RNA–Protein interactions for RNA: ENST00000394573.5

SLC28A1-203, Transcript of solute carrier family 28 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC28A1, Length 2,769 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-203ENST00000394573 ALDH3B1P43353 468 aa11.23□□□□□ -0.61
SLC28A1-203ENST00000394573 TMEM33P57088 247 aa11.23□□□□□ -0.61
SLC28A1-203ENST00000394573 SLC35A1P78382 337 aa11.23□□□□□ -0.61
SLC28A1-203ENST00000394573 MMDQ15546 238 aa11.23□□□□□ -0.61
SLC28A1-203ENST00000394573 C10orf120Q5SQS8 335 aa11.23□□□□□ -0.61
SLC28A1-203ENST00000394573 SYT13Q7L8C5 426 aa11.23□□□□□ -0.61
SLC28A1-203ENST00000394573 GCNT2Q8N0V5 402 aa11.23□□□□□ -0.61
SLC28A1-203ENST00000394573 TMEM229BQ8NBD8 167 aa11.23□□□□□ -0.61
SLC28A1-203ENST00000394573 SLC24A4Q8NFF2 622 aa11.23□□□□□ -0.61
SLC28A1-203ENST00000394573 OR2L3Q8NG85 312 aa11.23□□□□□ -0.61
SLC28A1-203ENST00000394573 OR52E2Q8NGJ4 325 aa11.23□□□□□ -0.61
SLC28A1-203ENST00000394573 WFDC12Q8WWY7 111 aa11.23□□□□□ -0.61
SLC28A1-203ENST00000394573 NMES1Q9C002 83 aa11.23□□□□□ -0.61
SLC28A1-203ENST00000394573 DMRT3Q9NQL9 472 aa11.23□□□□□ -0.61
SLC28A1-203ENST00000394573 TM7SF3Q9NS93 570 aa11.23□□□□□ -0.61
SLC28A1-203ENST00000394573 YBX2Q9Y2T7 364 aaKnown RBP11.23□□□□□ -0.61
SLC28A1-203ENST00000394573 NPIPA7E9PJI5 369 aa11.22□□□□□ -0.61
SLC28A1-203ENST00000394573 SCDO00767 359 aa11.22□□□□□ -0.61
SLC28A1-203ENST00000394573 EIF1AYO14602 144 aaKnown RBP11.22□□□□□ -0.61
SLC28A1-203ENST00000394573 HSD17B6O14756 317 aa11.22□□□□□ -0.61
SLC28A1-203ENST00000394573 CNMDO75829 334 aa11.22□□□□□ -0.61
SLC28A1-203ENST00000394573 MELTFP08582 738 aa11.22□□□□□ -0.61
SLC28A1-203ENST00000394573 NPIPA8P0DM63 369 aa11.22□□□□□ -0.61
SLC28A1-203ENST00000394573 EIF1AXP47813 144 aaKnown RBP11.22□□□□□ -0.61
SLC28A1-203ENST00000394573 GLIPR1P48060 266 aa11.22□□□□□ -0.61
SLC28A1-203ENST00000394573 ID2Q02363 134 aa11.22□□□□□ -0.61
SLC28A1-203ENST00000394573 OR8G2PQ6IF36 304 aa11.22□□□□□ -0.61
SLC28A1-203ENST00000394573 P4HA3Q7Z4N8 544 aa11.22□□□□□ -0.61
SLC28A1-203ENST00000394573 GBGT1Q8N5D6 347 aa11.22□□□□□ -0.61
SLC28A1-203ENST00000394573 PLPP7Q8NBV4 271 aa11.22□□□□□ -0.61
SLC28A1-203ENST00000394573 NECAP1Q8NC96 275 aa11.22□□□□□ -0.61
SLC28A1-203ENST00000394573 OR9A4Q8NGU2 314 aa11.22□□□□□ -0.61
SLC28A1-203ENST00000394573 ZNF2Q9BSG1 426 aaPredicted RBP11.22□□□□□ -0.61
SLC28A1-203ENST00000394573 ZDHHC6Q9H6R6 413 aa11.22□□□□□ -0.61
SLC28A1-203ENST00000394573 ZFP37Q9Y6Q3 630 aaPredicted RBP11.22□□□□□ -0.61
SLC28A1-203ENST00000394573 A0A1B0GUS0 222 aa11.22□□□□□ -0.61
SLC28A1-203ENST00000394573 OR2AG2A6NM03 316 aa11.22□□□□□ -0.61
SLC28A1-203ENST00000394573 M0QZQ0 153 aa11.22□□□□□ -0.61
SLC28A1-203ENST00000394573 SRPX2O60687 465 aaPredicted RBP11.22□□□□□ -0.61
SLC28A1-203ENST00000394573 CKMP06732 381 aa11.22□□□□□ -0.61
SLC28A1-203ENST00000394573 OR5AC1P0C628 307 aa11.22□□□□□ -0.61
SLC28A1-203ENST00000394573 KCNE1P15382 129 aa11.22□□□□□ -0.61
SLC28A1-203ENST00000394573 SLC2A5P22732 501 aa11.22□□□□□ -0.61
SLC28A1-203ENST00000394573 MRPL49Q13405 166 aaKnown RBP11.22□□□□□ -0.61
SLC28A1-203ENST00000394573 TMPRSS7Q7RTY8 843 aa11.22□□□□□ -0.61
SLC28A1-203ENST00000394573 ZNF584Q8IVC4 421 aa11.22□□□□□ -0.61
SLC28A1-203ENST00000394573 OR2L2Q8NH16 312 aa11.22□□□□□ -0.61
SLC28A1-203ENST00000394573 TMEM37Q8WXS4 190 aa11.22□□□□□ -0.61
SLC28A1-203ENST00000394573 OR5P2Q8WZ92 322 aa11.22□□□□□ -0.61
SLC28A1-203ENST00000394573 TMEM106AQ96A25 262 aa11.22□□□□□ -0.61
SLC28A1-203ENST00000394573 RNF2Q99496 336 aa11.22□□□□□ -0.61
SLC28A1-203ENST00000394573 FBRSQ9HAH7 460 aa11.22□□□□□ -0.61
SLC28A1-203ENST00000394573 FLRT3Q9NZU0 649 aa11.22□□□□□ -0.61
SLC28A1-203ENST00000394573 LUZP4Q9P127 313 aa11.22□□□□□ -0.61
SLC28A1-203ENST00000394573 LIPGQ9Y5X9 500 aa11.22□□□□□ -0.61
SLC28A1-203ENST00000394573 GOSR1O95249 250 aa11.22□□□□□ -0.61
SLC28A1-203ENST00000394573 MMP3P08254 477 aa11.22□□□□□ -0.61
SLC28A1-203ENST00000394573 RPL12P30050 165 aaKnown RBP11.22□□□□□ -0.61
SLC28A1-203ENST00000394573 ASCL1P50553 236 aa11.22□□□□□ -0.61
SLC28A1-203ENST00000394573 KLF3P57682 345 aaPredicted RBP11.22□□□□□ -0.61
SLC28A1-203ENST00000394573 SPEM2Q0P670 501 aa11.22□□□□□ -0.61
SLC28A1-203ENST00000394573 DECR1Q16698 335 aa11.22□□□□□ -0.61
SLC28A1-203ENST00000394573 FBXO42Q6P3S6 717 aa11.22□□□□□ -0.61
SLC28A1-203ENST00000394573 TMEM182Q6ZP80 229 aaPredicted RBP11.22□□□□□ -0.61
SLC28A1-203ENST00000394573 LHFPL4Q7Z7J7 247 aa11.22□□□□□ -0.61
SLC28A1-203ENST00000394573 OR2L13Q8N349 312 aa11.22□□□□□ -0.61
SLC28A1-203ENST00000394573 FAM160A2Q8N612 972 aaPredicted RBP11.22□□□□□ -0.61
SLC28A1-203ENST00000394573 STPG4Q8N801 248 aa11.22□□□□□ -0.61
SLC28A1-203ENST00000394573 FAM174AQ8TBP5 190 aa11.22□□□□□ -0.61
SLC28A1-203ENST00000394573 MRGPRDQ8TDS7 321 aa11.22□□□□□ -0.61
SLC28A1-203ENST00000394573 ANKRD9Q96BM1 317 aaPredicted RBP11.22□□□□□ -0.61
SLC28A1-203ENST00000394573 FAM3DQ96BQ1 224 aa11.22□□□□□ -0.61
SLC28A1-203ENST00000394573 CMBLQ96DG6 245 aa11.22□□□□□ -0.61
SLC28A1-203ENST00000394573 ABHD14AQ9BUJ0 271 aa11.22□□□□□ -0.61
SLC28A1-203ENST00000394573 LGR4Q9BXB1 951 aa11.22□□□□□ -0.61
SLC28A1-203ENST00000394573 CSTL1Q9H114 145 aa11.22□□□□□ -0.61
SLC28A1-203ENST00000394573 RBM7Q9Y580 266 aaKnown RBP11.22□□□□□ -0.61
SLC28A1-203ENST00000394573 K7ERQ8 282 aa11.21□□□□□ -0.61
SLC28A1-203ENST00000394573 UMODP07911 640 aa11.21□□□□□ -0.61
SLC28A1-203ENST00000394573 CD55P08174 381 aa11.21□□□□□ -0.61
SLC28A1-203ENST00000394573 TACR2P21452 398 aa11.21□□□□□ -0.61
SLC28A1-203ENST00000394573 CX3CR1P49238 355 aa11.21□□□□□ -0.61
SLC28A1-203ENST00000394573 GNB2P62879 340 aa11.21□□□□□ -0.61
SLC28A1-203ENST00000394573 OTPQ5XKR4 325 aa11.21□□□□□ -0.61
SLC28A1-203ENST00000394573 ZNF66Q6ZN08 573 aa11.21□□□□□ -0.61
SLC28A1-203ENST00000394573 SLC35D2Q76EJ3 337 aa11.21□□□□□ -0.61
SLC28A1-203ENST00000394573 ARV1Q9H2C2 271 aa11.21□□□□□ -0.61
SLC28A1-203ENST00000394573 NAGKQ9UJ70 344 aa11.21□□□□□ -0.61
SLC28A1-203ENST00000394573 P2RX6O15547 441 aa11.21□□□□□ -0.62
SLC28A1-203ENST00000394573 SCGB1D2O95969 90 aa11.21□□□□□ -0.62
SLC28A1-203ENST00000394573 HOXC8P31273 242 aa11.21□□□□□ -0.62
SLC28A1-203ENST00000394573 HRH1P35367 487 aa11.21□□□□□ -0.62
SLC28A1-203ENST00000394573 RPS27P42677 84 aaKnown RBP11.21□□□□□ -0.62
SLC28A1-203ENST00000394573 Q499Y3 187 aa11.21□□□□□ -0.62
SLC28A1-203ENST00000394573 SLCO4C1Q6ZQN7 724 aa11.21□□□□□ -0.62
SLC28A1-203ENST00000394573 SLC35E1Q96K37 410 aa11.21□□□□□ -0.62
SLC28A1-203ENST00000394573 MARCH2Q9P0N8 246 aa11.21□□□□□ -0.62
SLC28A1-203ENST00000394573 GTF2A1LQ9UNN4 478 aa11.21□□□□□ -0.62
SLC28A1-203ENST00000394573 WDR90Q96KV7 1748 aa11.2□□□□□ -0.62
SLC28A1-203ENST00000394573 ELOA3DA6NLF2 546 aaPredicted RBP11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms