RNA–Protein interactions for RNA: ENST00000380097.7

TRIM6-202, Transcript of tripartite motif containing 6, humanhuman

TSL 1 (best) BASIC

Gene TRIM6, Length 3,403 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM6-202ENST00000380097 LSM5Q9Y4Y9 91 aaKnown RBP6.54□□□□□ -1.36
TRIM6-202ENST00000380097 CHD9Q3L8U1 2897 aa6.54□□□□□ -1.36
TRIM6-202ENST00000380097 A0A0A6YYH2 397 aa6.54□□□□□ -1.36
TRIM6-202ENST00000380097 MEGF11A6BM72 1044 aa6.54□□□□□ -1.36
TRIM6-202ENST00000380097 A6NJ64 397 aa6.54□□□□□ -1.36
TRIM6-202ENST00000380097 MARCH11A6NNE9 402 aa6.54□□□□□ -1.36
TRIM6-202ENST00000380097 H7C1C5 153 aa6.54□□□□□ -1.36
TRIM6-202ENST00000380097 HIST1H2BKO60814 126 aa6.54□□□□□ -1.36
TRIM6-202ENST00000380097 APBB3O95704 486 aa6.54□□□□□ -1.36
TRIM6-202ENST00000380097 HIST1H2BJP06899 126 aa6.54□□□□□ -1.36
TRIM6-202ENST00000380097 SOD3P08294 240 aa6.54□□□□□ -1.36
TRIM6-202ENST00000380097 SERPINA2P20848 420 aa6.54□□□□□ -1.36
TRIM6-202ENST00000380097 HIST1H2BOP23527 126 aa6.54□□□□□ -1.36
TRIM6-202ENST00000380097 HIST1H2BBP33778 126 aa6.54□□□□□ -1.36
TRIM6-202ENST00000380097 PPM1AP35813 382 aa6.54□□□□□ -1.36
TRIM6-202ENST00000380097 METAP1P53582 386 aa6.54□□□□□ -1.36
TRIM6-202ENST00000380097 HIST1H2BDP58876 126 aa6.54□□□□□ -1.36
TRIM6-202ENST00000380097 CTXN1P60606 82 aa6.54□□□□□ -1.36
TRIM6-202ENST00000380097 PRPS1P60891 318 aa6.54□□□□□ -1.36
TRIM6-202ENST00000380097 LCN6P62502 163 aa6.54□□□□□ -1.36
TRIM6-202ENST00000380097 HIST1H2BCP62807 126 aa6.54□□□□□ -1.36
TRIM6-202ENST00000380097 HIST2H2BEQ16778 126 aa6.54□□□□□ -1.36
TRIM6-202ENST00000380097 AARDQ4LEZ3 155 aa6.54□□□□□ -1.36
TRIM6-202ENST00000380097 SLC22A6Q4U2R8 563 aa6.54□□□□□ -1.36
TRIM6-202ENST00000380097 WDR38Q5JTN6 314 aa6.54□□□□□ -1.36
TRIM6-202ENST00000380097 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.54□□□□□ -1.36
TRIM6-202ENST00000380097 THEM4Q5T1C6 240 aa6.54□□□□□ -1.36
TRIM6-202ENST00000380097 TPGS2Q68CL5 300 aa6.54□□□□□ -1.36
TRIM6-202ENST00000380097 ZNF547Q8IVP9 402 aa6.54□□□□□ -1.36
TRIM6-202ENST00000380097 CSNK1A1LQ8N752 337 aa6.54□□□□□ -1.36
TRIM6-202ENST00000380097 EXD3Q8N9H8 876 aa6.54□□□□□ -1.36
TRIM6-202ENST00000380097 OR10AD1Q8NGE0 317 aa6.54□□□□□ -1.36
TRIM6-202ENST00000380097 SUSD6Q92537 303 aa6.54□□□□□ -1.36
TRIM6-202ENST00000380097 HIST1H2BHQ93079 126 aa6.54□□□□□ -1.36
TRIM6-202ENST00000380097 NOL4LQ96MY1 436 aaPredicted RBP6.54□□□□□ -1.36
TRIM6-202ENST00000380097 ZNF681Q96N22 645 aa6.54□□□□□ -1.36
TRIM6-202ENST00000380097 HIST1H2BNQ99877 126 aa6.54□□□□□ -1.36
TRIM6-202ENST00000380097 HIST1H2BMQ99879 126 aa6.54□□□□□ -1.36
TRIM6-202ENST00000380097 NUDT9Q9BW91 350 aa6.54□□□□□ -1.36
TRIM6-202ENST00000380097 WDR76Q9H967 626 aa6.54□□□□□ -1.36
TRIM6-202ENST00000380097 TAS2R4Q9NYW5 299 aa6.54□□□□□ -1.36
TRIM6-202ENST00000380097 FLRT3Q9NZU0 649 aa6.54□□□□□ -1.36
TRIM6-202ENST00000380097 GRHPRQ9UBQ7 328 aa6.54□□□□□ -1.36
TRIM6-202ENST00000380097 CES1P1Q9UKY3 287 aa6.54□□□□□ -1.36
TRIM6-202ENST00000380097 SLC22A13Q9Y226 551 aa6.54□□□□□ -1.36
TRIM6-202ENST00000380097 ZBTB32Q9Y2Y4 487 aaPredicted RBP6.54□□□□□ -1.36
TRIM6-202ENST00000380097 STARD10Q9Y365 291 aa6.54□□□□□ -1.36
TRIM6-202ENST00000380097 TMED3Q9Y3Q3 217 aa6.54□□□□□ -1.36
TRIM6-202ENST00000380097 FLVCR1Q9Y5Y0 555 aa6.54□□□□□ -1.36
TRIM6-202ENST00000380097 ARPC3O15145 178 aa6.54□□□□□ -1.36
TRIM6-202ENST00000380097 LYPD3O95274 346 aa6.54□□□□□ -1.36
TRIM6-202ENST00000380097 RENP00797 406 aa6.54□□□□□ -1.36
TRIM6-202ENST00000380097 NGFRP08138 427 aa6.54□□□□□ -1.36
TRIM6-202ENST00000380097 CDKN2AP42771 156 aaKnown RBP6.54□□□□□ -1.36
TRIM6-202ENST00000380097 OR3A2P47893 321 aa6.54□□□□□ -1.36
TRIM6-202ENST00000380097 TNFRSF9Q07011 255 aa6.54□□□□□ -1.36
TRIM6-202ENST00000380097 MESTQ5EB52 335 aa6.54□□□□□ -1.36
TRIM6-202ENST00000380097 TMEM225Q6GV28 225 aa6.54□□□□□ -1.36
TRIM6-202ENST00000380097 ZNF343Q6P1L6 599 aa6.54□□□□□ -1.36
TRIM6-202ENST00000380097 SLC35D2Q76EJ3 337 aa6.54□□□□□ -1.36
TRIM6-202ENST00000380097 HIST3H2BBQ8N257 126 aa6.54□□□□□ -1.36
TRIM6-202ENST00000380097 CDRT4Q8N9R6 151 aa6.54□□□□□ -1.36
TRIM6-202ENST00000380097 VN1R2Q8NFZ6 395 aa6.54□□□□□ -1.36
TRIM6-202ENST00000380097 GPBAR1Q8TDU6 330 aa6.54□□□□□ -1.36
TRIM6-202ENST00000380097 MCHR2Q969V1 340 aa6.54□□□□□ -1.36
TRIM6-202ENST00000380097 CMBLQ96DG6 245 aa6.54□□□□□ -1.36
TRIM6-202ENST00000380097 GALNT14Q96FL9 552 aa6.54□□□□□ -1.36
TRIM6-202ENST00000380097 C4orf45Q96LM5 186 aa6.54□□□□□ -1.36
TRIM6-202ENST00000380097 CYP8B1Q9UNU6 501 aa6.54□□□□□ -1.36
TRIM6-202ENST00000380097 GPR34Q9UPC5 381 aa6.54□□□□□ -1.36
TRIM6-202ENST00000380097 SPTBP11277 2137 aa6.54□□□□□ -1.36
TRIM6-202ENST00000380097 MED19A0JLT2 244 aaPredicted RBP6.53□□□□□ -1.36
TRIM6-202ENST00000380097 FAM157AC9JC47 383 aa6.53□□□□□ -1.36
TRIM6-202ENST00000380097 LATO43561 262 aa6.53□□□□□ -1.36
TRIM6-202ENST00000380097 IL2RGP31785 369 aa6.53□□□□□ -1.36
TRIM6-202ENST00000380097 TMEM33P57088 247 aa6.53□□□□□ -1.36
TRIM6-202ENST00000380097 MESP2Q0VG99 397 aa6.53□□□□□ -1.36
TRIM6-202ENST00000380097 SQSTM1Q13501 440 aa6.53□□□□□ -1.36
TRIM6-202ENST00000380097 GPR18Q14330 331 aa6.53□□□□□ -1.36
TRIM6-202ENST00000380097 ZNHIT3Q15649 155 aaPredicted RBP6.53□□□□□ -1.36
TRIM6-202ENST00000380097 FAM189A2Q15884 450 aa6.53□□□□□ -1.36
TRIM6-202ENST00000380097 MEP1BQ16820 701 aa6.53□□□□□ -1.36
TRIM6-202ENST00000380097 IAH1Q2TAA2 248 aaPredicted RBP6.53□□□□□ -1.36
TRIM6-202ENST00000380097 PSRC1Q6PGN9 363 aaPredicted RBP6.53□□□□□ -1.36
TRIM6-202ENST00000380097 CLEC18BQ6UXF7 455 aa6.53□□□□□ -1.36
TRIM6-202ENST00000380097 ZNF574Q6ZN55 896 aaPredicted RBP6.53□□□□□ -1.36
TRIM6-202ENST00000380097 LRRC69Q6ZNQ3 347 aa6.53□□□□□ -1.36
TRIM6-202ENST00000380097 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.53□□□□□ -1.36
TRIM6-202ENST00000380097 SFTPA1Q8IWL2 248 aa6.53□□□□□ -1.36
TRIM6-202ENST00000380097 FAM213BQ8TBF2 198 aa6.53□□□□□ -1.36
TRIM6-202ENST00000380097 ZCCHC10Q8TBK6 192 aa6.53□□□□□ -1.36
TRIM6-202ENST00000380097 M1APQ8TC57 530 aa6.53□□□□□ -1.36
TRIM6-202ENST00000380097 SPPL3Q8TCT6 385 aa6.53□□□□□ -1.36
TRIM6-202ENST00000380097 RPS4Y2Q8TD47 263 aa6.53□□□□□ -1.36
TRIM6-202ENST00000380097 RNF128Q8TEB7 428 aa6.53□□□□□ -1.36
TRIM6-202ENST00000380097 RSC1A1Q92681 617 aa6.53□□□□□ -1.36
TRIM6-202ENST00000380097 NDUFAF3Q9BU61 184 aa6.53□□□□□ -1.36
TRIM6-202ENST00000380097 C19orf12Q9NSK7 152 aa6.53□□□□□ -1.36
TRIM6-202ENST00000380097 HDGFL3Q9Y3E1 203 aa6.53□□□□□ -1.36
TRIM6-202ENST00000380097 MMACHCQ9Y4U1 282 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms