RNA–Protein interactions for RNA: ENST00000381342.6

SNRPB-201, Transcript of small nuclear ribonucleoprotein polypeptides B and B1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SNRPB, Length 1,154 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPB-201ENST00000381342 TUBG1P23258 451 aa13.8□□□□□ -0.2
SNRPB-201ENST00000381342 MMP15P51511 669 aa13.8□□□□□ -0.2
SNRPB-201ENST00000381342 ROM1Q03395 351 aa13.8□□□□□ -0.2
SNRPB-201ENST00000381342 MALLQ13021 153 aa13.8□□□□□ -0.2
SNRPB-201ENST00000381342 IL18R1Q13478 541 aa13.8□□□□□ -0.2
SNRPB-201ENST00000381342 GK2Q14410 553 aaPredicted RBP13.8□□□□□ -0.2
SNRPB-201ENST00000381342 GLYATL3Q5SZD4 288 aa13.8□□□□□ -0.2
SNRPB-201ENST00000381342 IZUMO2Q6UXV1 221 aa13.8□□□□□ -0.2
SNRPB-201ENST00000381342 PLEKHG7Q6ZR37 379 aa13.8□□□□□ -0.2
SNRPB-201ENST00000381342 PRSS45Q7RTY3 260 aa13.8□□□□□ -0.2
SNRPB-201ENST00000381342 ZNF679Q8IYX0 411 aa13.8□□□□□ -0.2
SNRPB-201ENST00000381342 C8orf59Q8N0T1 100 aaPredicted RBP13.8□□□□□ -0.2
SNRPB-201ENST00000381342 OR5AS1Q8N127 324 aa13.8□□□□□ -0.2
SNRPB-201ENST00000381342 OR2T27Q8NH04 317 aa13.8□□□□□ -0.2
SNRPB-201ENST00000381342 LGALS12Q96DT0 336 aa13.8□□□□□ -0.2
SNRPB-201ENST00000381342 Q96MT0 163 aa13.8□□□□□ -0.2
SNRPB-201ENST00000381342 MROQ9BYG7 248 aa13.8□□□□□ -0.2
SNRPB-201ENST00000381342 REG4Q9BYZ8 158 aa13.8□□□□□ -0.2
SNRPB-201ENST00000381342 VCX3BQ9H321 246 aa13.8□□□□□ -0.2
SNRPB-201ENST00000381342 TUBG2Q9NRH3 451 aa13.8□□□□□ -0.2
SNRPB-201ENST00000381342 GPR160Q9UJ42 338 aa13.8□□□□□ -0.2
SNRPB-201ENST00000381342 ZSCAN5BA6NJL1 495 aa13.79□□□□□ -0.2
SNRPB-201ENST00000381342 APOC1P02654 83 aa13.79□□□□□ -0.2
SNRPB-201ENST00000381342 RAC2P15153 192 aa13.79□□□□□ -0.2
SNRPB-201ENST00000381342 KITLGP21583 273 aa13.79□□□□□ -0.2
SNRPB-201ENST00000381342 RIDAP52758 137 aaKnown RBP13.79□□□□□ -0.2
SNRPB-201ENST00000381342 ISL1P61371 349 aa13.79□□□□□ -0.2
SNRPB-201ENST00000381342 ZNF85Q03923 595 aa13.79□□□□□ -0.2
SNRPB-201ENST00000381342 ZNF92Q03936 586 aa13.79□□□□□ -0.2
SNRPB-201ENST00000381342 MFGE8Q08431 387 aaPredicted RBP13.79□□□□□ -0.2
SNRPB-201ENST00000381342 GFOD2Q3B7J2 385 aa13.79□□□□□ -0.2
SNRPB-201ENST00000381342 OR2T2Q6IF00 324 aa13.79□□□□□ -0.2
SNRPB-201ENST00000381342 DEGS2Q6QHC5 323 aa13.79□□□□□ -0.2
SNRPB-201ENST00000381342 USP51Q70EK9 711 aa13.79□□□□□ -0.2
SNRPB-201ENST00000381342 MRPL21Q7Z2W9 205 aaKnown RBP13.79□□□□□ -0.2
SNRPB-201ENST00000381342 BHLHE23Q8NDY6 225 aa13.79□□□□□ -0.2
SNRPB-201ENST00000381342 TFAP2CQ92754 450 aa13.79□□□□□ -0.2
SNRPB-201ENST00000381342 HAVCR1Q96D42 359 aa13.79□□□□□ -0.2
SNRPB-201ENST00000381342 PGAM5Q96HS1 289 aa13.79□□□□□ -0.2
SNRPB-201ENST00000381342 RAB1BQ9H0U4 201 aa13.79□□□□□ -0.2
SNRPB-201ENST00000381342 NIPAL2Q9H841 368 aa13.79□□□□□ -0.2
SNRPB-201ENST00000381342 MSL2Q9HCI7 577 aa13.79□□□□□ -0.2
SNRPB-201ENST00000381342 MRM2Q9UI43 246 aaKnown RBP13.79□□□□□ -0.2
SNRPB-201ENST00000381342 FLNAP21333 2647 aaKnown RBP13.78□□□□□ -0.2
SNRPB-201ENST00000381342 PLSCR5A0PG75 271 aa13.78□□□□□ -0.2
SNRPB-201ENST00000381342 C17orf100A8MU93 164 aa13.78□□□□□ -0.2
SNRPB-201ENST00000381342 H0YJX3 145 aa13.78□□□□□ -0.2
SNRPB-201ENST00000381342 J3QRE1 110 aa13.78□□□□□ -0.2
SNRPB-201ENST00000381342 XRCC2O43543 280 aa13.78□□□□□ -0.2
SNRPB-201ENST00000381342 ZNF254O75437 659 aa13.78□□□□□ -0.2
SNRPB-201ENST00000381342 NCR1O76036 304 aa13.78□□□□□ -0.2
SNRPB-201ENST00000381342 MT-ND5P03915 603 aa13.78□□□□□ -0.2
SNRPB-201ENST00000381342 ERCC1P07992 297 aaPredicted RBP13.78□□□□□ -0.2
SNRPB-201ENST00000381342 CSF3P09919 207 aa13.78□□□□□ -0.2
SNRPB-201ENST00000381342 ZNF81P51508 661 aa13.78□□□□□ -0.2
SNRPB-201ENST00000381342 EFNA4P52798 201 aa13.78□□□□□ -0.2
SNRPB-201ENST00000381342 EGR3Q06889 387 aa13.78□□□□□ -0.2
SNRPB-201ENST00000381342 PGAP1Q75T13 922 aa13.78□□□□□ -0.2
SNRPB-201ENST00000381342 POM121Q96HA1 1249 aa13.78□□□□□ -0.2
SNRPB-201ENST00000381342 MS4A5Q9H3V2 200 aa13.78□□□□□ -0.2
SNRPB-201ENST00000381342 FAM206AQ9NX38 181 aa13.78□□□□□ -0.2
SNRPB-201ENST00000381342 ZNF319Q9P2F9 582 aa13.78□□□□□ -0.2
SNRPB-201ENST00000381342 EXOGQ9Y2C4 368 aaKnown RBP13.78□□□□□ -0.2
SNRPB-201ENST00000381342 TANC2Q9HCD6 1990 aa13.78□□□□□ -0.2
SNRPB-201ENST00000381342 DAPL1A0PJW8 107 aa13.77□□□□□ -0.21
SNRPB-201ENST00000381342 SPRY3O43610 288 aa13.77□□□□□ -0.21
SNRPB-201ENST00000381342 LILRA1O75019 489 aa13.77□□□□□ -0.21
SNRPB-201ENST00000381342 KRT8P05787 483 aa13.77□□□□□ -0.21
SNRPB-201ENST00000381342 MTORP42345 2549 aa13.77□□□□□ -0.21
SNRPB-201ENST00000381342 MAGEB1P43366 347 aa13.77□□□□□ -0.21
SNRPB-201ENST00000381342 ACTC1P68032 377 aa13.77□□□□□ -0.21
SNRPB-201ENST00000381342 ACTA1P68133 377 aa13.77□□□□□ -0.21
SNRPB-201ENST00000381342 MOGQ16653 247 aa13.77□□□□□ -0.21
SNRPB-201ENST00000381342 TIGD6Q17RP2 521 aa13.77□□□□□ -0.21
SNRPB-201ENST00000381342 ZNF829Q3KNS6 432 aaPredicted RBP13.77□□□□□ -0.21
SNRPB-201ENST00000381342 Q6ZR03 302 aa13.77□□□□□ -0.21
SNRPB-201ENST00000381342 ZNF525Q8N782 197 aa13.77□□□□□ -0.21
SNRPB-201ENST00000381342 YIPF7Q8N8F6 280 aa13.77□□□□□ -0.21
SNRPB-201ENST00000381342 OR8B12Q8NGG6 310 aa13.77□□□□□ -0.21
SNRPB-201ENST00000381342 OR52H1Q8NGJ2 320 aa13.77□□□□□ -0.21
SNRPB-201ENST00000381342 OR52I1Q8NGK6 324 aa13.77□□□□□ -0.21
SNRPB-201ENST00000381342 OR10A2Q9H208 303 aa13.77□□□□□ -0.21
SNRPB-201ENST00000381342 SP140LQ9H930 580 aa13.77□□□□□ -0.21
SNRPB-201ENST00000381342 GTF2A1LQ9UNN4 478 aa13.77□□□□□ -0.21
SNRPB-201ENST00000381342 MYRFQ9Y2G1 1151 aa13.77□□□□□ -0.21
SNRPB-201ENST00000381342 RPL36Q9Y3U8 105 aaKnown RBP13.77□□□□□ -0.21
SNRPB-201ENST00000381342 HSPE1-MOB4S4R3N1 261 aa13.77□□□□□ -0.21
SNRPB-201ENST00000381342 TMEM269A0A1B0GVZ9 245 aa13.76□□□□□ -0.21
SNRPB-201ENST00000381342 IQCF6A8MYZ5 107 aa13.76□□□□□ -0.21
SNRPB-201ENST00000381342 SRSF10O75494 262 aaKnown RBP13.76□□□□□ -0.21
SNRPB-201ENST00000381342 PNPP00491 289 aa13.76□□□□□ -0.21
SNRPB-201ENST00000381342 F12P00748 615 aaPredicted RBP13.76□□□□□ -0.21
SNRPB-201ENST00000381342 IGHV1-46P01743 117 aa13.76□□□□□ -0.21
SNRPB-201ENST00000381342 CCL8P80075 99 aa13.76□□□□□ -0.21
SNRPB-201ENST00000381342 RAB40BQ12829 278 aa13.76□□□□□ -0.21
SNRPB-201ENST00000381342 CDK5R2Q13319 367 aa13.76□□□□□ -0.21
SNRPB-201ENST00000381342 TSTQ16762 297 aaKnown RBP13.76□□□□□ -0.21
SNRPB-201ENST00000381342 KRTAP21-3Q3LHN1 58 aa13.76□□□□□ -0.21
SNRPB-201ENST00000381342 TP53I3Q53FA7 332 aa13.76□□□□□ -0.21
SNRPB-201ENST00000381342 ZNF684Q5T5D7 378 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms