RNA–Protein interactions for RNA: ENST00000374730.2

USP48-202, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-202ENST00000374730 OR8G3PP0DMU2 310 aa4.23□□□□□ -1.73
USP48-202ENST00000374730 FOLR1P15328 257 aa4.23□□□□□ -1.73
USP48-202ENST00000374730 SRMP19623 302 aa4.23□□□□□ -1.73
USP48-202ENST00000374730 ALOX5APP20292 161 aa4.23□□□□□ -1.73
USP48-202ENST00000374730 BCKDHBP21953 392 aa4.23□□□□□ -1.73
USP48-202ENST00000374730 CXCR1P25024 350 aa4.23□□□□□ -1.73
USP48-202ENST00000374730 DPP4P27487 766 aa4.23□□□□□ -1.73
USP48-202ENST00000374730 EVI2BP34910 448 aa4.23□□□□□ -1.73
USP48-202ENST00000374730 P2RX1P51575 399 aa4.23□□□□□ -1.73
USP48-202ENST00000374730 NR0B1P51843 470 aaKnown RBP4.23□□□□□ -1.73
USP48-202ENST00000374730 POLR2HP52434 150 aaKnown RBP4.23□□□□□ -1.73
USP48-202ENST00000374730 SLC26A5P58743 744 aa4.23□□□□□ -1.73
USP48-202ENST00000374730 RPL27P61353 136 aaKnown RBP4.23□□□□□ -1.73
USP48-202ENST00000374730 RASGEF1BQ0VAM2 473 aa4.23□□□□□ -1.73
USP48-202ENST00000374730 MAB21L1Q13394 359 aa4.23□□□□□ -1.73
USP48-202ENST00000374730 TNK1Q13470 666 aa4.23□□□□□ -1.73
USP48-202ENST00000374730 NSDHLQ15738 373 aa4.23□□□□□ -1.73
USP48-202ENST00000374730 FAM69AQ5T7M9 428 aa4.23□□□□□ -1.73
USP48-202ENST00000374730 LIPNQ5VXI9 398 aa4.23□□□□□ -1.73
USP48-202ENST00000374730 SLC22A10Q63ZE4 541 aa4.23□□□□□ -1.73
USP48-202ENST00000374730 OLFML2AQ68BL7 652 aa4.23□□□□□ -1.73
USP48-202ENST00000374730 RHBDD2Q6NTF9 364 aa4.23□□□□□ -1.73
USP48-202ENST00000374730 FAM199XQ6PEV8 388 aaPredicted RBP4.23□□□□□ -1.73
USP48-202ENST00000374730 TMEM88Q6PEY1 159 aa4.23□□□□□ -1.73
USP48-202ENST00000374730 C11orf88Q6PI97 169 aa4.23□□□□□ -1.73
USP48-202ENST00000374730 LRRN1Q6UXK5 716 aa4.23□□□□□ -1.73
USP48-202ENST00000374730 BTN2A1Q7KYR7 527 aa4.23□□□□□ -1.73
USP48-202ENST00000374730 COX15Q7KZN9 410 aa4.23□□□□□ -1.73
USP48-202ENST00000374730 HIST3H2AQ7L7L0 130 aa4.23□□□□□ -1.73
USP48-202ENST00000374730 GRINAQ7Z429 371 aa4.23□□□□□ -1.73
USP48-202ENST00000374730 RABEPKQ7Z6M1 372 aa4.23□□□□□ -1.73
USP48-202ENST00000374730 PRR22Q8IZ63 422 aa4.23□□□□□ -1.73
USP48-202ENST00000374730 OR6V1Q8N148 313 aa4.23□□□□□ -1.73
USP48-202ENST00000374730 GHDCQ8N2G8 530 aa4.23□□□□□ -1.73
USP48-202ENST00000374730 UBE2J2Q8N2K1 259 aa4.23□□□□□ -1.73
USP48-202ENST00000374730 TOMM5Q8N4H5 51 aa4.23□□□□□ -1.73
USP48-202ENST00000374730 DEFB119Q8N690 84 aa4.23□□□□□ -1.73
USP48-202ENST00000374730 YIPF7Q8N8F6 280 aa4.23□□□□□ -1.73
USP48-202ENST00000374730 OR4D9Q8NGE8 314 aa4.23□□□□□ -1.73
USP48-202ENST00000374730 OTOSQ8NHW6 89 aa4.23□□□□□ -1.73
USP48-202ENST00000374730 ZNF671Q8TAW3 534 aa4.23□□□□□ -1.73
USP48-202ENST00000374730 ZNF519Q8TB69 540 aa4.23□□□□□ -1.73
USP48-202ENST00000374730 C15orf40Q8WUR7 153 aa4.23□□□□□ -1.73
USP48-202ENST00000374730 RNF138Q8WVD3 245 aa4.23□□□□□ -1.73
USP48-202ENST00000374730 DEDD2Q8WXF8 326 aa4.23□□□□□ -1.73
USP48-202ENST00000374730 RAB40AQ8WXH6 277 aa4.23□□□□□ -1.73
USP48-202ENST00000374730 ASB17Q8WXJ9 295 aa4.23□□□□□ -1.73
USP48-202ENST00000374730 ST8SIA1Q92185 356 aa4.23□□□□□ -1.73
USP48-202ENST00000374730 HSD17B8Q92506 261 aa4.23□□□□□ -1.73
USP48-202ENST00000374730 HIST1H2ACQ93077 130 aa4.23□□□□□ -1.73
USP48-202ENST00000374730 CLDN23Q96B33 292 aa4.23□□□□□ -1.73
USP48-202ENST00000374730 ZNF524Q96C55 264 aa4.23□□□□□ -1.73
USP48-202ENST00000374730 ZNF501Q96CX3 271 aaPredicted RBP4.23□□□□□ -1.73
USP48-202ENST00000374730 SLC25A38Q96DW6 304 aa4.23□□□□□ -1.73
USP48-202ENST00000374730 SCMH1Q96GD3 660 aa4.23□□□□□ -1.73
USP48-202ENST00000374730 C4orf45Q96LM5 186 aa4.23□□□□□ -1.73
USP48-202ENST00000374730 ADAD1Q96M93 576 aaKnown RBP4.23□□□□□ -1.73
USP48-202ENST00000374730 OR2M2Q96R28 347 aa4.23□□□□□ -1.73
USP48-202ENST00000374730 OR8B4Q96RC9 309 aa4.23□□□□□ -1.73
USP48-202ENST00000374730 INTS14Q96SY0 518 aa4.23□□□□□ -1.73
USP48-202ENST00000374730 KLHDC3Q9BQ90 382 aa4.23□□□□□ -1.73
USP48-202ENST00000374730 GON7Q9BXV9 100 aa4.23□□□□□ -1.73
USP48-202ENST00000374730 TBL1XR1Q9BZK7 514 aa4.23□□□□□ -1.73
USP48-202ENST00000374730 RTN4RQ9BZR6 473 aa4.23□□□□□ -1.73
USP48-202ENST00000374730 ACTR6Q9GZN1 396 aa4.23□□□□□ -1.73
USP48-202ENST00000374730 VN1R1Q9GZP7 353 aa4.23□□□□□ -1.73
USP48-202ENST00000374730 PRO3102Q9H379 93 aa4.23□□□□□ -1.73
USP48-202ENST00000374730 AAMDCQ9H7C9 122 aa4.23□□□□□ -1.73
USP48-202ENST00000374730 MCUBQ9NWR8 336 aa4.23□□□□□ -1.73
USP48-202ENST00000374730 MRPL39Q9NYK5 338 aaKnown RBP4.23□□□□□ -1.73
USP48-202ENST00000374730 DHCR7Q9UBM7 475 aaKnown RBP4.23□□□□□ -1.73
USP48-202ENST00000374730 WNT16Q9UBV4 365 aa4.23□□□□□ -1.73
USP48-202ENST00000374730 ZNF346Q9UL40 294 aaKnown RBP4.23□□□□□ -1.73
USP48-202ENST00000374730 PPIEQ9UNP9 301 aaKnown RBP4.23□□□□□ -1.73
USP48-202ENST00000374730 RBMX2Q9Y388 322 aaKnown RBP4.23□□□□□ -1.73
USP48-202ENST00000374730 TMED7Q9Y3B3 224 aa4.23□□□□□ -1.73
USP48-202ENST00000374730 AK6Q9Y3D8 172 aaKnown RBP4.23□□□□□ -1.73
USP48-202ENST00000374730 V9GY05 133 aa4.23□□□□□ -1.73
USP48-202ENST00000374730 CACNA1CQ13936 2221 aa4.22□□□□□ -1.73
USP48-202ENST00000374730 KIAA1549Q9HCM3 1950 aa4.22□□□□□ -1.73
USP48-202ENST00000374730 IGLV1-36A0A0B4J1U3 117 aa4.22□□□□□ -1.73
USP48-202ENST00000374730 A0A0B4J203 849 aa4.22□□□□□ -1.73
USP48-202ENST00000374730 A0A1W2PPK0 400 aa4.22□□□□□ -1.73
USP48-202ENST00000374730 PRSS37A4D1T9 235 aa4.22□□□□□ -1.73
USP48-202ENST00000374730 GAGE12JA6NER3 117 aa4.22□□□□□ -1.73
USP48-202ENST00000374730 TRABD2BA6NFA1 517 aa4.22□□□□□ -1.73
USP48-202ENST00000374730 ANKUB1A6NFN9 424 aa4.22□□□□□ -1.73
USP48-202ENST00000374730 TVP23AA6NH52 213 aa4.22□□□□□ -1.73
USP48-202ENST00000374730 MBD3L5A6NJ08 208 aaPredicted RBP4.22□□□□□ -1.73
USP48-202ENST00000374730 C4orf47A7E2U8 309 aa4.22□□□□□ -1.73
USP48-202ENST00000374730 CENPBD1B2RD01 187 aa4.22□□□□□ -1.73
USP48-202ENST00000374730 IDSB3KWA1 339 aa4.22□□□□□ -1.73
USP48-202ENST00000374730 FTCDNL1E5RQL4 147 aa4.22□□□□□ -1.73
USP48-202ENST00000374730 H7C1C5 153 aa4.22□□□□□ -1.73
USP48-202ENST00000374730 DCTN6O00399 190 aa4.22□□□□□ -1.73
USP48-202ENST00000374730 XKRYO14609 159 aa4.22□□□□□ -1.73
USP48-202ENST00000374730 GPR171O14626 319 aa4.22□□□□□ -1.73
USP48-202ENST00000374730 OR2T1O43869 369 aa4.22□□□□□ -1.73
USP48-202ENST00000374730 PRKNO60260 465 aaPredicted RBP4.22□□□□□ -1.73
USP48-202ENST00000374730 PRAF2O60831 178 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms