RNA–Protein interactions for RNA: ENST00000397411.6

TSPAN4-207, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN4, Length 1,025 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-207ENST00000397411 PSMD9O00233 223 aa21.58■■□□□ 1.05
TSPAN4-207ENST00000397411 XRCC2O43543 280 aa21.58■■□□□ 1.05
TSPAN4-207ENST00000397411 ACHEP22303 614 aa21.58■■□□□ 1.05
TSPAN4-207ENST00000397411 USF1P22415 310 aaPredicted RBP21.58■■□□□ 1.05
TSPAN4-207ENST00000397411 PRSS12P56730 875 aa21.58■■□□□ 1.05
TSPAN4-207ENST00000397411 MRPS11P82912 194 aaKnown RBP21.58■■□□□ 1.05
TSPAN4-207ENST00000397411 ZNF92Q03936 586 aa21.58■■□□□ 1.05
TSPAN4-207ENST00000397411 TMED1Q13445 227 aa21.58■■□□□ 1.05
TSPAN4-207ENST00000397411 MEDAGQ5VYS4 303 aa21.58■■□□□ 1.05
TSPAN4-207ENST00000397411 CLEC9AQ6UXN8 241 aa21.58■■□□□ 1.05
TSPAN4-207ENST00000397411 OR52H1Q8NGJ2 320 aa21.58■■□□□ 1.05
TSPAN4-207ENST00000397411 SMR3AQ99954 134 aa21.58■■□□□ 1.05
TSPAN4-207ENST00000397411 TTTY10Q9BZA0 68 aa21.58■■□□□ 1.05
TSPAN4-207ENST00000397411 GSX1Q9H4S2 264 aaPredicted RBP21.58■■□□□ 1.05
TSPAN4-207ENST00000397411 ADGRL4Q9HBW9 690 aa21.58■■□□□ 1.05
TSPAN4-207ENST00000397411 FAM118AQ9NWS6 357 aa21.58■■□□□ 1.05
TSPAN4-207ENST00000397411 SMPD3Q9NY59 655 aaPredicted RBP21.58■■□□□ 1.05
TSPAN4-207ENST00000397411 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP21.58■■□□□ 1.052e-6■■■■□ 25.9
TSPAN4-207ENST00000397411 IQCF6A8MYZ5 107 aa21.57■■□□□ 1.04
TSPAN4-207ENST00000397411 ADH4P08319 380 aa21.57■■□□□ 1.04
TSPAN4-207ENST00000397411 SBK2P0C263 348 aa21.57■■□□□ 1.04
TSPAN4-207ENST00000397411 CRYBB2P43320 205 aa21.57■■□□□ 1.04
TSPAN4-207ENST00000397411 SNRPGP62308 76 aaKnown RBP21.57■■□□□ 1.04
TSPAN4-207ENST00000397411 ELF3P78545 371 aaPredicted RBP21.57■■□□□ 1.04
TSPAN4-207ENST00000397411 HFEQ30201 348 aa21.57■■□□□ 1.04
TSPAN4-207ENST00000397411 DEGS2Q6QHC5 323 aa21.57■■□□□ 1.04
TSPAN4-207ENST00000397411 YIPF5Q969M3 257 aa21.57■■□□□ 1.04
TSPAN4-207ENST00000397411 RDH12Q96NR8 316 aa21.57■■□□□ 1.04
TSPAN4-207ENST00000397411 DCLRE1BQ9H816 532 aa21.57■■□□□ 1.04
TSPAN4-207ENST00000397411 CLN6Q9NWW5 311 aa21.57■■□□□ 1.04
TSPAN4-207ENST00000397411 COPS3Q9UNS2 423 aa21.57■■□□□ 1.04
TSPAN4-207ENST00000397411 LRP12Q9Y561 859 aa21.57■■□□□ 1.04
TSPAN4-207ENST00000397411 PPIHO43447 177 aaKnown RBP21.56■■□□□ 1.04
TSPAN4-207ENST00000397411 MPZL2O60487 215 aa21.56■■□□□ 1.04
TSPAN4-207ENST00000397411 ENTPD6O75354 484 aa21.56■■□□□ 1.04
TSPAN4-207ENST00000397411 GIFP27352 417 aa21.56■■□□□ 1.04
TSPAN4-207ENST00000397411 GPR6P46095 362 aaPredicted RBP21.56■■□□□ 1.04
TSPAN4-207ENST00000397411 RIDAP52758 137 aaKnown RBP21.56■■□□□ 1.04
TSPAN4-207ENST00000397411 TMEM33P57088 247 aa21.56■■□□□ 1.04
TSPAN4-207ENST00000397411 CXCR4P61073 352 aa21.56■■□□□ 1.04
TSPAN4-207ENST00000397411 GFOD2Q3B7J2 385 aa21.56■■□□□ 1.04
TSPAN4-207ENST00000397411 ZNF322Q6U7Q0 402 aaPredicted RBP21.56■■□□□ 1.04
TSPAN4-207ENST00000397411 Q6ZR03 302 aa21.56■■□□□ 1.04
TSPAN4-207ENST00000397411 PACRGLQ8N7B6 248 aa21.56■■□□□ 1.04
TSPAN4-207ENST00000397411 TBX5Q99593 518 aa21.56■■□□□ 1.04
TSPAN4-207ENST00000397411 REPIN1Q9BWE0 567 aaKnown RBP21.56■■□□□ 1.04
TSPAN4-207ENST00000397411 BPESC1Q9GZL8 116 aa21.56■■□□□ 1.04
TSPAN4-207ENST00000397411 OPA3Q9H6K4 179 aa21.56■■□□□ 1.04
TSPAN4-207ENST00000397411 CELSR1Q9NYQ6 3014 aa21.55■■□□□ 1.04
TSPAN4-207ENST00000397411 C5orf63A6NC05 138 aa21.55■■□□□ 1.04
TSPAN4-207ENST00000397411 CD300LBA8K4G0 201 aa21.55■■□□□ 1.04
TSPAN4-207ENST00000397411 VWC2LB2RUY7 222 aa21.55■■□□□ 1.04
TSPAN4-207ENST00000397411 ZNF254O75437 659 aa21.55■■□□□ 1.04
TSPAN4-207ENST00000397411 LY6G6DO95868 133 aa21.55■■□□□ 1.04
TSPAN4-207ENST00000397411 CD55P08174 381 aa21.55■■□□□ 1.04
TSPAN4-207ENST00000397411 TNFRSF1AP19438 455 aa21.55■■□□□ 1.04
TSPAN4-207ENST00000397411 CFL1P23528 166 aaKnown RBP21.55■■□□□ 1.04
TSPAN4-207ENST00000397411 LOXL1Q08397 574 aaPredicted RBP21.55■■□□□ 1.04
TSPAN4-207ENST00000397411 OCLNQ16625 522 aa21.55■■□□□ 1.04
TSPAN4-207ENST00000397411 ZNF679Q8IYX0 411 aa21.55■■□□□ 1.04
TSPAN4-207ENST00000397411 OR10H4Q8NGA5 316 aa21.55■■□□□ 1.04
TSPAN4-207ENST00000397411 CCL17Q92583 94 aa21.55■■□□□ 1.04
TSPAN4-207ENST00000397411 SGK3Q96BR1 496 aa21.55■■□□□ 1.04
TSPAN4-207ENST00000397411 REEP6Q96HR9 211 aa21.55■■□□□ 1.04
TSPAN4-207ENST00000397411 Q96MT0 163 aa21.55■■□□□ 1.04
TSPAN4-207ENST00000397411 OR8B4Q96RC9 309 aa21.55■■□□□ 1.04
TSPAN4-207ENST00000397411 APOL4Q9BPW4 351 aa21.55■■□□□ 1.04
TSPAN4-207ENST00000397411 ZNF275Q9NSD4 429 aaPredicted RBP21.55■■□□□ 1.04
TSPAN4-207ENST00000397411 TREM2Q9NZC2 230 aa21.55■■□□□ 1.04
TSPAN4-207ENST00000397411 H0YHG0 523 aa21.54■■□□□ 1.04
TSPAN4-207ENST00000397411 APOL3O95236 402 aa21.54■■□□□ 1.04
TSPAN4-207ENST00000397411 OR2T7P0C7T2 308 aa21.54■■□□□ 1.04
TSPAN4-207ENST00000397411 PEX2P28328 305 aa21.54■■□□□ 1.04
TSPAN4-207ENST00000397411 SLC25A30Q5SVS4 291 aa21.54■■□□□ 1.04
TSPAN4-207ENST00000397411 OR2T27Q8NH04 317 aa21.54■■□□□ 1.04
TSPAN4-207ENST00000397411 CYGBQ8WWM9 190 aa21.54■■□□□ 1.04
TSPAN4-207ENST00000397411 SLC30A2Q9BRI3 323 aa21.54■■□□□ 1.04
TSPAN4-207ENST00000397411 CR1P17927 2039 aa21.54■■□□□ 1.04
TSPAN4-207ENST00000397411 TMEM269A0A1B0GVZ9 245 aa21.53■■□□□ 1.04
TSPAN4-207ENST00000397411 E9PQ18 207 aa21.53■■□□□ 1.04
TSPAN4-207ENST00000397411 SLC16A6O15403 523 aa21.53■■□□□ 1.04
TSPAN4-207ENST00000397411 MTNR1AP48039 350 aa21.53■■□□□ 1.04
TSPAN4-207ENST00000397411 SRP9P49458 86 aaKnown RBP21.53■■□□□ 1.04
TSPAN4-207ENST00000397411 PSMA6P60900 246 aaKnown RBP21.53■■□□□ 1.04
TSPAN4-207ENST00000397411 ROM1Q03395 351 aa21.53■■□□□ 1.04
TSPAN4-207ENST00000397411 RIN1Q13671 783 aa21.53■■□□□ 1.04
TSPAN4-207ENST00000397411 ZNF829Q3KNS6 432 aaPredicted RBP21.53■■□□□ 1.04
TSPAN4-207ENST00000397411 Q71RC1 249 aaPredicted RBP21.53■■□□□ 1.04
TSPAN4-207ENST00000397411 OR10AD1Q8NGE0 317 aa21.53■■□□□ 1.04
TSPAN4-207ENST00000397411 RNFT2Q96EX2 444 aa21.53■■□□□ 1.04
TSPAN4-207ENST00000397411 SLC22A4Q9H015 551 aa21.53■■□□□ 1.04
TSPAN4-207ENST00000397411 VCXQ9H320 206 aa21.53■■□□□ 1.04
TSPAN4-207ENST00000397411 AASSQ9UDR5 926 aa21.53■■□□□ 1.04
TSPAN4-207ENST00000397411 IL19Q9UHD0 177 aa21.53■■□□□ 1.04
TSPAN4-207ENST00000397411 GTF2A1LQ9UNN4 478 aa21.53■■□□□ 1.04
TSPAN4-207ENST00000397411 NOP16Q9Y3C1 178 aaKnown RBP21.53■■□□□ 1.04
TSPAN4-207ENST00000397411 LILRA1O75019 489 aa21.52■■□□□ 1.04
TSPAN4-207ENST00000397411 KRT8P05787 483 aa21.52■■□□□ 1.04
TSPAN4-207ENST00000397411 DDOSTP39656 456 aa21.52■■□□□ 1.04
TSPAN4-207ENST00000397411 CHN2P52757 468 aa21.52■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms