RNA–Protein interactions for RNA: ENST00000383836.7

SRGAP3-202, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRGAP3, Length 8,656 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-202ENST00000383836 BLNKQ8WV28 456 aa11.33□□□□□ -0.6
SRGAP3-202ENST00000383836 SEC11CQ9BY50 192 aa11.33□□□□□ -0.6
SRGAP3-202ENST00000383836 GPR62Q9BZJ7 368 aa11.33□□□□□ -0.6
SRGAP3-202ENST00000383836 RBM38Q9H0Z9 239 aaKnown RBP11.33□□□□□ -0.6
SRGAP3-202ENST00000383836 ZNF98A6NK75 572 aa11.33□□□□□ -0.6
SRGAP3-202ENST00000383836 ENSAO43768 121 aaKnown RBP11.33□□□□□ -0.6
SRGAP3-202ENST00000383836 OR7C2O60412 319 aa11.33□□□□□ -0.6
SRGAP3-202ENST00000383836 CTNSO60931 367 aa11.33□□□□□ -0.6
SRGAP3-202ENST00000383836 TMEM25Q86YD3 366 aa11.33□□□□□ -0.6
SRGAP3-202ENST00000383836 SYS1Q8N2H4 156 aa11.33□□□□□ -0.6
SRGAP3-202ENST00000383836 PIGTQ969N2 578 aa11.33□□□□□ -0.6
SRGAP3-202ENST00000383836 ISG20L2Q9H9L3 353 aaKnown RBP11.33□□□□□ -0.6
SRGAP3-202ENST00000383836 FGF20Q9NP95 211 aaPredicted RBP11.33□□□□□ -0.6
SRGAP3-202ENST00000383836 PISDQ9UG56 409 aa11.33□□□□□ -0.6
SRGAP3-202ENST00000383836 DEGS1O15121 323 aa11.33□□□□□ -0.6
SRGAP3-202ENST00000383836 HRO43593 1189 aa11.33□□□□□ -0.6
SRGAP3-202ENST00000383836 IQCF3P0C7M6 154 aa11.33□□□□□ -0.6
SRGAP3-202ENST00000383836 HIST1H1CP16403 213 aaKnown RBP11.33□□□□□ -0.6
SRGAP3-202ENST00000383836 SCD5Q86SK9 330 aa11.33□□□□□ -0.6
SRGAP3-202ENST00000383836 RBM45Q8IUH3 476 aaKnown RBP11.33□□□□□ -0.6
SRGAP3-202ENST00000383836 CIB3Q96Q77 187 aaPredicted RBP11.33□□□□□ -0.6
SRGAP3-202ENST00000383836 TAAR2Q9P1P5 351 aa11.33□□□□□ -0.6
SRGAP3-202ENST00000383836 TET1Q8NFU7 2136 aa11.33□□□□□ -0.6
SRGAP3-202ENST00000383836 TRBV11-1A0A0K0K1C0 115 aa11.32□□□□□ -0.6
SRGAP3-202ENST00000383836 HMX2A2RU54 273 aa11.32□□□□□ -0.6
SRGAP3-202ENST00000383836 ELFN2Q5R3F8 820 aa11.32□□□□□ -0.6
SRGAP3-202ENST00000383836 FAM71CQ8NEG0 241 aa11.32□□□□□ -0.6
SRGAP3-202ENST00000383836 FAM117AQ9C073 453 aa11.32□□□□□ -0.6
SRGAP3-202ENST00000383836 PSENENQ9NZ42 101 aa11.32□□□□□ -0.6
SRGAP3-202ENST00000383836 PLXNB2O15031 1838 aa11.32□□□□□ -0.6
SRGAP3-202ENST00000383836 PSME4Q14997 1843 aa11.32□□□□□ -0.6
SRGAP3-202ENST00000383836 TAF1LQ8IZX4 1826 aa11.32□□□□□ -0.6
SRGAP3-202ENST00000383836 ZNF195O14628 629 aa11.32□□□□□ -0.6
SRGAP3-202ENST00000383836 ABCD3P28288 659 aa11.32□□□□□ -0.6
SRGAP3-202ENST00000383836 AMTP48728 403 aa11.32□□□□□ -0.6
SRGAP3-202ENST00000383836 ZNF542PQ5EBM4 170 aa11.32□□□□□ -0.6
SRGAP3-202ENST00000383836 SLC35E1Q96K37 410 aa11.32□□□□□ -0.6
SRGAP3-202ENST00000383836 BARHL1Q9BZE3 327 aa11.32□□□□□ -0.6
SRGAP3-202ENST00000383836 BMPR1BO00238 502 aa11.32□□□□□ -0.6
SRGAP3-202ENST00000383836 UTS2O95399 124 aa11.32□□□□□ -0.6
SRGAP3-202ENST00000383836 OPN1LWP04000 364 aa11.32□□□□□ -0.6
SRGAP3-202ENST00000383836 BMPR1AP36894 532 aa11.32□□□□□ -0.6
SRGAP3-202ENST00000383836 TPBGQ13641 420 aa11.32□□□□□ -0.6
SRGAP3-202ENST00000383836 ABHD17BQ5VST6 288 aa11.32□□□□□ -0.6
SRGAP3-202ENST00000383836 CDC20BQ86Y33 519 aa11.32□□□□□ -0.6
SRGAP3-202ENST00000383836 TRIB1Q96RU8 372 aa11.32□□□□□ -0.6
SRGAP3-202ENST00000383836 MS4A8Q9BY19 250 aa11.32□□□□□ -0.6
SRGAP3-202ENST00000383836 HINT3Q9NQE9 182 aaKnown RBP11.32□□□□□ -0.6
SRGAP3-202ENST00000383836 PPT2Q9UMR5 302 aa11.32□□□□□ -0.6
SRGAP3-202ENST00000383836 SLC25A4P12235 298 aa11.32□□□□□ -0.6
SRGAP3-202ENST00000383836 CD200P41217 278 aa11.32□□□□□ -0.6
SRGAP3-202ENST00000383836 C11orf42Q8N5U0 333 aa11.32□□□□□ -0.6
SRGAP3-202ENST00000383836 OR10C1Q96KK4 312 aa11.32□□□□□ -0.6
SRGAP3-202ENST00000383836 WDR83Q9BRX9 315 aaKnown RBP11.32□□□□□ -0.6
SRGAP3-202ENST00000383836 RIMS4Q9H426 269 aaPredicted RBP11.32□□□□□ -0.6
SRGAP3-202ENST00000383836 NDUFB6O95139 128 aa11.32□□□□□ -0.6
SRGAP3-202ENST00000383836 STPG2Q8N412 459 aa11.32□□□□□ -0.6
SRGAP3-202ENST00000383836 STACQ99469 402 aa11.32□□□□□ -0.6
SRGAP3-202ENST00000383836 PLSCR1O15162 318 aa11.32□□□□□ -0.6
SRGAP3-202ENST00000383836 CYHR1Q6ZMK1 362 aa11.32□□□□□ -0.6
SRGAP3-202ENST00000383836 WSB1Q9Y6I7 421 aa11.32□□□□□ -0.6
SRGAP3-202ENST00000383836 IGKV6-21A0A0C4DH24 114 aa11.32□□□□□ -0.6
SRGAP3-202ENST00000383836 ZNF814B7Z6K7 855 aa11.32□□□□□ -0.6
SRGAP3-202ENST00000383836 CLEC3BP05452 202 aa11.32□□□□□ -0.6
SRGAP3-202ENST00000383836 ZNF17P17021 662 aa11.32□□□□□ -0.6
SRGAP3-202ENST00000383836 DHODHQ02127 395 aa11.32□□□□□ -0.6
SRGAP3-202ENST00000383836 C19orf57Q0VDD7 668 aa11.32□□□□□ -0.6
SRGAP3-202ENST00000383836 PRR14Q9BWN1 585 aa11.32□□□□□ -0.6
SRGAP3-202ENST00000383836 HMGN4O00479 90 aa11.31□□□□□ -0.6
SRGAP3-202ENST00000383836 TTRP02766 147 aa11.31□□□□□ -0.6
SRGAP3-202ENST00000383836 OPN1MWP04001 364 aa11.31□□□□□ -0.6
SRGAP3-202ENST00000383836 OPN1MW2P0DN77 364 aa11.31□□□□□ -0.6
SRGAP3-202ENST00000383836 OPN1MW3P0DN78 364 aa11.31□□□□□ -0.6
SRGAP3-202ENST00000383836 ENPP1P22413 925 aa11.31□□□□□ -0.6
SRGAP3-202ENST00000383836 CDK5R1Q15078 307 aa11.31□□□□□ -0.6
SRGAP3-202ENST00000383836 FAM209BQ5JX69 171 aa11.31□□□□□ -0.6
SRGAP3-202ENST00000383836 USP53Q70EK8 1073 aa11.31□□□□□ -0.6
SRGAP3-202ENST00000383836 DTWD2Q8NBA8 298 aa11.31□□□□□ -0.6
SRGAP3-202ENST00000383836 FTSJ1Q9UET6 329 aa11.31□□□□□ -0.6
SRGAP3-202ENST00000383836 OR5H15A6NDH6 313 aa11.31□□□□□ -0.6
SRGAP3-202ENST00000383836 OR5H1A6NKK0 313 aa11.31□□□□□ -0.6
SRGAP3-202ENST00000383836 SLC2A10O95528 541 aa11.31□□□□□ -0.6
SRGAP3-202ENST00000383836 GSTP1P09211 210 aaKnown RBP11.31□□□□□ -0.6
SRGAP3-202ENST00000383836 LIMS3P0CW19 117 aa11.31□□□□□ -0.6
SRGAP3-202ENST00000383836 LIMS4P0CW20 117 aa11.31□□□□□ -0.6
SRGAP3-202ENST00000383836 F2RP25116 425 aa11.31□□□□□ -0.6
SRGAP3-202ENST00000383836 STUMQ69YW2 141 aa11.31□□□□□ -0.6
SRGAP3-202ENST00000383836 FA2HQ7L5A8 372 aa11.31□□□□□ -0.6
SRGAP3-202ENST00000383836 ZNF426Q9BUY5 554 aa11.31□□□□□ -0.6
SRGAP3-202ENST00000383836 HSFX1Q9UBD0 423 aa11.31□□□□□ -0.6
SRGAP3-202ENST00000383836 PPP1R3CQ9UQK1 317 aa11.31□□□□□ -0.6
SRGAP3-202ENST00000383836 SDCBPO00560 298 aaPredicted RBP11.31□□□□□ -0.6
SRGAP3-202ENST00000383836 MRPL33O75394 65 aaKnown RBP11.31□□□□□ -0.6
SRGAP3-202ENST00000383836 BPIFB3P59826 476 aa11.31□□□□□ -0.6
SRGAP3-202ENST00000383836 PFN3P60673 137 aa11.31□□□□□ -0.6
SRGAP3-202ENST00000383836 TMEM176BQ3YBM2 270 aaPredicted RBP11.31□□□□□ -0.6
SRGAP3-202ENST00000383836 PKDCCQ504Y2 493 aa11.31□□□□□ -0.6
SRGAP3-202ENST00000383836 NCMAPQ5T1S8 102 aa11.31□□□□□ -0.6
SRGAP3-202ENST00000383836 IFI44Q8TCB0 444 aa11.31□□□□□ -0.6
SRGAP3-202ENST00000383836 ST6GAL2Q96JF0 529 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms