CADM3Q8N126 398 aa9.95□□□□□ -0.82
CACNA1C-216ENST00000399638 OR2T35Q8NGX2 323 aa9.95□□□□□ -0.82
CACNA1C-216ENST00000399638 NEURL2Q9BR09 285 aa9.95□□□□□ -0.82
CACNA1C-216ENST00000399638 LRRC61Q9BV99 259 aa9.95□□□□□ -0.82
CACNA1C-216ENST00000399638 RYDENQ9NUL5 291 aaKnown RBP9.95□□□□□ -0.82
CACNA1C-216ENST00000399638 FBXL2Q9UKC9 423 aa9.95□□□□□ -0.82
CACNA1C-216ENST00000399638 UBR2Q8IWV8 1755 aa9.95□□□□□ -0.82
CACNA1C-216ENST00000399638 OR4C46A6NHA9 309 aa9.95□□□□□ -0.82
CACNA1C-216ENST00000399638 B4GALT1P15291 398 aa9.95□□□□□ -0.82
CACNA1C-216ENST00000399638 ST6GAL1P15907 406 aa9.95□□□□□ -0.82
CACNA1C-216ENST00000399638 KLF3P57682 345 aaPredicted RBP9.95□□□□□ -0.82
CACNA1C-216ENST00000399638 BPIFB3P59826 476 aa9.95□□□□□ -0.82
CACNA1C-216ENST00000399638 SELENOWP63302 87 aa9.95□□□□□ -0.82
CACNA1C-216ENST00000399638 ZBTB8AQ96BR9 441 aa9.95□□□□□ -0.82
CACNA1C-216ENST00000399638 ZNF416Q9BWM5 594 aa9.95□□□□□ -0.82
CACNA1C-216ENST00000399638 HAPLN2Q9GZV7 340 aa9.95□□□□□ -0.82
CACNA1C-216ENST00000399638 S1PR5Q9H228 398 aa9.95□□□□□ -0.82
CACNA1C-216ENST00000399638 OR51E2Q9H255 320 aa9.95□□□□□ -0.82
CACNA1C-216ENST00000399638 WSB2Q9NYS7 404 aaPredicted RBP9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms