RNA–Protein interactions for RNA: ENST00000379018.7

PDLIM4-202, Transcript of PDZ and LIM domain 4, humanhuman

TSL 1 (best) BASIC

Gene PDLIM4, Length 1,006 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-202ENST00000379018 CDKN2AP42771 156 aaKnown RBP14.67□□□□□ -0.06
PDLIM4-202ENST00000379018 FAM189A2Q15884 450 aa14.67□□□□□ -0.06
PDLIM4-202ENST00000379018 GPR139Q6DWJ6 353 aa14.67□□□□□ -0.06
PDLIM4-202ENST00000379018 ZNF826PQ6ZT77 177 aa14.67□□□□□ -0.06
PDLIM4-202ENST00000379018 FKBP9P1Q75LS8 142 aa14.67□□□□□ -0.06
PDLIM4-202ENST00000379018 PIP4P2Q8N4L2 257 aa14.67□□□□□ -0.06
PDLIM4-202ENST00000379018 C11orf44Q8N8P7 122 aa14.67□□□□□ -0.06
PDLIM4-202ENST00000379018 SIRT7Q9NRC8 400 aa14.67□□□□□ -0.06
PDLIM4-202ENST00000379018 INTS9Q9NV88 658 aaKnown RBP14.67□□□□□ -0.06
PDLIM4-202ENST00000379018 TRAV38-1A0A0B4J264 116 aa14.66□□□□□ -0.06
PDLIM4-202ENST00000379018 ANKRD61A6NGH8 418 aa14.66□□□□□ -0.06
PDLIM4-202ENST00000379018 PIN1P1O15428 100 aa14.66□□□□□ -0.06
PDLIM4-202ENST00000379018 GRPP07492 148 aa14.66□□□□□ -0.06
PDLIM4-202ENST00000379018 GGT2P36268 569 aa14.66□□□□□ -0.06
PDLIM4-202ENST00000379018 DLX1P56177 255 aa14.66□□□□□ -0.06
PDLIM4-202ENST00000379018 COX10Q12887 443 aa14.66□□□□□ -0.06
PDLIM4-202ENST00000379018 RSPO1Q2MKA7 263 aaPredicted RBP14.66□□□□□ -0.06
PDLIM4-202ENST00000379018 TMPRSS11FQ6ZWK6 438 aa14.66□□□□□ -0.06
PDLIM4-202ENST00000379018 ADCK1Q86TW2 530 aa14.66□□□□□ -0.06
PDLIM4-202ENST00000379018 FAM156AQ8NDB6 213 aa14.66□□□□□ -0.06
PDLIM4-202ENST00000379018 RSRC1Q96IZ7 334 aaKnown RBP14.66□□□□□ -0.06
PDLIM4-202ENST00000379018 ATF6BQ99941 703 aa14.66□□□□□ -0.06
PDLIM4-202ENST00000379018 SRA1Q9HD15 236 aaKnown RBP14.66□□□□□ -0.06
PDLIM4-202ENST00000379018 TMEM5Q9Y2B1 443 aa14.66□□□□□ -0.06
PDLIM4-202ENST00000379018 PLXNB1O43157 2135 aa14.65□□□□□ -0.06
PDLIM4-202ENST00000379018 A0A1B0GW55 424 aa14.65□□□□□ -0.06
PDLIM4-202ENST00000379018 A0A1B0GWJ7 208 aa14.65□□□□□ -0.06
PDLIM4-202ENST00000379018 GGT3PA6NGU5 568 aa14.65□□□□□ -0.06
PDLIM4-202ENST00000379018 FCN3O75636 299 aa14.65□□□□□ -0.06
PDLIM4-202ENST00000379018 PPP1R3DO95685 299 aa14.65□□□□□ -0.06
PDLIM4-202ENST00000379018 HLA-DQA2P01906 255 aa14.65□□□□□ -0.06
PDLIM4-202ENST00000379018 DUX4L2P0CJ85 424 aa14.65□□□□□ -0.06
PDLIM4-202ENST00000379018 DUX4L3P0CJ86 424 aa14.65□□□□□ -0.06
PDLIM4-202ENST00000379018 DUX4L4P0CJ87 422 aa14.65□□□□□ -0.06
PDLIM4-202ENST00000379018 DUX4L5P0CJ88 424 aa14.65□□□□□ -0.06
PDLIM4-202ENST00000379018 DUX4L6P0CJ89 424 aa14.65□□□□□ -0.06
PDLIM4-202ENST00000379018 DUX4L7P0CJ90 424 aa14.65□□□□□ -0.06
PDLIM4-202ENST00000379018 CRABP1P29762 137 aa14.65□□□□□ -0.06
PDLIM4-202ENST00000379018 MDH1P40925 334 aaKnown RBP14.65□□□□□ -0.06
PDLIM4-202ENST00000379018 HIST1H3AP68431 136 aa14.65□□□□□ -0.06
PDLIM4-202ENST00000379018 ELF3P78545 371 aaPredicted RBP14.65□□□□□ -0.06
PDLIM4-202ENST00000379018 TRAP1Q12931 704 aaKnown RBP14.65□□□□□ -0.06
PDLIM4-202ENST00000379018 KCNMB1Q16558 191 aa14.65□□□□□ -0.06
PDLIM4-202ENST00000379018 BEAN1Q3B7T3 259 aa14.65□□□□□ -0.06
PDLIM4-202ENST00000379018 IFI44LQ53G44 452 aa14.65□□□□□ -0.06
PDLIM4-202ENST00000379018 FGD3Q5JSP0 725 aa14.65□□□□□ -0.06
PDLIM4-202ENST00000379018 HIST2H3PS2Q5TEC6 136 aa14.65□□□□□ -0.06
PDLIM4-202ENST00000379018 PGM2L1Q6PCE3 622 aa14.65□□□□□ -0.06
PDLIM4-202ENST00000379018 DNM1P34Q6PK57 102 aa14.65□□□□□ -0.06
PDLIM4-202ENST00000379018 DUX4L9Q6RFH8 374 aaPredicted RBP14.65□□□□□ -0.06
PDLIM4-202ENST00000379018 COLCA1Q6ZS62 124 aa14.65□□□□□ -0.06
PDLIM4-202ENST00000379018 HIST2H3AQ71DI3 136 aa14.65□□□□□ -0.06
PDLIM4-202ENST00000379018 FAM90A1Q86YD7 464 aa14.65□□□□□ -0.06
PDLIM4-202ENST00000379018 OR2AJ1Q8NGZ0 328 aa14.65□□□□□ -0.06
PDLIM4-202ENST00000379018 OR2AE1Q8NHA4 323 aa14.65□□□□□ -0.06
PDLIM4-202ENST00000379018 HSH2DQ96JZ2 352 aa14.65□□□□□ -0.06
PDLIM4-202ENST00000379018 C16orf95Q9H693 158 aa14.65□□□□□ -0.06
PDLIM4-202ENST00000379018 NRIP3Q9NQ35 241 aa14.65□□□□□ -0.06
PDLIM4-202ENST00000379018 DUX4Q9UBX2 424 aa14.65□□□□□ -0.06
PDLIM4-202ENST00000379018 VPREB3Q9UKI3 123 aa14.65□□□□□ -0.06
PDLIM4-202ENST00000379018 SIGLEC7Q9Y286 467 aa14.65□□□□□ -0.06
PDLIM4-202ENST00000379018 N6AMT1Q9Y5N5 214 aa14.65□□□□□ -0.06
PDLIM4-202ENST00000379018 LOC100653049A0A140TA62 436 aa14.64□□□□□ -0.07
PDLIM4-202ENST00000379018 C5orf63A6NC05 138 aa14.64□□□□□ -0.07
PDLIM4-202ENST00000379018 CD300LBA8K4G0 201 aa14.64□□□□□ -0.07
PDLIM4-202ENST00000379018 KRT34O76011 436 aa14.64□□□□□ -0.07
PDLIM4-202ENST00000379018 FBP1P09467 338 aa14.64□□□□□ -0.07
PDLIM4-202ENST00000379018 RPS6KA3P51812 740 aa14.64□□□□□ -0.07
PDLIM4-202ENST00000379018 KLRD1Q13241 179 aa14.64□□□□□ -0.07
PDLIM4-202ENST00000379018 Q6ZPA2 131 aa14.64□□□□□ -0.07
PDLIM4-202ENST00000379018 STON2Q8WXE9 905 aa14.64□□□□□ -0.07
PDLIM4-202ENST00000379018 ATP6V1G3Q96LB4 118 aa14.64□□□□□ -0.07
PDLIM4-202ENST00000379018 NSRP1Q9H0G5 558 aaKnown RBP14.64□□□□□ -0.07
PDLIM4-202ENST00000379018 PPA2Q9H2U2 334 aa14.64□□□□□ -0.07
PDLIM4-202ENST00000379018 FN3KQ9H479 309 aa14.64□□□□□ -0.07
PDLIM4-202ENST00000379018 CNTD2Q9H8S5 307 aa14.64□□□□□ -0.07
PDLIM4-202ENST00000379018 TRIM36Q9NQ86 728 aa14.64□□□□□ -0.07
PDLIM4-202ENST00000379018 ZNRD1Q9P1U0 126 aa14.64□□□□□ -0.07
PDLIM4-202ENST00000379018 RPUSD1Q9UJJ7 312 aaKnown RBP14.64□□□□□ -0.07
PDLIM4-202ENST00000379018 AURKCQ9UQB9 309 aa14.64□□□□□ -0.07
PDLIM4-202ENST00000379018 SIGLEC9Q9Y336 463 aa14.64□□□□□ -0.07
PDLIM4-202ENST00000379018 GSTA4O15217 222 aa14.63□□□□□ -0.07
PDLIM4-202ENST00000379018 PTP4A3O75365 173 aa14.63□□□□□ -0.07
PDLIM4-202ENST00000379018 PAHP00439 452 aa14.63□□□□□ -0.07
PDLIM4-202ENST00000379018 SNAI3Q3KNW1 292 aa14.63□□□□□ -0.07
PDLIM4-202ENST00000379018 CDONQ4KMG0 1287 aa14.63□□□□□ -0.07
PDLIM4-202ENST00000379018 SLC18B1Q6NT16 456 aa14.63□□□□□ -0.07
PDLIM4-202ENST00000379018 Q6ZTK2 550 aa14.63□□□□□ -0.07
PDLIM4-202ENST00000379018 CYP4Z1Q86W10 505 aa14.63□□□□□ -0.07
PDLIM4-202ENST00000379018 PNKDQ8N490 385 aa14.63□□□□□ -0.07
PDLIM4-202ENST00000379018 SLC7A13Q8TCU3 470 aa14.63□□□□□ -0.07
PDLIM4-202ENST00000379018 ERMAPQ96PL5 475 aaPredicted RBP14.63□□□□□ -0.07
PDLIM4-202ENST00000379018 NMNAT3Q96T66 252 aa14.63□□□□□ -0.07
PDLIM4-202ENST00000379018 CCL13Q99616 98 aa14.63□□□□□ -0.07
PDLIM4-202ENST00000379018 TOR3AQ9H497 397 aa14.63□□□□□ -0.07
PDLIM4-202ENST00000379018 RPRD1BQ9NQG5 326 aaKnown RBP14.63□□□□□ -0.07
PDLIM4-202ENST00000379018 GID8Q9NWU2 228 aa14.63□□□□□ -0.07
PDLIM4-202ENST00000379018 B9D1Q9UPM9 204 aa14.63□□□□□ -0.07
PDLIM4-202ENST00000379018 CAB39Q9Y376 341 aaPredicted RBP14.63□□□□□ -0.07
PDLIM4-202ENST00000379018 NOP16Q9Y3C1 178 aaKnown RBP14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms