RNA–Protein interactions for RNA: ENST00000389328.8

TRAPPC9-201, Transcript of trafficking protein particle complex 9, humanhuman

TSL 2 BASIC

Gene TRAPPC9, Length 4,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-201ENST00000389328 NFYBP25208 207 aa11.83□□□□□ -0.52
TRAPPC9-201ENST00000389328 CLDN17P56750 224 aa11.83□□□□□ -0.52
TRAPPC9-201ENST00000389328 RPL7L1Q6DKI1 246 aaKnown RBP11.83□□□□□ -0.52
TRAPPC9-201ENST00000389328 ATOH1Q92858 354 aaPredicted RBP11.83□□□□□ -0.52
TRAPPC9-201ENST00000389328 MRPS24Q96EL2 167 aaKnown RBP11.83□□□□□ -0.52
TRAPPC9-201ENST00000389328 MED9Q9NWA0 146 aa11.83□□□□□ -0.52
TRAPPC9-201ENST00000389328 KLHL13Q9P2N7 655 aa11.83□□□□□ -0.52
TRAPPC9-201ENST00000389328 PADI1Q9ULC6 663 aa11.83□□□□□ -0.52
TRAPPC9-201ENST00000389328 SLC5A6Q9Y289 635 aa11.83□□□□□ -0.52
TRAPPC9-201ENST00000389328 TPRP12270 2363 aaKnown RBP11.83□□□□□ -0.52
TRAPPC9-201ENST00000389328 BLACEA4D250 179 aa11.82□□□□□ -0.52
TRAPPC9-201ENST00000389328 ZNF724A8MTY0 619 aa11.82□□□□□ -0.52
TRAPPC9-201ENST00000389328 HSPB6O14558 160 aa11.82□□□□□ -0.52
TRAPPC9-201ENST00000389328 ST8SIA3O43173 380 aa11.82□□□□□ -0.52
TRAPPC9-201ENST00000389328 BTCP35070 178 aa11.82□□□□□ -0.52
TRAPPC9-201ENST00000389328 EIF2S3P41091 472 aaKnown RBP11.82□□□□□ -0.52
TRAPPC9-201ENST00000389328 PPICP45877 212 aa11.82□□□□□ -0.52
TRAPPC9-201ENST00000389328 HOXA1P49639 335 aaPredicted RBP11.82□□□□□ -0.52
TRAPPC9-201ENST00000389328 HSF1Q00613 529 aa11.82□□□□□ -0.52
TRAPPC9-201ENST00000389328 MIDNQ504T8 468 aa11.82□□□□□ -0.52
TRAPPC9-201ENST00000389328 ATRAIDQ6UW56 229 aa11.82□□□□□ -0.52
TRAPPC9-201ENST00000389328 RTL10Q7L3V2 364 aa11.82□□□□□ -0.52
TRAPPC9-201ENST00000389328 GPR137CQ8N3F9 429 aa11.82□□□□□ -0.52
TRAPPC9-201ENST00000389328 RNF128Q8TEB7 428 aa11.82□□□□□ -0.52
TRAPPC9-201ENST00000389328 IL1F10Q8WWZ1 152 aa11.82□□□□□ -0.52
TRAPPC9-201ENST00000389328 PIGCQ92535 297 aa11.82□□□□□ -0.52
TRAPPC9-201ENST00000389328 CCNL2Q96S94 520 aaPredicted RBP11.82□□□□□ -0.52
TRAPPC9-201ENST00000389328 SOSTQ9BQB4 213 aa11.82□□□□□ -0.52
TRAPPC9-201ENST00000389328 PBOV1Q9GZY1 135 aa11.82□□□□□ -0.52
TRAPPC9-201ENST00000389328 ZNF286AQ9HBT8 521 aa11.82□□□□□ -0.52
TRAPPC9-201ENST00000389328 SUSD2Q9UGT4 822 aa11.82□□□□□ -0.52
TRAPPC9-201ENST00000389328 ZNF749O43361 778 aa11.82□□□□□ -0.52
TRAPPC9-201ENST00000389328 ABOP16442 354 aa11.82□□□□□ -0.52
TRAPPC9-201ENST00000389328 DRD3P35462 400 aa11.82□□□□□ -0.52
TRAPPC9-201ENST00000389328 PSG6Q00889 435 aa11.82□□□□□ -0.52
TRAPPC9-201ENST00000389328 IKZF1Q13422 519 aa11.82□□□□□ -0.52
TRAPPC9-201ENST00000389328 VWA2Q5GFL6 755 aa11.82□□□□□ -0.52
TRAPPC9-201ENST00000389328 C1QL3Q5VWW1 255 aa11.82□□□□□ -0.52
TRAPPC9-201ENST00000389328 NPSR1Q6W5P4 371 aa11.82□□□□□ -0.52
TRAPPC9-201ENST00000389328 CPNE4Q96A23 557 aaPredicted RBP11.82□□□□□ -0.52
TRAPPC9-201ENST00000389328 FBXO17Q96EF6 278 aa11.82□□□□□ -0.52
TRAPPC9-201ENST00000389328 ZCCHC4Q9H5U6 513 aa11.82□□□□□ -0.52
TRAPPC9-201ENST00000389328 SLC17A5Q9NRA2 495 aa11.82□□□□□ -0.52
TRAPPC9-201ENST00000389328 CTSFQ9UBX1 484 aa11.82□□□□□ -0.52
TRAPPC9-201ENST00000389328 ZMAT5Q9UDW3 170 aaKnown RBP11.82□□□□□ -0.52
TRAPPC9-201ENST00000389328 KLHDC2Q9Y2U9 406 aa11.82□□□□□ -0.52
TRAPPC9-201ENST00000389328 ZFP92A6NM28 416 aa11.82□□□□□ -0.52
TRAPPC9-201ENST00000389328 C4orf51C9J302 202 aa11.82□□□□□ -0.52
TRAPPC9-201ENST00000389328 HRKO00198 91 aa11.82□□□□□ -0.52
TRAPPC9-201ENST00000389328 DDAH2O95865 285 aa11.82□□□□□ -0.52
TRAPPC9-201ENST00000389328 MYOGP15173 224 aa11.82□□□□□ -0.52
TRAPPC9-201ENST00000389328 GLRA1P23415 457 aa11.82□□□□□ -0.52
TRAPPC9-201ENST00000389328 YPEL5P62699 121 aa11.82□□□□□ -0.52
TRAPPC9-201ENST00000389328 ZDHHC22Q8N966 263 aa11.82□□□□□ -0.52
TRAPPC9-201ENST00000389328 LURAP1Q96LR2 239 aa11.82□□□□□ -0.52
TRAPPC9-201ENST00000389328 GDF2Q9UK05 429 aaPredicted RBP11.82□□□□□ -0.52
TRAPPC9-201ENST00000389328 TRBV11-1A0A0K0K1C0 115 aa11.82□□□□□ -0.52
TRAPPC9-201ENST00000389328 HSPB2A8KAH6 182 aa11.82□□□□□ -0.52
TRAPPC9-201ENST00000389328 FOLR1P15328 257 aa11.82□□□□□ -0.52
TRAPPC9-201ENST00000389328 RFC3P40938 356 aa11.82□□□□□ -0.52
TRAPPC9-201ENST00000389328 EFNA3P52797 238 aa11.82□□□□□ -0.52
TRAPPC9-201ENST00000389328 HSPB2Q16082 182 aa11.82□□□□□ -0.52
TRAPPC9-201ENST00000389328 SP6Q3SY56 376 aa11.82□□□□□ -0.52
TRAPPC9-201ENST00000389328 PRAMEF20Q5VT98 475 aa11.82□□□□□ -0.52
TRAPPC9-201ENST00000389328 CLEC1AQ8NC01 280 aa11.82□□□□□ -0.52
TRAPPC9-201ENST00000389328 STT3BQ8TCJ2 826 aa11.82□□□□□ -0.52
TRAPPC9-201ENST00000389328 EMG1Q92979 244 aaKnown RBP11.82□□□□□ -0.52
TRAPPC9-201ENST00000389328 NAA11Q9BSU3 229 aaPredicted RBP11.82□□□□□ -0.52
TRAPPC9-201ENST00000389328 C4orf47A7E2U8 309 aa11.81□□□□□ -0.52
TRAPPC9-201ENST00000389328 CRHP06850 196 aa11.81□□□□□ -0.52
TRAPPC9-201ENST00000389328 H2AFB1P0C5Y9 115 aa11.81□□□□□ -0.52
TRAPPC9-201ENST00000389328 CTLA4P16410 223 aa11.81□□□□□ -0.52
TRAPPC9-201ENST00000389328 RAB11AP62491 216 aa11.81□□□□□ -0.52
TRAPPC9-201ENST00000389328 MFAP5Q13361 173 aa11.81□□□□□ -0.52
TRAPPC9-201ENST00000389328 RTL6Q6ICC9 239 aa11.81□□□□□ -0.52
TRAPPC9-201ENST00000389328 OR14L1PQ8NHC6 308 aa11.81□□□□□ -0.52
TRAPPC9-201ENST00000389328 PAPOLGQ9BWT3 736 aaKnown RBP11.81□□□□□ -0.52
TRAPPC9-201ENST00000389328 LAT2Q9GZY6 243 aa11.81□□□□□ -0.52
TRAPPC9-201ENST00000389328 UFSP2Q9NUQ7 469 aa11.81□□□□□ -0.52
TRAPPC9-201ENST00000389328 A0A0G2JK05 382 aa11.81□□□□□ -0.52
TRAPPC9-201ENST00000389328 ABCD4O14678 606 aa11.81□□□□□ -0.52
TRAPPC9-201ENST00000389328 MBTPS2O43462 519 aa11.81□□□□□ -0.52
TRAPPC9-201ENST00000389328 EIF4E2O60573 245 aaKnown RBP11.81□□□□□ -0.52
TRAPPC9-201ENST00000389328 DUS4LO95620 317 aaKnown RBP11.81□□□□□ -0.52
TRAPPC9-201ENST00000389328 BPNT1O95861 308 aa11.81□□□□□ -0.52
TRAPPC9-201ENST00000389328 THY1P04216 161 aa11.81□□□□□ -0.52
TRAPPC9-201ENST00000389328 ARG1P05089 322 aa11.81□□□□□ -0.52
TRAPPC9-201ENST00000389328 TBPP20226 339 aa11.81□□□□□ -0.52
TRAPPC9-201ENST00000389328 ASCL1P50553 236 aa11.81□□□□□ -0.52
TRAPPC9-201ENST00000389328 GUK1Q16774 197 aa11.81□□□□□ -0.52
TRAPPC9-201ENST00000389328 MRGPREQ86SM8 312 aa11.81□□□□□ -0.52
TRAPPC9-201ENST00000389328 MRPL41Q8IXM3 137 aaKnown RBP11.81□□□□□ -0.52
TRAPPC9-201ENST00000389328 ZFP62Q8NB50 900 aaPredicted RBP11.81□□□□□ -0.52
TRAPPC9-201ENST00000389328 OR5AP2Q8NGF4 316 aa11.81□□□□□ -0.52
TRAPPC9-201ENST00000389328 OR52N4Q8NGI2 321 aa11.81□□□□□ -0.52
TRAPPC9-201ENST00000389328 ULBP2Q9BZM5 246 aa11.81□□□□□ -0.52
TRAPPC9-201ENST00000389328 C9J4A7 227 aa11.81□□□□□ -0.52
TRAPPC9-201ENST00000389328 KLK3P07288 261 aaPredicted RBP11.81□□□□□ -0.52
TRAPPC9-201ENST00000389328 HNRNPKP61978 463 aaKnown RBP eCLIP11.81□□□□□ -0.524e-6■□□□□ 8.7
TRAPPC9-201ENST00000389328 ZNF266Q14584 549 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms