RNA–Protein interactions for RNA: ENST00000398587.6

PCDHGA11-201, Transcript of protocadherin gamma subfamily A, 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA11, Length 4,647 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11-201ENST00000398587 SARGQ9BW04 601 aa12.78□□□□□ -0.36
PCDHGA11-201ENST00000398587 A0A1B0GTQ1 180 aa12.77□□□□□ -0.36
PCDHGA11-201ENST00000398587 CCSO14618 274 aa12.77□□□□□ -0.36
PCDHGA11-201ENST00000398587 SPINT2O43291 252 aa12.77□□□□□ -0.36
PCDHGA11-201ENST00000398587 IL2RAP01589 272 aa12.77□□□□□ -0.36
PCDHGA11-201ENST00000398587 PRKACAP17612 351 aa12.77□□□□□ -0.36
PCDHGA11-201ENST00000398587 FCARP24071 287 aa12.77□□□□□ -0.36
PCDHGA11-201ENST00000398587 SLC37A1P57057 533 aa12.77□□□□□ -0.36
PCDHGA11-201ENST00000398587 ACER2Q5QJU3 275 aa12.77□□□□□ -0.36
PCDHGA11-201ENST00000398587 ZAR1Q86SH2 424 aa12.77□□□□□ -0.36
PCDHGA11-201ENST00000398587 ATG4DQ86TL0 474 aaPredicted RBP12.77□□□□□ -0.36
PCDHGA11-201ENST00000398587 ZNF573Q86YE8 665 aa12.77□□□□□ -0.36
PCDHGA11-201ENST00000398587 OR5AS1Q8N127 324 aa12.77□□□□□ -0.36
PCDHGA11-201ENST00000398587 PCNPQ8WW12 178 aaKnown RBP12.77□□□□□ -0.36
PCDHGA11-201ENST00000398587 TAS2R5Q9NYW4 299 aa12.77□□□□□ -0.36
PCDHGA11-201ENST00000398587 FLVCR2Q9UPI3 526 aa12.77□□□□□ -0.36
PCDHGA11-201ENST00000398587 LOC285556D6RIA3 1793 aa12.77□□□□□ -0.36
PCDHGA11-201ENST00000398587 IGKV1-8A0A0C4DH67 115 aa12.77□□□□□ -0.36
PCDHGA11-201ENST00000398587 A0A1W2PPV4 95 aa12.77□□□□□ -0.36
PCDHGA11-201ENST00000398587 MGMTP16455 207 aa12.77□□□□□ -0.36
PCDHGA11-201ENST00000398587 LUMP51884 338 aaPredicted RBP12.77□□□□□ -0.36
PCDHGA11-201ENST00000398587 MVDP53602 400 aa12.77□□□□□ -0.36
PCDHGA11-201ENST00000398587 OR8G1Q15617 311 aa12.77□□□□□ -0.36
PCDHGA11-201ENST00000398587 EXD3Q8N9H8 876 aa12.77□□□□□ -0.36
PCDHGA11-201ENST00000398587 SUMF2Q8NBJ7 301 aa12.77□□□□□ -0.36
PCDHGA11-201ENST00000398587 C17orf47Q8NEP4 570 aa12.77□□□□□ -0.36
PCDHGA11-201ENST00000398587 CNTNAP3Q9BZ76 1288 aa12.77□□□□□ -0.36
PCDHGA11-201ENST00000398587 PLEKHF2Q9H8W4 249 aa12.77□□□□□ -0.36
PCDHGA11-201ENST00000398587 ICAM5Q9UMF0 924 aa12.77□□□□□ -0.36
PCDHGA11-201ENST00000398587 PTPRFP10586 1907 aa12.77□□□□□ -0.37
PCDHGA11-201ENST00000398587 PLPP3O14495 311 aa12.77□□□□□ -0.37
PCDHGA11-201ENST00000398587 TFF2Q03403 129 aa12.77□□□□□ -0.37
PCDHGA11-201ENST00000398587 TMUB2Q71RG4 321 aa12.77□□□□□ -0.37
PCDHGA11-201ENST00000398587 OR4C16Q8NGL9 310 aa12.77□□□□□ -0.37
PCDHGA11-201ENST00000398587 ZNF2Q9BSG1 426 aaPredicted RBP12.77□□□□□ -0.37
PCDHGA11-201ENST00000398587 DUSP15Q9H1R2 295 aaPredicted RBP12.77□□□□□ -0.37
PCDHGA11-201ENST00000398587 RPS10P5Q9NQ39 176 aa12.77□□□□□ -0.37
PCDHGA11-201ENST00000398587 SLC17A5Q9NRA2 495 aa12.77□□□□□ -0.37
PCDHGA11-201ENST00000398587 FOXS1O43638 330 aa12.77□□□□□ -0.37
PCDHGA11-201ENST00000398587 PTGER4P35408 488 aa12.77□□□□□ -0.37
PCDHGA11-201ENST00000398587 CD79BP40259 229 aa12.77□□□□□ -0.37
PCDHGA11-201ENST00000398587 RPS23P62266 143 aaKnown RBP12.77□□□□□ -0.37
PCDHGA11-201ENST00000398587 ZNF266Q14584 549 aa12.77□□□□□ -0.37
PCDHGA11-201ENST00000398587 INSL4Q14641 139 aa12.77□□□□□ -0.37
PCDHGA11-201ENST00000398587 SVBPQ8N300 66 aa12.77□□□□□ -0.37
PCDHGA11-201ENST00000398587 DMBX1Q8NFW5 382 aa12.77□□□□□ -0.37
PCDHGA11-201ENST00000398587 TPRP12270 2363 aaKnown RBP12.77□□□□□ -0.37
PCDHGA11-201ENST00000398587 ZDBF2Q9HCK1 2354 aa12.77□□□□□ -0.37
PCDHGA11-201ENST00000398587 RGS11O94810 467 aa12.76□□□□□ -0.37
PCDHGA11-201ENST00000398587 SERPINA7P05543 415 aa12.76□□□□□ -0.37
PCDHGA11-201ENST00000398587 EDN3P14138 238 aa12.76□□□□□ -0.37
PCDHGA11-201ENST00000398587 CTLA4P16410 223 aa12.76□□□□□ -0.37
PCDHGA11-201ENST00000398587 GNB3P16520 340 aa12.76□□□□□ -0.37
PCDHGA11-201ENST00000398587 FAHP16930 419 aa12.76□□□□□ -0.37
PCDHGA11-201ENST00000398587 F2RL1P55085 397 aa12.76□□□□□ -0.37
PCDHGA11-201ENST00000398587 ISXQ2M1V0 245 aa12.76□□□□□ -0.37
PCDHGA11-201ENST00000398587 SFRP5Q5T4F7 317 aa12.76□□□□□ -0.37
PCDHGA11-201ENST00000398587 DHRS13Q6UX07 377 aa12.76□□□□□ -0.37
PCDHGA11-201ENST00000398587 LSRQ86X29 649 aaPredicted RBP12.76□□□□□ -0.37
PCDHGA11-201ENST00000398587 OR5T1Q8NG75 326 aa12.76□□□□□ -0.37
PCDHGA11-201ENST00000398587 OR2AK2Q8NG84 335 aa12.76□□□□□ -0.37
PCDHGA11-201ENST00000398587 OR2I1PQ8NGU4 316 aa12.76□□□□□ -0.37
PCDHGA11-201ENST00000398587 OR10J5Q8NHC4 309 aa12.76□□□□□ -0.37
PCDHGA11-201ENST00000398587 AKR7LQ8NHP1 331 aa12.76□□□□□ -0.37
PCDHGA11-201ENST00000398587 SCARB1Q8WTV0 552 aa12.76□□□□□ -0.37
PCDHGA11-201ENST00000398587 TMEM100Q9NV29 134 aa12.76□□□□□ -0.37
PCDHGA11-201ENST00000398587 MYOFQ9NZM1 2061 aa12.76□□□□□ -0.37
PCDHGA11-201ENST00000398587 SLC22A20A6NK97 555 aa12.76□□□□□ -0.37
PCDHGA11-201ENST00000398587 SDCBPO00560 298 aaPredicted RBP12.76□□□□□ -0.37
PCDHGA11-201ENST00000398587 ST8SIA3O43173 380 aa12.76□□□□□ -0.37
PCDHGA11-201ENST00000398587 OPRM1P35372 400 aa12.76□□□□□ -0.37
PCDHGA11-201ENST00000398587 PDLIM3Q53GG5 364 aaPredicted RBP12.76□□□□□ -0.37
PCDHGA11-201ENST00000398587 ESCO2Q56NI9 601 aa12.76□□□□□ -0.37
PCDHGA11-201ENST00000398587 SLC22A25Q6T423 547 aa12.76□□□□□ -0.37
PCDHGA11-201ENST00000398587 DTWD2Q8NBA8 298 aa12.76□□□□□ -0.37
PCDHGA11-201ENST00000398587 CDX2Q99626 313 aaPredicted RBP12.76□□□□□ -0.37
PCDHGA11-201ENST00000398587 ZFP64Q9NPA5 681 aa12.76□□□□□ -0.37
PCDHGA11-201ENST00000398587 PRELID3BQ9Y3B1 194 aa12.76□□□□□ -0.37
PCDHGA11-201ENST00000398587 PIKFYVEQ9Y2I7 2098 aa12.76□□□□□ -0.37
PCDHGA11-201ENST00000398587 ZNF816-ZNF321PA0A0X1KG74 233 aa12.76□□□□□ -0.37
PCDHGA11-201ENST00000398587 HRKO00198 91 aa12.76□□□□□ -0.37
PCDHGA11-201ENST00000398587 HYAL3O43820 417 aaPredicted RBP12.76□□□□□ -0.37
PCDHGA11-201ENST00000398587 TUSC2O75896 110 aa12.76□□□□□ -0.37
PCDHGA11-201ENST00000398587 GLAP06280 429 aa12.76□□□□□ -0.37
PCDHGA11-201ENST00000398587 EDDM3BP56851 147 aa12.76□□□□□ -0.37
PCDHGA11-201ENST00000398587 SCAND1P57086 179 aa12.76□□□□□ -0.37
PCDHGA11-201ENST00000398587 RAC1P63000 192 aa12.76□□□□□ -0.37
PCDHGA11-201ENST00000398587 SSPNQ14714 243 aa12.76□□□□□ -0.37
PCDHGA11-201ENST00000398587 OR1C1Q15619 314 aa12.76□□□□□ -0.37
PCDHGA11-201ENST00000398587 CLPPQ16740 277 aaPredicted RBP12.76□□□□□ -0.37
PCDHGA11-201ENST00000398587 TMEM52Q8NDY8 209 aa12.76□□□□□ -0.37
PCDHGA11-201ENST00000398587 RBMXL1Q96E39 390 aaKnown RBP12.76□□□□□ -0.37
PCDHGA11-201ENST00000398587 ZNF768Q9H5H4 540 aaKnown RBP12.76□□□□□ -0.37
PCDHGA11-201ENST00000398587 TCRBV16S1A1N1A0A5B0 115 aa12.76□□□□□ -0.37
PCDHGA11-201ENST00000398587 PRRG2O14669 202 aa12.76□□□□□ -0.37
PCDHGA11-201ENST00000398587 IGHA1P01876 353 aa12.76□□□□□ -0.37
PCDHGA11-201ENST00000398587 IFNA4P05014 189 aa12.76□□□□□ -0.37
PCDHGA11-201ENST00000398587 OR4E1P0C645 316 aa12.76□□□□□ -0.37
PCDHGA11-201ENST00000398587 MSL3P1P0C860 447 aa12.76□□□□□ -0.37
PCDHGA11-201ENST00000398587 CT45A8P0DMV1 189 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms