RNA–Protein interactions for RNA: ENST00000398729.1

VCX3A-202, Transcript of variable charge X-linked 3A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3A, Length 808 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-202ENST00000398729 CANT1Q8WVQ1 401 aa11.27□□□□□ -0.61
VCX3A-202ENST00000398729 FEVQ99581 238 aa11.27□□□□□ -0.61
VCX3A-202ENST00000398729 NMNAT2Q9BZQ4 307 aa11.27□□□□□ -0.61
VCX3A-202ENST00000398729 CMC2Q9NRP2 79 aa11.27□□□□□ -0.61
VCX3A-202ENST00000398729 CENPMQ9NSP4 180 aa11.27□□□□□ -0.61
VCX3A-202ENST00000398729 NOP16Q9Y3C1 178 aaKnown RBP11.27□□□□□ -0.61
VCX3A-202ENST00000398729 CMYA5Q8N3K9 4069 aa11.26□□□□□ -0.61
VCX3A-202ENST00000398729 IGHV3-64DA0A0J9YX35 117 aa11.26□□□□□ -0.61
VCX3A-202ENST00000398729 ZNF878C9JN71 531 aa11.26□□□□□ -0.61
VCX3A-202ENST00000398729 F5H0A9 414 aaPredicted RBP11.26□□□□□ -0.61
VCX3A-202ENST00000398729 GYG2O15488 501 aa11.26□□□□□ -0.61
VCX3A-202ENST00000398729 CYB5R3P00387 301 aaPredicted RBP11.26□□□□□ -0.61
VCX3A-202ENST00000398729 CLUP10909 449 aa11.26□□□□□ -0.61
VCX3A-202ENST00000398729 PSKH1P11801 424 aa11.26□□□□□ -0.61
VCX3A-202ENST00000398729 IRF2P14316 349 aa11.26□□□□□ -0.61
VCX3A-202ENST00000398729 ADRA2CP18825 462 aa11.26□□□□□ -0.61
VCX3A-202ENST00000398729 CPT2P23786 658 aa11.26□□□□□ -0.61
VCX3A-202ENST00000398729 ZFP36P26651 326 aaKnown RBP11.26□□□□□ -0.61
VCX3A-202ENST00000398729 GRK5P34947 590 aa11.26□□□□□ -0.61
VCX3A-202ENST00000398729 GATA4P43694 442 aa11.26□□□□□ -0.61
VCX3A-202ENST00000398729 RAD23AP54725 363 aa11.26□□□□□ -0.61
VCX3A-202ENST00000398729 SNAI3Q3KNW1 292 aa11.26□□□□□ -0.61
VCX3A-202ENST00000398729 TEX30Q5JUR7 227 aa11.26□□□□□ -0.61
VCX3A-202ENST00000398729 CELF2-AS1Q8N7Q2 184 aa11.26□□□□□ -0.61
VCX3A-202ENST00000398729 BCAS4Q8TDM0 211 aa11.26□□□□□ -0.61
VCX3A-202ENST00000398729 SLAMF6Q96DU3 332 aa11.26□□□□□ -0.61
VCX3A-202ENST00000398729 KCNJ15Q99712 375 aa11.26□□□□□ -0.61
VCX3A-202ENST00000398729 SLC22A4Q9H015 551 aa11.26□□□□□ -0.61
VCX3A-202ENST00000398729 POLR3KQ9Y2Y1 108 aaPredicted RBP11.26□□□□□ -0.61
VCX3A-202ENST00000398729 ARHGAP32A7KAX9 2087 aa11.26□□□□□ -0.61
VCX3A-202ENST00000398729 WNK2Q9Y3S1 2297 aa11.25□□□□□ -0.61
VCX3A-202ENST00000398729 GGT3PA6NGU5 568 aa11.25□□□□□ -0.61
VCX3A-202ENST00000398729 CD300LBA8K4G0 201 aa11.25□□□□□ -0.61
VCX3A-202ENST00000398729 CEACAM18A8MTB9 384 aa11.25□□□□□ -0.61
VCX3A-202ENST00000398729 A8MXK9 166 aa11.25□□□□□ -0.61
VCX3A-202ENST00000398729 E2F6O75461 281 aa11.25□□□□□ -0.61
VCX3A-202ENST00000398729 ZNF205O95201 554 aa11.25□□□□□ -0.61
VCX3A-202ENST00000398729 FSTL3O95633 263 aa11.25□□□□□ -0.61
VCX3A-202ENST00000398729 PAICSP22234 425 aaKnown RBP11.25□□□□□ -0.61
VCX3A-202ENST00000398729 SLC15A1P46059 708 aa11.25□□□□□ -0.61
VCX3A-202ENST00000398729 PRKXP51817 358 aa11.25□□□□□ -0.61
VCX3A-202ENST00000398729 SEC61A1P61619 476 aaKnown RBP11.25□□□□□ -0.61
VCX3A-202ENST00000398729 ZNF92Q03936 586 aa11.25□□□□□ -0.61
VCX3A-202ENST00000398729 MAB21L1Q13394 359 aa11.25□□□□□ -0.61
VCX3A-202ENST00000398729 FLOT2Q14254 428 aa11.25□□□□□ -0.61
VCX3A-202ENST00000398729 OR8G1Q15617 311 aa11.25□□□□□ -0.61
VCX3A-202ENST00000398729 GLYATL3Q5SZD4 288 aa11.25□□□□□ -0.61
VCX3A-202ENST00000398729 USP43Q70EL4 1123 aa11.25□□□□□ -0.61
VCX3A-202ENST00000398729 SPATA24Q86W54 205 aa11.25□□□□□ -0.61
VCX3A-202ENST00000398729 IQCF1Q8N6M8 205 aa11.25□□□□□ -0.61
VCX3A-202ENST00000398729 SEMA6DQ8NFY4 1073 aa11.25□□□□□ -0.61
VCX3A-202ENST00000398729 OR11L1Q8NGX0 322 aa11.25□□□□□ -0.61
VCX3A-202ENST00000398729 ZFAND2BQ8WV99 257 aa11.25□□□□□ -0.61
VCX3A-202ENST00000398729 ERGIC1Q969X5 290 aa11.25□□□□□ -0.61
VCX3A-202ENST00000398729 OTULINQ96BN8 352 aa11.25□□□□□ -0.61
VCX3A-202ENST00000398729 JMJD8Q96S16 334 aa11.25□□□□□ -0.61
VCX3A-202ENST00000398729 INTS14Q96SY0 518 aa11.25□□□□□ -0.61
VCX3A-202ENST00000398729 OPA3Q9H6K4 179 aa11.25□□□□□ -0.61
VCX3A-202ENST00000398729 YY1AP1Q9H869 796 aa11.25□□□□□ -0.61
VCX3A-202ENST00000398729 ZNF556Q9HAH1 456 aa11.25□□□□□ -0.61
VCX3A-202ENST00000398729 MMP26Q9NRE1 261 aa11.25□□□□□ -0.61
VCX3A-202ENST00000398729 PDP1Q9P0J1 537 aaPredicted RBP11.25□□□□□ -0.61
VCX3A-202ENST00000398729 MIOXQ9UGB7 285 aa11.25□□□□□ -0.61
VCX3A-202ENST00000398729 OR5V1Q9UGF6 321 aa11.25□□□□□ -0.61
VCX3A-202ENST00000398729 OPN4Q9UHM6 478 aa11.25□□□□□ -0.61
VCX3A-202ENST00000398729 LRCH1Q9Y2L9 728 aa11.25□□□□□ -0.61
VCX3A-202ENST00000398729 FAM183AA6NL82 134 aa11.24□□□□□ -0.61
VCX3A-202ENST00000398729 TRAPPC2LH3BP13 241 aa11.24□□□□□ -0.61
VCX3A-202ENST00000398729 RGS9O75916 674 aaPredicted RBP11.24□□□□□ -0.61
VCX3A-202ENST00000398729 WNT2P09544 360 aa11.24□□□□□ -0.61
VCX3A-202ENST00000398729 RPS2P15880 293 aaKnown RBP11.24□□□□□ -0.61
VCX3A-202ENST00000398729 CA6P23280 308 aa11.24□□□□□ -0.61
VCX3A-202ENST00000398729 POU1F1P28069 291 aa11.24□□□□□ -0.61
VCX3A-202ENST00000398729 PMELP40967 661 aa11.24□□□□□ -0.61
VCX3A-202ENST00000398729 CD200P41217 278 aa11.24□□□□□ -0.61
VCX3A-202ENST00000398729 GRB2P62993 217 aaKnown RBP11.24□□□□□ -0.61
VCX3A-202ENST00000398729 ZNF154Q13106 437 aa11.24□□□□□ -0.61
VCX3A-202ENST00000398729 EIF2B1Q14232 305 aaKnown RBP11.24□□□□□ -0.61
VCX3A-202ENST00000398729 LINC01590Q5TEZ4 76 aa11.24□□□□□ -0.61
VCX3A-202ENST00000398729 TMEM179BQ7Z7N9 219 aa11.24□□□□□ -0.61
VCX3A-202ENST00000398729 ERI1Q8IV48 349 aaKnown RBP11.24□□□□□ -0.61
VCX3A-202ENST00000398729 DEFB108BQ8NET1 73 aa11.24□□□□□ -0.61
VCX3A-202ENST00000398729 OR6N2Q8NGY6 317 aa11.24□□□□□ -0.61
VCX3A-202ENST00000398729 OR2AE1Q8NHA4 323 aa11.24□□□□□ -0.61
VCX3A-202ENST00000398729 Q8TCH9 128 aa11.24□□□□□ -0.61
VCX3A-202ENST00000398729 PLEKHA8Q96JA3 519 aa11.24□□□□□ -0.61
VCX3A-202ENST00000398729 ADAT1Q9BUB4 502 aaKnown RBP11.24□□□□□ -0.61
VCX3A-202ENST00000398729 MRI1Q9BV20 369 aa11.24□□□□□ -0.61
VCX3A-202ENST00000398729 SSBP3Q9BWW4 388 aaPredicted RBP11.24□□□□□ -0.61
VCX3A-202ENST00000398729 SUCNR1Q9BXA5 334 aa11.24□□□□□ -0.61
VCX3A-202ENST00000398729 TOR3AQ9H497 397 aa11.24□□□□□ -0.61
VCX3A-202ENST00000398729 MED20Q9H944 212 aa11.24□□□□□ -0.61
VCX3A-202ENST00000398729 TMEM165Q9HC07 324 aa11.24□□□□□ -0.61
VCX3A-202ENST00000398729 MRPL15Q9P015 296 aaKnown RBP11.24□□□□□ -0.61
VCX3A-202ENST00000398729 PPIAL4AQ9Y536 164 aa11.24□□□□□ -0.61
VCX3A-202ENST00000398729 N6AMT1Q9Y5N5 214 aa11.24□□□□□ -0.61
VCX3A-202ENST00000398729 INSIG2Q9Y5U4 225 aa11.24□□□□□ -0.61
VCX3A-202ENST00000398729 AUP1Q9Y679 476 aa11.24□□□□□ -0.61
VCX3A-202ENST00000398729 XRCC2O43543 280 aa11.23□□□□□ -0.61
VCX3A-202ENST00000398729 GMDSO60547 372 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms