RNA–Protein interactions for RNA: ENST00000396386.6

CBX3-202, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-202ENST00000396386 CLEC1AQ8NC01 280 aa13.16□□□□□ -0.3
CBX3-202ENST00000396386 GPX8Q8TED1 209 aa13.16□□□□□ -0.3
CBX3-202ENST00000396386 ZNF775Q96BV0 537 aaPredicted RBP13.16□□□□□ -0.3
CBX3-202ENST00000396386 GAL3ST1Q99999 423 aa13.16□□□□□ -0.3
CBX3-202ENST00000396386 OR10A4Q9H209 315 aa13.16□□□□□ -0.3
CBX3-202ENST00000396386 A0A1B0GUH1 482 aa13.15□□□□□ -0.3
CBX3-202ENST00000396386 FAM172BPA6NC97 362 aa13.15□□□□□ -0.3
CBX3-202ENST00000396386 METTL21EPA6NDL7 271 aa13.15□□□□□ -0.3
CBX3-202ENST00000396386 ARPC1BO15143 372 aaKnown RBP13.15□□□□□ -0.3
CBX3-202ENST00000396386 NDUFB6O95139 128 aa13.15□□□□□ -0.3
CBX3-202ENST00000396386 AKAIN1P0CW23 69 aa13.15□□□□□ -0.3
CBX3-202ENST00000396386 GTF2F2P13984 249 aa13.15□□□□□ -0.3
CBX3-202ENST00000396386 ABOP16442 354 aa13.15□□□□□ -0.3
CBX3-202ENST00000396386 ANOS1P23352 680 aa13.15□□□□□ -0.3
CBX3-202ENST00000396386 VEGFCP49767 419 aa13.15□□□□□ -0.3
CBX3-202ENST00000396386 CLDN15P56746 228 aa13.15□□□□□ -0.3
CBX3-202ENST00000396386 CDK10Q15131 360 aa13.15□□□□□ -0.3
CBX3-202ENST00000396386 RAB35Q15286 201 aa13.15□□□□□ -0.3
CBX3-202ENST00000396386 CSRP2Q16527 193 aa13.15□□□□□ -0.3
CBX3-202ENST00000396386 ST3GAL2Q16842 350 aa13.15□□□□□ -0.3
CBX3-202ENST00000396386 OR10K2Q6IF99 312 aa13.15□□□□□ -0.3
CBX3-202ENST00000396386 RAB12Q6IQ22 244 aa13.15□□□□□ -0.3
CBX3-202ENST00000396386 LINC00696Q6ZRV3 163 aa13.15□□□□□ -0.3
CBX3-202ENST00000396386 OR4C16Q8NGL9 310 aa13.15□□□□□ -0.3
CBX3-202ENST00000396386 CPT1CQ8TCG5 803 aa13.15□□□□□ -0.3
CBX3-202ENST00000396386 NKD1Q969G9 470 aa13.15□□□□□ -0.3
CBX3-202ENST00000396386 SPTSSAQ969W0 71 aa13.15□□□□□ -0.3
CBX3-202ENST00000396386 SOX7Q9BT81 388 aa13.15□□□□□ -0.3
CBX3-202ENST00000396386 HES7Q9BYE0 225 aa13.15□□□□□ -0.3
CBX3-202ENST00000396386 TMEM38BQ9NVV0 291 aa13.15□□□□□ -0.3
CBX3-202ENST00000396386 PAQR5Q9NXK6 330 aaPredicted RBP13.15□□□□□ -0.3
CBX3-202ENST00000396386 PLEK2Q9NYT0 353 aa13.15□□□□□ -0.3
CBX3-202ENST00000396386 FLVCR2Q9UPI3 526 aa13.15□□□□□ -0.3
CBX3-202ENST00000396386 A0A0U1RQV5 110 aa13.14□□□□□ -0.31
CBX3-202ENST00000396386 MEIS3P1A6NDR6 274 aa13.14□□□□□ -0.31
CBX3-202ENST00000396386 RGS13O14921 159 aa13.14□□□□□ -0.31
CBX3-202ENST00000396386 IGLV3-1P01715 115 aa13.14□□□□□ -0.31
CBX3-202ENST00000396386 CST2P09228 141 aa13.14□□□□□ -0.31
CBX3-202ENST00000396386 ANXA3P12429 323 aa13.14□□□□□ -0.31
CBX3-202ENST00000396386 OTX1P32242 354 aaPredicted RBP13.14□□□□□ -0.31
CBX3-202ENST00000396386 ZNF93P35789 620 aaPredicted RBP13.14□□□□□ -0.31
CBX3-202ENST00000396386 GZMKP49863 264 aa13.14□□□□□ -0.31
CBX3-202ENST00000396386 METTL11BQ5VVY1 283 aa13.14□□□□□ -0.31
CBX3-202ENST00000396386 AWAT2Q6E213 333 aa13.14□□□□□ -0.31
CBX3-202ENST00000396386 SULF2Q8IWU5 870 aa13.14□□□□□ -0.31
CBX3-202ENST00000396386 CDH26Q8IXH8 852 aa13.14□□□□□ -0.31
CBX3-202ENST00000396386 OR5AS1Q8N127 324 aa13.14□□□□□ -0.31
CBX3-202ENST00000396386 PRSS33Q8NF86 280 aa13.14□□□□□ -0.31
CBX3-202ENST00000396386 OR11H7Q8NGC8 314 aa13.14□□□□□ -0.31
CBX3-202ENST00000396386 OR14K1Q8NGZ2 314 aa13.14□□□□□ -0.31
CBX3-202ENST00000396386 FAM46BQ96A09 425 aa13.14□□□□□ -0.31
CBX3-202ENST00000396386 FBXO17Q96EF6 278 aa13.14□□□□□ -0.31
CBX3-202ENST00000396386 ZNF837Q96EG3 531 aaPredicted RBP13.14□□□□□ -0.31
CBX3-202ENST00000396386 ALKBH3Q96Q83 286 aaPredicted RBP13.14□□□□□ -0.31
CBX3-202ENST00000396386 TTTY12Q9BZ98 90 aa13.14□□□□□ -0.31
CBX3-202ENST00000396386 NOX3Q9HBY0 568 aa13.14□□□□□ -0.31
CBX3-202ENST00000396386 CRLF2Q9HC73 371 aa13.14□□□□□ -0.31
CBX3-202ENST00000396386 MYEF2Q9P2K5 600 aaKnown RBP13.14□□□□□ -0.31
CBX3-202ENST00000396386 F5H5K5 113 aa13.14□□□□□ -0.31
CBX3-202ENST00000396386 M0R135 149 aa13.14□□□□□ -0.31
CBX3-202ENST00000396386 SSNA1O43805 119 aa13.14□□□□□ -0.31
CBX3-202ENST00000396386 SCGNO76038 276 aa13.14□□□□□ -0.31
CBX3-202ENST00000396386 TGM6O95932 706 aa13.14□□□□□ -0.31
CBX3-202ENST00000396386 RFC3P40938 356 aa13.14□□□□□ -0.31
CBX3-202ENST00000396386 FAPQ12884 760 aa13.14□□□□□ -0.31
CBX3-202ENST00000396386 RIPPLY2Q5TAB7 128 aa13.14□□□□□ -0.31
CBX3-202ENST00000396386 ZNF782Q6ZMW2 699 aaPredicted RBP13.14□□□□□ -0.31
CBX3-202ENST00000396386 ACBD4Q8NC06 268 aa13.14□□□□□ -0.31
CBX3-202ENST00000396386 ITFG2Q969R8 447 aa13.14□□□□□ -0.31
CBX3-202ENST00000396386 TMEM45BQ96B21 275 aa13.14□□□□□ -0.31
CBX3-202ENST00000396386 ZNF799Q96GE5 643 aa13.14□□□□□ -0.31
CBX3-202ENST00000396386 ZNF845Q96IR2 970 aaPredicted RBP13.14□□□□□ -0.31
CBX3-202ENST00000396386 SLCO5A1Q9H2Y9 848 aa13.14□□□□□ -0.31
CBX3-202ENST00000396386 BEX1Q9HBH7 125 aa13.14□□□□□ -0.31
CBX3-202ENST00000396386 PLA2G3Q9NZ20 509 aa13.14□□□□□ -0.31
CBX3-202ENST00000396386 FBLN5Q9UBX5 448 aa13.14□□□□□ -0.31
CBX3-202ENST00000396386 ZNF222Q9UK12 451 aa13.14□□□□□ -0.31
CBX3-202ENST00000396386 NCOA6Q14686 2063 aaPredicted RBP13.14□□□□□ -0.31
CBX3-202ENST00000396386 FAM166BA8MTA8 275 aa13.13□□□□□ -0.31
CBX3-202ENST00000396386 SGCEO43556 437 aa13.13□□□□□ -0.31
CBX3-202ENST00000396386 HCKP08631 526 aa13.13□□□□□ -0.31
CBX3-202ENST00000396386 CD82P27701 267 aa13.13□□□□□ -0.31
CBX3-202ENST00000396386 NTF4P34130 210 aa13.13□□□□□ -0.31
CBX3-202ENST00000396386 THBS4P35443 961 aa13.13□□□□□ -0.31
CBX3-202ENST00000396386 LHX2P50458 406 aa13.13□□□□□ -0.31
CBX3-202ENST00000396386 QRFPP83859 136 aa13.13□□□□□ -0.31
CBX3-202ENST00000396386 PLGLB1Q02325 96 aa13.13□□□□□ -0.31
CBX3-202ENST00000396386 SCRN3Q0VDG4 424 aa13.13□□□□□ -0.31
CBX3-202ENST00000396386 UNC119Q13432 240 aa13.13□□□□□ -0.31
CBX3-202ENST00000396386 RBMS2Q15434 407 aaKnown RBP13.13□□□□□ -0.31
CBX3-202ENST00000396386 MOGAT2Q3SYC2 334 aa13.13□□□□□ -0.31
CBX3-202ENST00000396386 CCDC54Q8NEL0 328 aa13.13□□□□□ -0.31
CBX3-202ENST00000396386 BEST4Q8NFU0 473 aa13.13□□□□□ -0.31
CBX3-202ENST00000396386 ZFAND1Q8TCF1 268 aa13.13□□□□□ -0.31
CBX3-202ENST00000396386 ABHD3Q8WU67 409 aa13.13□□□□□ -0.31
CBX3-202ENST00000396386 SEH1LQ96EE3 360 aa13.13□□□□□ -0.31
CBX3-202ENST00000396386 LYZL4Q96KX0 146 aa13.13□□□□□ -0.31
CBX3-202ENST00000396386 PARD6AQ9NPB6 346 aa13.13□□□□□ -0.31
CBX3-202ENST00000396386 ITGB1BP2Q9UKP3 347 aa13.13□□□□□ -0.31
CBX3-202ENST00000396386 MRPS28Q9Y2Q9 187 aaKnown RBP13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms