RNA–Protein interactions for RNA: ENST00000393773.7

CHMP3-202, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-202ENST00000393773 C5orf63A6NC05 138 aa12.66□□□□□ -0.38
CHMP3-202ENST00000393773 OR10H3O60404 316 aa12.66□□□□□ -0.38
CHMP3-202ENST00000393773 CRABP1P29762 137 aa12.66□□□□□ -0.38
CHMP3-202ENST00000393773 OMPP47874 163 aa12.66□□□□□ -0.38
CHMP3-202ENST00000393773 OR8B8Q15620 311 aa12.66□□□□□ -0.38
CHMP3-202ENST00000393773 FBLN7Q53RD9 439 aa12.66□□□□□ -0.38
CHMP3-202ENST00000393773 KPRPQ5T749 579 aaPredicted RBP12.66□□□□□ -0.38
CHMP3-202ENST00000393773 DHRS7BQ6IAN0 325 aaPredicted RBP12.66□□□□□ -0.38
CHMP3-202ENST00000393773 DPY19L2P2Q6ZN68 376 aa12.66□□□□□ -0.38
CHMP3-202ENST00000393773 CBLL1Q75N03 491 aa12.66□□□□□ -0.38
CHMP3-202ENST00000393773 BTN2A1Q7KYR7 527 aa12.66□□□□□ -0.38
CHMP3-202ENST00000393773 VMO1Q7Z5L0 202 aa12.66□□□□□ -0.38
CHMP3-202ENST00000393773 PDZD9Q8IXQ8 264 aa12.66□□□□□ -0.38
CHMP3-202ENST00000393773 FGFRL1Q8N441 504 aa12.66□□□□□ -0.38
CHMP3-202ENST00000393773 GCSAMQ8N6F7 178 aa12.66□□□□□ -0.38
CHMP3-202ENST00000393773 BOLLQ8N9W6 283 aaKnown RBP12.66□□□□□ -0.38
CHMP3-202ENST00000393773 LRTOMTQ8WZ04 291 aa12.66□□□□□ -0.38
CHMP3-202ENST00000393773 SLCO4A1Q96BD0 722 aa12.66□□□□□ -0.38
CHMP3-202ENST00000393773 RASSF4Q9H2L5 321 aa12.66□□□□□ -0.38
CHMP3-202ENST00000393773 TRIM36Q9NQ86 728 aa12.66□□□□□ -0.38
CHMP3-202ENST00000393773 VPREB3Q9UKI3 123 aa12.66□□□□□ -0.38
CHMP3-202ENST00000393773 COL7A1Q02388 2944 aa12.65□□□□□ -0.38
CHMP3-202ENST00000393773 RYR3Q15413 4870 aa12.65□□□□□ -0.38
CHMP3-202ENST00000393773 TRAV38-1A0A0B4J264 116 aa12.65□□□□□ -0.38
CHMP3-202ENST00000393773 A0A1W2PRQ8 180 aa12.65□□□□□ -0.38
CHMP3-202ENST00000393773 CD300LBA8K4G0 201 aa12.65□□□□□ -0.38
CHMP3-202ENST00000393773 F5H5K5 113 aa12.65□□□□□ -0.38
CHMP3-202ENST00000393773 G3V4G9 280 aa12.65□□□□□ -0.38
CHMP3-202ENST00000393773 DVL1O14640 695 aa12.65□□□□□ -0.38
CHMP3-202ENST00000393773 GMDSO60547 372 aa12.65□□□□□ -0.38
CHMP3-202ENST00000393773 TSPAN9O75954 239 aa12.65□□□□□ -0.38
CHMP3-202ENST00000393773 GYPAP02724 150 aa12.65□□□□□ -0.38
CHMP3-202ENST00000393773 MDH1P40925 334 aaKnown RBP12.65□□□□□ -0.38
CHMP3-202ENST00000393773 CENPAP49450 140 aa12.65□□□□□ -0.38
CHMP3-202ENST00000393773 RPS6KA3P51812 740 aa12.65□□□□□ -0.38
CHMP3-202ENST00000393773 ARF6P62330 175 aa12.65□□□□□ -0.38
CHMP3-202ENST00000393773 ECH1Q13011 328 aa12.65□□□□□ -0.38
CHMP3-202ENST00000393773 MALLQ13021 153 aa12.65□□□□□ -0.38
CHMP3-202ENST00000393773 DGCR6Q14129 220 aa12.65□□□□□ -0.38
CHMP3-202ENST00000393773 C11orf91Q3C1V1 193 aa12.65□□□□□ -0.38
CHMP3-202ENST00000393773 SNAI3Q3KNW1 292 aa12.65□□□□□ -0.38
CHMP3-202ENST00000393773 TEX36Q5VZQ5 186 aa12.65□□□□□ -0.38
CHMP3-202ENST00000393773 MRPL21Q7Z2W9 205 aaKnown RBP12.65□□□□□ -0.38
CHMP3-202ENST00000393773 OR6V1Q8N148 313 aa12.65□□□□□ -0.38
CHMP3-202ENST00000393773 PLPP7Q8NBV4 271 aa12.65□□□□□ -0.38
CHMP3-202ENST00000393773 SPRYD4Q8WW59 207 aaPredicted RBP12.65□□□□□ -0.38
CHMP3-202ENST00000393773 PITX2Q99697 317 aa12.65□□□□□ -0.38
CHMP3-202ENST00000393773 SLC22A4Q9H015 551 aa12.65□□□□□ -0.38
CHMP3-202ENST00000393773 DPAGT1Q9H3H5 408 aa12.65□□□□□ -0.38
CHMP3-202ENST00000393773 SAR1AQ9NR31 198 aa12.65□□□□□ -0.38
CHMP3-202ENST00000393773 GID8Q9NWU2 228 aa12.65□□□□□ -0.38
CHMP3-202ENST00000393773 CYB5R1Q9UHQ9 305 aa12.65□□□□□ -0.38
CHMP3-202ENST00000393773 RPUSD1Q9UJJ7 312 aaKnown RBP12.65□□□□□ -0.38
CHMP3-202ENST00000393773 B9D1Q9UPM9 204 aa12.65□□□□□ -0.38
CHMP3-202ENST00000393773 NOP16Q9Y3C1 178 aaKnown RBP12.65□□□□□ -0.38
CHMP3-202ENST00000393773 KPTNQ9Y664 436 aa12.65□□□□□ -0.38
CHMP3-202ENST00000393773 ENPP4Q9Y6X5 453 aa12.65□□□□□ -0.38
CHMP3-202ENST00000393773 A0A1B0GW55 424 aa12.64□□□□□ -0.39
CHMP3-202ENST00000393773 CXCR6O00574 342 aa12.64□□□□□ -0.39
CHMP3-202ENST00000393773 NDUFA2O43678 99 aa12.64□□□□□ -0.39
CHMP3-202ENST00000393773 LCATP04180 440 aa12.64□□□□□ -0.39
CHMP3-202ENST00000393773 DUX4L2P0CJ85 424 aa12.64□□□□□ -0.39
CHMP3-202ENST00000393773 DUX4L3P0CJ86 424 aa12.64□□□□□ -0.39
CHMP3-202ENST00000393773 DUX4L4P0CJ87 422 aa12.64□□□□□ -0.39
CHMP3-202ENST00000393773 DUX4L5P0CJ88 424 aa12.64□□□□□ -0.39
CHMP3-202ENST00000393773 DUX4L6P0CJ89 424 aa12.64□□□□□ -0.39
CHMP3-202ENST00000393773 DUX4L7P0CJ90 424 aa12.64□□□□□ -0.39
CHMP3-202ENST00000393773 GGT2P36268 569 aa12.64□□□□□ -0.39
CHMP3-202ENST00000393773 EGR3Q06889 387 aa12.64□□□□□ -0.39
CHMP3-202ENST00000393773 SEC23BQ15437 767 aa12.64□□□□□ -0.39
CHMP3-202ENST00000393773 MAPRE2Q15555 327 aa12.64□□□□□ -0.39
CHMP3-202ENST00000393773 CDONQ4KMG0 1287 aa12.64□□□□□ -0.39
CHMP3-202ENST00000393773 DUX4L9Q6RFH8 374 aaPredicted RBP12.64□□□□□ -0.39
CHMP3-202ENST00000393773 METAP1DQ6UB28 335 aaPredicted RBP12.64□□□□□ -0.39
CHMP3-202ENST00000393773 ZNF826PQ6ZT77 177 aa12.64□□□□□ -0.39
CHMP3-202ENST00000393773 RRM2BQ7LG56 351 aa12.64□□□□□ -0.39
CHMP3-202ENST00000393773 OR2AE1Q8NHA4 323 aa12.64□□□□□ -0.39
CHMP3-202ENST00000393773 MAP6Q96JE9 813 aa12.64□□□□□ -0.39
CHMP3-202ENST00000393773 MRGBPQ9NV56 204 aa12.64□□□□□ -0.39
CHMP3-202ENST00000393773 C1orf123Q9NWV4 160 aa12.64□□□□□ -0.39
CHMP3-202ENST00000393773 KAAG1Q9UBP8 84 aa12.64□□□□□ -0.39
CHMP3-202ENST00000393773 DUX4Q9UBX2 424 aa12.64□□□□□ -0.39
CHMP3-202ENST00000393773 TRBV4-1A0A0J9YWV2 114 aa12.63□□□□□ -0.39
CHMP3-202ENST00000393773 ZNF816-ZNF321PA0A0X1KG74 233 aa12.63□□□□□ -0.39
CHMP3-202ENST00000393773 A0A1B0GVI7 797 aa12.63□□□□□ -0.39
CHMP3-202ENST00000393773 UNC119BA6NIH7 251 aa12.63□□□□□ -0.39
CHMP3-202ENST00000393773 M0R135 149 aa12.63□□□□□ -0.39
CHMP3-202ENST00000393773 ECDO95905 644 aaPredicted RBP12.63□□□□□ -0.39
CHMP3-202ENST00000393773 SERPINA1P01009 418 aa12.63□□□□□ -0.39
CHMP3-202ENST00000393773 H1F0P07305 194 aaKnown RBP12.63□□□□□ -0.39
CHMP3-202ENST00000393773 FBP1P09467 338 aa12.63□□□□□ -0.39
CHMP3-202ENST00000393773 CSF1P09603 554 aa12.63□□□□□ -0.39
CHMP3-202ENST00000393773 OTX1P32242 354 aaPredicted RBP12.63□□□□□ -0.39
CHMP3-202ENST00000393773 ELF3P78545 371 aaPredicted RBP12.63□□□□□ -0.39
CHMP3-202ENST00000393773 ZNF92Q03936 586 aa12.63□□□□□ -0.39
CHMP3-202ENST00000393773 FGD3Q5JSP0 725 aa12.63□□□□□ -0.39
CHMP3-202ENST00000393773 SAMD5Q5TGI4 173 aa12.63□□□□□ -0.39
CHMP3-202ENST00000393773 SMARCD3Q6STE5 483 aa12.63□□□□□ -0.39
CHMP3-202ENST00000393773 Q6ZPA2 131 aa12.63□□□□□ -0.39
CHMP3-202ENST00000393773 ZBTB46Q86UZ6 589 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms