RNA–Protein interactions for RNA: ENST00000398137.5

U2AF1-203, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best) BASIC

Gene U2AF1, Length 1,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-203ENST00000398137 RASSF4Q9H2L5 321 aa21.77■■□□□ 1.08
U2AF1-203ENST00000398137 PLK3Q9H4B4 646 aa21.77■■□□□ 1.08
U2AF1-203ENST00000398137 BRD7Q9NPI1 651 aa21.77■■□□□ 1.08
U2AF1-203ENST00000398137 MRPS18AQ9NVS2 196 aaKnown RBP21.77■■□□□ 1.08
U2AF1-203ENST00000398137 MRM2Q9UI43 246 aaKnown RBP21.77■■□□□ 1.08
U2AF1-203ENST00000398137 PCDHGB1Q9Y5G3 927 aa21.77■■□□□ 1.08
U2AF1-203ENST00000398137 YLPM1P49750 1951 aaKnown RBP21.77■■□□□ 1.08
U2AF1-203ENST00000398137 IGHV4-30-2A0A087WSY4 118 aa21.76■■□□□ 1.07
U2AF1-203ENST00000398137 DAPL1A0PJW8 107 aa21.76■■□□□ 1.07
U2AF1-203ENST00000398137 XPNPEP2O43895 674 aa21.76■■□□□ 1.07
U2AF1-203ENST00000398137 RIDAP52758 137 aaKnown RBP21.76■■□□□ 1.07
U2AF1-203ENST00000398137 ZNF121P58317 390 aaPredicted RBP21.76■■□□□ 1.07
U2AF1-203ENST00000398137 PSMA6P60900 246 aaKnown RBP21.76■■□□□ 1.07
U2AF1-203ENST00000398137 EGR3Q06889 387 aa21.76■■□□□ 1.07
U2AF1-203ENST00000398137 SNAI3Q3KNW1 292 aa21.76■■□□□ 1.07
U2AF1-203ENST00000398137 DEGS2Q6QHC5 323 aa21.76■■□□□ 1.07
U2AF1-203ENST00000398137 ACBD7Q8N6N7 88 aa21.76■■□□□ 1.07
U2AF1-203ENST00000398137 KLF14Q8TD94 323 aaPredicted RBP21.76■■□□□ 1.07
U2AF1-203ENST00000398137 NIPAL2Q9H841 368 aa21.76■■□□□ 1.07
U2AF1-203ENST00000398137 BARX1Q9HBU1 254 aaPredicted RBP21.76■■□□□ 1.07
U2AF1-203ENST00000398137 MYEF2Q9P2K5 600 aaKnown RBP21.76■■□□□ 1.07
U2AF1-203ENST00000398137 DUSP13Q9UII6 198 aa21.76■■□□□ 1.07
U2AF1-203ENST00000398137 H7C417 338 aa21.75■■□□□ 1.07
U2AF1-203ENST00000398137 FAM20BO75063 409 aa21.75■■□□□ 1.07
U2AF1-203ENST00000398137 ZNF254O75437 659 aa21.75■■□□□ 1.07
U2AF1-203ENST00000398137 CLPTM1O96005 669 aa21.75■■□□□ 1.07
U2AF1-203ENST00000398137 APOC1P02654 83 aa21.75■■□□□ 1.07
U2AF1-203ENST00000398137 GCH1P30793 250 aa21.75■■□□□ 1.07
U2AF1-203ENST00000398137 KLF3P57682 345 aaPredicted RBP21.75■■□□□ 1.07
U2AF1-203ENST00000398137 EFNB3Q15768 340 aa21.75■■□□□ 1.07
U2AF1-203ENST00000398137 ZNF718Q3SXZ3 478 aa21.75■■□□□ 1.07
U2AF1-203ENST00000398137 KLHL22Q53GT1 634 aa21.75■■□□□ 1.07
U2AF1-203ENST00000398137 PLEKHG7Q6ZR37 379 aa21.75■■□□□ 1.07
U2AF1-203ENST00000398137 FAM57BQ71RH2 274 aa21.75■■□□□ 1.07
U2AF1-203ENST00000398137 C1orf174Q8IYL3 243 aa21.75■■□□□ 1.07
U2AF1-203ENST00000398137 BPIFB6Q8NFQ5 453 aa21.75■■□□□ 1.07
U2AF1-203ENST00000398137 SYNPRQ8TBG9 265 aa21.75■■□□□ 1.07
U2AF1-203ENST00000398137 COG8Q96MW5 612 aa21.75■■□□□ 1.07
U2AF1-203ENST00000398137 JMJD1CQ15652 2540 aa21.74■■□□□ 1.07
U2AF1-203ENST00000398137 SONP18583 2426 aaKnown RBP21.74■■□□□ 1.07
U2AF1-203ENST00000398137 A0A1W2PPW3 197 aa21.74■■□□□ 1.07
U2AF1-203ENST00000398137 TMEM129A0AVI4 362 aa21.74■■□□□ 1.07
U2AF1-203ENST00000398137 B9A039 149 aa21.74■■□□□ 1.07
U2AF1-203ENST00000398137 TBX1O43435 398 aa21.74■■□□□ 1.07
U2AF1-203ENST00000398137 IGHA1P01876 353 aa21.74■■□□□ 1.07
U2AF1-203ENST00000398137 KRT8P05787 483 aa21.74■■□□□ 1.07
U2AF1-203ENST00000398137 ZNF250P15622 560 aa21.74■■□□□ 1.07
U2AF1-203ENST00000398137 SNRPD2P62316 118 aaKnown RBP21.74■■□□□ 1.07
U2AF1-203ENST00000398137 HLXQ14774 488 aaPredicted RBP21.74■■□□□ 1.07
U2AF1-203ENST00000398137 SWI5Q1ZZU3 235 aa21.74■■□□□ 1.07
U2AF1-203ENST00000398137 TMEM255AQ5JRV8 349 aa21.74■■□□□ 1.07
U2AF1-203ENST00000398137 YIPF7Q8N8F6 280 aa21.74■■□□□ 1.07
U2AF1-203ENST00000398137 OR5L1Q8NGL2 311 aa21.74■■□□□ 1.07
U2AF1-203ENST00000398137 SNX33Q8WV41 574 aa21.74■■□□□ 1.07
U2AF1-203ENST00000398137 FGF20Q9NP95 211 aaPredicted RBP21.74■■□□□ 1.07
U2AF1-203ENST00000398137 H3BSA7 217 aa21.73■■□□□ 1.07
U2AF1-203ENST00000398137 ADRA2AP08913 450 aa21.73■■□□□ 1.07
U2AF1-203ENST00000398137 MFGE8Q08431 387 aaPredicted RBP21.73■■□□□ 1.07
U2AF1-203ENST00000398137 ZNF829Q3KNS6 432 aaPredicted RBP21.73■■□□□ 1.07
U2AF1-203ENST00000398137 TP53I3Q53FA7 332 aa21.73■■□□□ 1.07
U2AF1-203ENST00000398137 C6orf141Q5SZD1 244 aa21.73■■□□□ 1.07
U2AF1-203ENST00000398137 GLYATL3Q5SZD4 288 aa21.73■■□□□ 1.07
U2AF1-203ENST00000398137 ZNF684Q5T5D7 378 aa21.73■■□□□ 1.07
U2AF1-203ENST00000398137 MBNL2Q5VZF2 373 aaKnown RBP21.73■■□□□ 1.07
U2AF1-203ENST00000398137 PRSS45Q7RTY3 260 aa21.73■■□□□ 1.07
U2AF1-203ENST00000398137 GGHQ92820 318 aa21.73■■□□□ 1.07
U2AF1-203ENST00000398137 GNG8Q9UK08 70 aa21.73■■□□□ 1.07
U2AF1-203ENST00000398137 CUBNO60494 3623 aa21.72■■□□□ 1.07
U2AF1-203ENST00000398137 CHD3Q12873 2000 aaKnown RBP21.72■■□□□ 1.07
U2AF1-203ENST00000398137 IRGMA1A4Y4 181 aa21.72■■□□□ 1.07
U2AF1-203ENST00000398137 METTL15A6NJ78 407 aa21.72■■□□□ 1.07
U2AF1-203ENST00000398137 KIAA1324LA8MWY0 1029 aaPredicted RBP21.72■■□□□ 1.07
U2AF1-203ENST00000398137 TUBG1P23258 451 aa21.72■■□□□ 1.07
U2AF1-203ENST00000398137 PRSS12P56730 875 aa21.72■■□□□ 1.07
U2AF1-203ENST00000398137 SELENOVP59797 346 aa21.72■■□□□ 1.07
U2AF1-203ENST00000398137 MALLQ13021 153 aa21.72■■□□□ 1.07
U2AF1-203ENST00000398137 ALKBH6Q3KRA9 238 aa21.72■■□□□ 1.07
U2AF1-203ENST00000398137 AHSA2Q719I0 299 aa21.72■■□□□ 1.07
U2AF1-203ENST00000398137 FAM220AQ7Z4H9 259 aa21.72■■□□□ 1.07
U2AF1-203ENST00000398137 LHFPL3Q86UP9 236 aa21.72■■□□□ 1.07
U2AF1-203ENST00000398137 ZNF525Q8N782 197 aa21.72■■□□□ 1.07
U2AF1-203ENST00000398137 OR2AE1Q8NHA4 323 aa21.72■■□□□ 1.07
U2AF1-203ENST00000398137 CMBLQ96DG6 245 aa21.72■■□□□ 1.07
U2AF1-203ENST00000398137 PGAM5Q96HS1 289 aa21.72■■□□□ 1.07
U2AF1-203ENST00000398137 ALG8Q9BVK2 526 aa21.72■■□□□ 1.07
U2AF1-203ENST00000398137 Q9H521 79 aa21.72■■□□□ 1.07
U2AF1-203ENST00000398137 TUBG2Q9NRH3 451 aa21.72■■□□□ 1.07
U2AF1-203ENST00000398137 INPP5EQ9NRR6 644 aa21.72■■□□□ 1.07
U2AF1-203ENST00000398137 PLCXD1Q9NUJ7 323 aa21.72■■□□□ 1.07
U2AF1-203ENST00000398137 ACOXLQ9NUZ1 547 aa21.72■■□□□ 1.07
U2AF1-203ENST00000398137 FAM206AQ9NX38 181 aa21.72■■□□□ 1.07
U2AF1-203ENST00000398137 ERVK13-1Q9NX77 482 aa21.72■■□□□ 1.07
U2AF1-203ENST00000398137 PSORS1C1Q9UIG5 152 aa21.72■■□□□ 1.07
U2AF1-203ENST00000398137 PCDHGB5Q9Y5G0 923 aa21.72■■□□□ 1.07
U2AF1-203ENST00000398137 IGLV3-9A0A075B6K5 115 aa21.71■■□□□ 1.07
U2AF1-203ENST00000398137 TMEM269A0A1B0GVZ9 245 aa21.71■■□□□ 1.07
U2AF1-203ENST00000398137 EFCAB10A6NFE3 127 aa21.71■■□□□ 1.07
U2AF1-203ENST00000398137 SLC1A7O00341 560 aa21.71■■□□□ 1.07
U2AF1-203ENST00000398137 LY6HO94772 140 aa21.71■■□□□ 1.07
U2AF1-203ENST00000398137 RPP14O95059 124 aaKnown RBP21.71■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms