RNA–Protein interactions for RNA: ENST00000380871.4

NKX3-1-201, Transcript of NK3 homeobox 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NKX3-1, Length 3,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-1-201ENST00000380871 EDAQ92838 391 aa14.46□□□□□ -0.1
NKX3-1-201ENST00000380871 SOX7Q9BT81 388 aa14.46□□□□□ -0.1
NKX3-1-201ENST00000380871 SAV1Q9H4B6 383 aaPredicted RBP14.46□□□□□ -0.1
NKX3-1-201ENST00000380871 GAREM1Q9H706 876 aa14.46□□□□□ -0.1
NKX3-1-201ENST00000380871 PCDHB16Q9NRJ7 776 aa14.46□□□□□ -0.1
NKX3-1-201ENST00000380871 SLC39A1Q9NY26 324 aa14.46□□□□□ -0.1
NKX3-1-201ENST00000380871 KCNK7Q9Y2U2 307 aa14.46□□□□□ -0.1
NKX3-1-201ENST00000380871 A8MVM7 634 aa14.45□□□□□ -0.1
NKX3-1-201ENST00000380871 K7ESF4 209 aa14.45□□□□□ -0.1
NKX3-1-201ENST00000380871 MT-ATP6P00846 226 aa14.45□□□□□ -0.1
NKX3-1-201ENST00000380871 PGAM2P15259 253 aa14.45□□□□□ -0.1
NKX3-1-201ENST00000380871 SLC26A5P58743 744 aa14.45□□□□□ -0.1
NKX3-1-201ENST00000380871 DCAF7P61962 342 aa14.45□□□□□ -0.1
NKX3-1-201ENST00000380871 ZNF345Q14585 488 aa14.45□□□□□ -0.1
NKX3-1-201ENST00000380871 PAN3Q58A45 887 aaKnown RBP14.45□□□□□ -0.1
NKX3-1-201ENST00000380871 DNASE2BQ8WZ79 361 aa14.45□□□□□ -0.1
NKX3-1-201ENST00000380871 CRB3Q9BUF7 120 aa14.45□□□□□ -0.1
NKX3-1-201ENST00000380871 SELENOIQ9C0D9 397 aa14.45□□□□□ -0.1
NKX3-1-201ENST00000380871 RAB33BQ9H082 229 aa14.45□□□□□ -0.1
NKX3-1-201ENST00000380871 TNRC18O15417 2968 aaPredicted RBP14.45□□□□□ -0.1
NKX3-1-201ENST00000380871 VSIG8P0DPA2 414 aa14.45□□□□□ -0.1
NKX3-1-201ENST00000380871 SLC25A4P12235 298 aa14.45□□□□□ -0.1
NKX3-1-201ENST00000380871 ZNF823P16415 610 aa14.45□□□□□ -0.1
NKX3-1-201ENST00000380871 GALNSP34059 522 aa14.45□□□□□ -0.1
NKX3-1-201ENST00000380871 PNLIPRP2P54317 469 aa14.45□□□□□ -0.1
NKX3-1-201ENST00000380871 PRAMEF20Q5VT98 475 aa14.45□□□□□ -0.1
NKX3-1-201ENST00000380871 ZNF813Q6ZN06 617 aa14.45□□□□□ -0.1
NKX3-1-201ENST00000380871 NUP54Q7Z3B4 507 aa14.45□□□□□ -0.1
NKX3-1-201ENST00000380871 OR13C9Q8NGT0 318 aa14.45□□□□□ -0.1
NKX3-1-201ENST00000380871 MARCH1Q8TCQ1 289 aa14.45□□□□□ -0.1
NKX3-1-201ENST00000380871 RARRES3Q9UL19 164 aa14.45□□□□□ -0.1
NKX3-1-201ENST00000380871 C5orf51A6NDU8 294 aa14.44□□□□□ -0.1
NKX3-1-201ENST00000380871 OR6C76A6NM76 312 aa14.44□□□□□ -0.1
NKX3-1-201ENST00000380871 G3V3Y1 287 aa14.44□□□□□ -0.1
NKX3-1-201ENST00000380871 FOSL2P15408 326 aa14.44□□□□□ -0.1
NKX3-1-201ENST00000380871 PI3P19957 117 aa14.44□□□□□ -0.1
NKX3-1-201ENST00000380871 POU3F1Q03052 451 aaPredicted RBP14.44□□□□□ -0.1
NKX3-1-201ENST00000380871 C1orf100Q5SVJ3 147 aa14.44□□□□□ -0.1
NKX3-1-201ENST00000380871 TMEM17Q86X19 198 aa14.44□□□□□ -0.1
NKX3-1-201ENST00000380871 ZNF248Q8NDW4 579 aa14.44□□□□□ -0.1
NKX3-1-201ENST00000380871 MAFAQ8NHW3 353 aaPredicted RBP14.44□□□□□ -0.1
NKX3-1-201ENST00000380871 MITD1Q8WV92 249 aa14.44□□□□□ -0.1
NKX3-1-201ENST00000380871 SLCO5A1Q9H2Y9 848 aa14.44□□□□□ -0.1
NKX3-1-201ENST00000380871 TMEM231Q9H6L2 316 aa14.44□□□□□ -0.1
NKX3-1-201ENST00000380871 MYOZ1Q9NP98 299 aaPredicted RBP14.44□□□□□ -0.1
NKX3-1-201ENST00000380871 OCIAD1Q9NX40 245 aa14.44□□□□□ -0.1
NKX3-1-201ENST00000380871 GPR179Q6PRD1 2367 aa14.44□□□□□ -0.1
NKX3-1-201ENST00000380871 NCOR1O75376 2440 aa14.44□□□□□ -0.1
NKX3-1-201ENST00000380871 LOC390937A0A1W2PQ73 354 aa14.44□□□□□ -0.1
NKX3-1-201ENST00000380871 MS4A18H0YCH9 400 aa14.44□□□□□ -0.1
NKX3-1-201ENST00000380871 SSX5O60225 188 aa14.44□□□□□ -0.1
NKX3-1-201ENST00000380871 ACTL6AO96019 429 aa14.44□□□□□ -0.1
NKX3-1-201ENST00000380871 MS4A18Q3C1V0 323 aa14.44□□□□□ -0.1
NKX3-1-201ENST00000380871 CARD17Q5XLA6 110 aa14.44□□□□□ -0.1
NKX3-1-201ENST00000380871 TMEM71Q6P5X7 295 aa14.44□□□□□ -0.1
NKX3-1-201ENST00000380871 ANKRD37Q7Z713 158 aa14.44□□□□□ -0.1
NKX3-1-201ENST00000380871 CBLN2Q8IUK8 224 aa14.44□□□□□ -0.1
NKX3-1-201ENST00000380871 PUSL1Q8N0Z8 303 aaKnown RBP14.44□□□□□ -0.1
NKX3-1-201ENST00000380871 PAQR8Q8TEZ7 354 aa14.44□□□□□ -0.1
NKX3-1-201ENST00000380871 ASB13Q8WXK3 278 aa14.44□□□□□ -0.1
NKX3-1-201ENST00000380871 RRNAD1Q96FB5 475 aaKnown RBP14.44□□□□□ -0.1
NKX3-1-201ENST00000380871 PRRT1Q99946 306 aa14.44□□□□□ -0.1
NKX3-1-201ENST00000380871 MPTX1A8MV57 137 aa14.44□□□□□ -0.1
NKX3-1-201ENST00000380871 SLC2A1P11166 492 aa14.44□□□□□ -0.1
NKX3-1-201ENST00000380871 SRSF4Q08170 494 aaKnown RBP14.44□□□□□ -0.1
NKX3-1-201ENST00000380871 PHB2Q99623 299 aa14.44□□□□□ -0.1
NKX3-1-201ENST00000380871 SMOC1Q9H4F8 434 aa14.44□□□□□ -0.1
NKX3-1-201ENST00000380871 CSAG2Q9Y5P2 127 aa14.44□□□□□ -0.1
NKX3-1-201ENST00000380871 EFSO43281 561 aa14.43□□□□□ -0.1
NKX3-1-201ENST00000380871 TTRP02766 147 aa14.43□□□□□ -0.1
NKX3-1-201ENST00000380871 CELA2AP08217 269 aa14.43□□□□□ -0.1
NKX3-1-201ENST00000380871 H2BFMP0C1H6 154 aa14.43□□□□□ -0.1
NKX3-1-201ENST00000380871 CD37P11049 281 aa14.43□□□□□ -0.1
NKX3-1-201ENST00000380871 SFTPDP35247 375 aa14.43□□□□□ -0.1
NKX3-1-201ENST00000380871 HLA-BQ31612 363 aa14.43□□□□□ -0.1
NKX3-1-201ENST00000380871 HIST2H2ABQ8IUE6 130 aaPredicted RBP14.43□□□□□ -0.1
NKX3-1-201ENST00000380871 THAP6Q8TBB0 222 aa14.43□□□□□ -0.1
NKX3-1-201ENST00000380871 CCDC74BQ96LY2 380 aa14.43□□□□□ -0.1
NKX3-1-201ENST00000380871 CDX2Q99626 313 aaPredicted RBP14.43□□□□□ -0.1
NKX3-1-201ENST00000380871 DNTTIP1Q9H147 329 aa14.43□□□□□ -0.1
NKX3-1-201ENST00000380871 HPF1Q9NWY4 346 aa14.43□□□□□ -0.1
NKX3-1-201ENST00000380871 RPH3AQ9Y2J0 694 aaPredicted RBP14.43□□□□□ -0.1
NKX3-1-201ENST00000380871 A0A0B4J2A0 478 aa14.43□□□□□ -0.1
NKX3-1-201ENST00000380871 A0A1W2PP11 408 aa14.43□□□□□ -0.1
NKX3-1-201ENST00000380871 FTCDNL1E5RQL4 147 aa14.43□□□□□ -0.1
NKX3-1-201ENST00000380871 ABCD4O14678 606 aa14.43□□□□□ -0.1
NKX3-1-201ENST00000380871 OR2J2O76002 312 aa14.43□□□□□ -0.1
NKX3-1-201ENST00000380871 CRABP1P29762 137 aa14.43□□□□□ -0.1
NKX3-1-201ENST00000380871 SERPINF1P36955 418 aa14.43□□□□□ -0.1
NKX3-1-201ENST00000380871 MEF2DQ14814 521 aa14.43□□□□□ -0.1
NKX3-1-201ENST00000380871 RAB12Q6IQ22 244 aa14.43□□□□□ -0.1
NKX3-1-201ENST00000380871 LPCAT3Q6P1A2 487 aa14.43□□□□□ -0.1
NKX3-1-201ENST00000380871 GRINAQ7Z429 371 aa14.43□□□□□ -0.1
NKX3-1-201ENST00000380871 INO80EQ8NBZ0 244 aaPredicted RBP14.43□□□□□ -0.1
NKX3-1-201ENST00000380871 APCDD1LQ8NCL9 501 aa14.43□□□□□ -0.1
NKX3-1-201ENST00000380871 ELP5Q8TE02 316 aa14.43□□□□□ -0.1
NKX3-1-201ENST00000380871 TSNAXQ99598 290 aaKnown RBP14.43□□□□□ -0.1
NKX3-1-201ENST00000380871 METTL7AQ9H8H3 244 aa14.43□□□□□ -0.1
NKX3-1-201ENST00000380871 SHPKQ9UHJ6 478 aa14.43□□□□□ -0.1
NKX3-1-201ENST00000380871 COLQQ9Y215 455 aaPredicted RBP14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms