RNA–Protein interactions for RNA: ENST00000377861.4

PCDH9-201, Transcript of protocadherin 9, humanhuman

TSL 1 (best) BASIC

Gene PCDH9, Length 28,227 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-201ENST00000377861 SOX21Q9Y651 276 aaPredicted RBP4.45□□□□□ -1.7
PCDH9-201ENST00000377861 SCN11AQ9UI33 1791 aa4.45□□□□□ -1.7
PCDH9-201ENST00000377861 CD8B2A6NJW9 211 aa4.45□□□□□ -1.7
PCDH9-201ENST00000377861 GOSR2O14653 212 aa4.45□□□□□ -1.7
PCDH9-201ENST00000377861 FCMRO60667 390 aa4.45□□□□□ -1.7
PCDH9-201ENST00000377861 ORM1P02763 201 aa4.45□□□□□ -1.7
PCDH9-201ENST00000377861 CRISPLD2Q9H0B8 497 aa4.45□□□□□ -1.7
PCDH9-201ENST00000377861 GPR37O15354 613 aa4.45□□□□□ -1.7
PCDH9-201ENST00000377861 NKAIN2Q5VXU1 208 aa4.45□□□□□ -1.7
PCDH9-201ENST00000377861 MAML2Q8IZL2 1156 aaPredicted RBP4.45□□□□□ -1.7
PCDH9-201ENST00000377861 SPEM1Q8N4L4 309 aa4.45□□□□□ -1.7
PCDH9-201ENST00000377861 RTN4IP1Q8WWV3 396 aaPredicted RBP4.45□□□□□ -1.7
PCDH9-201ENST00000377861 NUP188Q5SRE5 1749 aa4.45□□□□□ -1.7
PCDH9-201ENST00000377861 SEC13P55735 322 aa4.45□□□□□ -1.7
PCDH9-201ENST00000377861 ZNF740Q8NDX6 193 aa4.45□□□□□ -1.7
PCDH9-201ENST00000377861 CMBLQ96DG6 245 aa4.45□□□□□ -1.7
PCDH9-201ENST00000377861 A0A0G2JN53 185 aa4.45□□□□□ -1.7
PCDH9-201ENST00000377861 MPC2O95563 127 aa4.45□□□□□ -1.7
PCDH9-201ENST00000377861 CXCL12P48061 93 aa4.45□□□□□ -1.7
PCDH9-201ENST00000377861 OR2G6Q5TZ20 316 aa4.45□□□□□ -1.7
PCDH9-201ENST00000377861 TSEN54Q7Z6J9 526 aaKnown RBP4.45□□□□□ -1.7
PCDH9-201ENST00000377861 ALKBH3Q96Q83 286 aaPredicted RBP4.45□□□□□ -1.7
PCDH9-201ENST00000377861 RNF122Q9H9V4 155 aa4.45□□□□□ -1.7
PCDH9-201ENST00000377861 ADGRL4Q9HBW9 690 aa4.45□□□□□ -1.7
PCDH9-201ENST00000377861 MMP17Q9ULZ9 603 aa4.45□□□□□ -1.7
PCDH9-201ENST00000377861 AP4M1O00189 453 aa4.45□□□□□ -1.7
PCDH9-201ENST00000377861 NUBP1P53384 320 aa4.45□□□□□ -1.7
PCDH9-201ENST00000377861 PAAF1Q9BRP4 392 aa4.45□□□□□ -1.7
PCDH9-201ENST00000377861 MRPS28Q9Y2Q9 187 aaKnown RBP4.45□□□□□ -1.7
PCDH9-201ENST00000377861 MRPL42Q9Y6G3 142 aaKnown RBP4.45□□□□□ -1.7
PCDH9-201ENST00000377861 ANKRD34CP0C6C1 535 aa4.45□□□□□ -1.7
PCDH9-201ENST00000377861 ERVK-25P63136 954 aa4.45□□□□□ -1.7
PCDH9-201ENST00000377861 MOGAT2Q3SYC2 334 aa4.45□□□□□ -1.7
PCDH9-201ENST00000377861 TMEM70Q9BUB7 260 aa4.45□□□□□ -1.7
PCDH9-201ENST00000377861 CTAG2O75638 210 aa4.45□□□□□ -1.7
PCDH9-201ENST00000377861 CD46P15529 392 aa4.45□□□□□ -1.7
PCDH9-201ENST00000377861 SP7Q8TDD2 431 aaPredicted RBP4.44□□□□□ -1.7
PCDH9-201ENST00000377861 SFRP2Q96HF1 295 aa4.44□□□□□ -1.7
PCDH9-201ENST00000377861 CRHP06850 196 aa4.44□□□□□ -1.7
PCDH9-201ENST00000377861 SRP9P49458 86 aaKnown RBP4.44□□□□□ -1.7
PCDH9-201ENST00000377861 NLRC3Q7RTR2 1065 aa4.44□□□□□ -1.7
PCDH9-201ENST00000377861 FAM89BQ8N5H3 189 aa4.44□□□□□ -1.7
PCDH9-201ENST00000377861 LGALS14Q8TCE9 139 aa4.44□□□□□ -1.7
PCDH9-201ENST00000377861 TCRBV21S2A2A0A5A6 115 aa4.44□□□□□ -1.7
PCDH9-201ENST00000377861 C9JVG2 144 aa4.44□□□□□ -1.7
PCDH9-201ENST00000377861 PPP1R3DO95685 299 aa4.44□□□□□ -1.7
PCDH9-201ENST00000377861 OR52R1Q8NGF1 315 aa4.44□□□□□ -1.7
PCDH9-201ENST00000377861 LSM10Q969L4 123 aaKnown RBP4.44□□□□□ -1.7
PCDH9-201ENST00000377861 TAAR9Q96RI9 348 aa4.44□□□□□ -1.7
PCDH9-201ENST00000377861 GPR52Q9Y2T5 361 aa4.44□□□□□ -1.7
PCDH9-201ENST00000377861 J3QRE1 110 aa4.44□□□□□ -1.7
PCDH9-201ENST00000377861 TOXO94900 526 aa4.44□□□□□ -1.7
PCDH9-201ENST00000377861 CD160O95971 181 aa4.44□□□□□ -1.7
PCDH9-201ENST00000377861 CTGFP29279 349 aa4.44□□□□□ -1.7
PCDH9-201ENST00000377861 CPEB2Q7Z5Q1 589 aaKnown RBP4.44□□□□□ -1.7
PCDH9-201ENST00000377861 MUCL1Q96DR8 90 aa4.44□□□□□ -1.7
PCDH9-201ENST00000377861 SLC35D1Q9NTN3 355 aa4.44□□□□□ -1.7
PCDH9-201ENST00000377861 CHST14Q8NCH0 376 aa4.44□□□□□ -1.7
PCDH9-201ENST00000377861 DVL2O14641 736 aa4.44□□□□□ -1.7
PCDH9-201ENST00000377861 CYTIPO60759 359 aa4.44□□□□□ -1.7
PCDH9-201ENST00000377861 MPLP40238 635 aa4.44□□□□□ -1.7
PCDH9-201ENST00000377861 EXOSC2Q13868 293 aaKnown RBP4.44□□□□□ -1.7
PCDH9-201ENST00000377861 FAM78AQ5JUQ0 283 aa4.44□□□□□ -1.7
PCDH9-201ENST00000377861 HOGA1Q86XE5 327 aa4.44□□□□□ -1.7
PCDH9-201ENST00000377861 ZNF808Q8N4W9 903 aaPredicted RBP4.44□□□□□ -1.7
PCDH9-201ENST00000377861 SFT2D2O95562 160 aa4.44□□□□□ -1.7
PCDH9-201ENST00000377861 CER1O95813 267 aa4.44□□□□□ -1.7
PCDH9-201ENST00000377861 NRASP01111 189 aa4.44□□□□□ -1.7
PCDH9-201ENST00000377861 FBXW12Q6X9E4 464 aa4.44□□□□□ -1.7
PCDH9-201ENST00000377861 OCIAD1Q9NX40 245 aa4.44□□□□□ -1.7
PCDH9-201ENST00000377861 SIGLEC1Q9BZZ2 1709 aa4.44□□□□□ -1.7
PCDH9-201ENST00000377861 ADAM11O75078 769 aa4.44□□□□□ -1.7
PCDH9-201ENST00000377861 BCKDHBP21953 392 aa4.44□□□□□ -1.7
PCDH9-201ENST00000377861 BCORP1Q8N888 145 aa4.44□□□□□ -1.7
PCDH9-201ENST00000377861 APOBEC4Q8WW27 367 aaKnown RBP4.44□□□□□ -1.7
PCDH9-201ENST00000377861 SMIM8Q96KF7 97 aa4.44□□□□□ -1.7
PCDH9-201ENST00000377861 RPS10P5Q9NQ39 176 aa4.44□□□□□ -1.7
PCDH9-201ENST00000377861 ZBTB25P24278 435 aa4.44□□□□□ -1.7
PCDH9-201ENST00000377861 IQCF1Q8N6M8 205 aa4.44□□□□□ -1.7
PCDH9-201ENST00000377861 LEXMQ3ZCV2 418 aa4.44□□□□□ -1.7
PCDH9-201ENST00000377861 DCAF12Q5T6F0 453 aa4.44□□□□□ -1.7
PCDH9-201ENST00000377861 TTC9BQ8N6N2 239 aa4.44□□□□□ -1.7
PCDH9-201ENST00000377861 ZNF816-ZNF321PA0A0X1KG74 233 aa4.44□□□□□ -1.7
PCDH9-201ENST00000377861 CCL14Q16627 93 aa4.44□□□□□ -1.7
PCDH9-201ENST00000377861 C20orf196Q8IYI0 205 aa4.44□□□□□ -1.7
PCDH9-201ENST00000377861 MRPS34P82930 218 aaKnown RBP4.44□□□□□ -1.7
PCDH9-201ENST00000377861 ZNF117Q03924 483 aa4.44□□□□□ -1.7
PCDH9-201ENST00000377861 SLC14A1Q13336 389 aa4.44□□□□□ -1.7
PCDH9-201ENST00000377861 ERASQ7Z444 233 aa4.44□□□□□ -1.7
PCDH9-201ENST00000377861 TMEM178AQ8NBL3 297 aa4.44□□□□□ -1.7
PCDH9-201ENST00000377861 PRICKLE3O43900 615 aaPredicted RBP4.44□□□□□ -1.7
PCDH9-201ENST00000377861 SRP14P37108 136 aaKnown RBP4.44□□□□□ -1.7
PCDH9-201ENST00000377861 GRHL3Q8TE85 626 aa4.44□□□□□ -1.7
PCDH9-201ENST00000377861 TMEM30AQ9NV96 361 aa4.44□□□□□ -1.7
PCDH9-201ENST00000377861 ITGB8P26012 769 aa4.44□□□□□ -1.7
PCDH9-201ENST00000377861 AGFG1P52594 562 aaKnown RBP4.44□□□□□ -1.7
PCDH9-201ENST00000377861 PRRT3Q5FWE3 981 aa4.44□□□□□ -1.7
PCDH9-201ENST00000377861 SLC25A53Q5H9E4 307 aa4.44□□□□□ -1.7
PCDH9-201ENST00000377861 C6orf132Q5T0Z8 1188 aa4.44□□□□□ -1.7
PCDH9-201ENST00000377861 OR5M10Q6IEU7 315 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms