RNA–Protein interactions for RNA: ENST00000372755.7

VCL-202, Transcript of vinculin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VCL, Length 6,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-202ENST00000372755 TRGV8A0A0C4DH27 118 aa10.45□□□□□ -0.74
VCL-202ENST00000372755 SOCS7O14512 581 aa10.45□□□□□ -0.74
VCL-202ENST00000372755 ST6GAL1P15907 406 aa10.45□□□□□ -0.74
VCL-202ENST00000372755 CDK5R1Q15078 307 aa10.45□□□□□ -0.74
VCL-202ENST00000372755 PNLIPRP3Q17RR3 467 aa10.45□□□□□ -0.74
VCL-202ENST00000372755 TIGD3Q6B0B8 471 aa10.45□□□□□ -0.74
VCL-202ENST00000372755 SMIM7Q9BQ49 75 aa10.45□□□□□ -0.74
VCL-202ENST00000372755 MFRPQ9BY79 579 aa10.45□□□□□ -0.74
VCL-202ENST00000372755 DLG5Q8TDM6 1919 aa10.45□□□□□ -0.74
VCL-202ENST00000372755 OR4E1P0C645 316 aa10.45□□□□□ -0.74
VCL-202ENST00000372755 OPRM1P35372 400 aa10.45□□□□□ -0.74
VCL-202ENST00000372755 SLC19A1P41440 591 aa10.45□□□□□ -0.74
VCL-202ENST00000372755 FUT6P51993 359 aa10.45□□□□□ -0.74
VCL-202ENST00000372755 SMAD4Q13485 552 aaKnown RBP10.45□□□□□ -0.74
VCL-202ENST00000372755 STAC2Q6ZMT1 411 aa10.45□□□□□ -0.74
VCL-202ENST00000372755 LYG2Q86SG7 212 aa10.45□□□□□ -0.74
VCL-202ENST00000372755 SIGLEC11Q96RL6 698 aa10.45□□□□□ -0.74
VCL-202ENST00000372755 NIT2Q9NQR4 276 aa10.45□□□□□ -0.74
VCL-202ENST00000372755 FBXO8Q9NRD0 319 aa10.45□□□□□ -0.74
VCL-202ENST00000372755 A0A1B0GUH1 482 aa10.45□□□□□ -0.74
VCL-202ENST00000372755 ZNF354AO60765 605 aaPredicted RBP10.45□□□□□ -0.74
VCL-202ENST00000372755 CBR3O75828 277 aa10.45□□□□□ -0.74
VCL-202ENST00000372755 AQP8O94778 261 aa10.45□□□□□ -0.74
VCL-202ENST00000372755 GLULP15104 373 aa10.45□□□□□ -0.74
VCL-202ENST00000372755 SUMO1P63165 101 aaKnown RBP10.45□□□□□ -0.74
VCL-202ENST00000372755 C17orf78Q8N4C9 275 aa10.45□□□□□ -0.74
VCL-202ENST00000372755 PELI1Q96FA3 418 aa10.45□□□□□ -0.74
VCL-202ENST00000372755 CMTM3Q96MX0 182 aa10.45□□□□□ -0.74
VCL-202ENST00000372755 TNFSF15O95150 251 aa10.45□□□□□ -0.74
VCL-202ENST00000372755 MYOGP15173 224 aa10.45□□□□□ -0.74
VCL-202ENST00000372755 HRH1P35367 487 aa10.45□□□□□ -0.74
VCL-202ENST00000372755 BTG2P78543 158 aa10.45□□□□□ -0.74
VCL-202ENST00000372755 OR2V1Q8NHB1 315 aa10.45□□□□□ -0.74
VCL-202ENST00000372755 SLC2A8Q9NY64 477 aa10.45□□□□□ -0.74
VCL-202ENST00000372755 TRGV10A0A0A0MS01 117 aa10.44□□□□□ -0.74
VCL-202ENST00000372755 DHHO43323 396 aa10.44□□□□□ -0.74
VCL-202ENST00000372755 PTTG1IPP53801 180 aa10.44□□□□□ -0.74
VCL-202ENST00000372755 FABP9Q0Z7S8 132 aa10.44□□□□□ -0.74
VCL-202ENST00000372755 ARHGEF39Q8N4T4 335 aa10.44□□□□□ -0.74
VCL-202ENST00000372755 OR5AP2Q8NGF4 316 aa10.44□□□□□ -0.74
VCL-202ENST00000372755 NUDCD2Q8WVJ2 157 aa10.44□□□□□ -0.74
VCL-202ENST00000372755 GALMQ96C23 342 aa10.44□□□□□ -0.74
VCL-202ENST00000372755 TCHHQ07283 1943 aa10.44□□□□□ -0.74
VCL-202ENST00000372755 POU2F2P09086 479 aa10.44□□□□□ -0.74
VCL-202ENST00000372755 LIMS3P0CW19 117 aa10.44□□□□□ -0.74
VCL-202ENST00000372755 LIMS4P0CW20 117 aa10.44□□□□□ -0.74
VCL-202ENST00000372755 GABRB1P18505 474 aa10.44□□□□□ -0.74
VCL-202ENST00000372755 RAB5AP20339 215 aa10.44□□□□□ -0.74
VCL-202ENST00000372755 RNF151Q2KHN1 245 aa10.44□□□□□ -0.74
VCL-202ENST00000372755 PDZD11Q5EBL8 140 aa10.44□□□□□ -0.74
VCL-202ENST00000372755 TTC9Q92623 222 aa10.44□□□□□ -0.74
VCL-202ENST00000372755 KISS1RQ969F8 398 aaPredicted RBP10.44□□□□□ -0.74
VCL-202ENST00000372755 ERGIC1Q969X5 290 aa10.44□□□□□ -0.74
VCL-202ENST00000372755 ST3GAL6Q9Y274 331 aa10.44□□□□□ -0.74
VCL-202ENST00000372755 CCDC88AQ3V6T2 1871 aa10.44□□□□□ -0.74
VCL-202ENST00000372755 RFPL4AA6NLU0 287 aa10.44□□□□□ -0.74
VCL-202ENST00000372755 RFPL4AL1F8VTS6 287 aa10.44□□□□□ -0.74
VCL-202ENST00000372755 CD37P11049 281 aa10.44□□□□□ -0.74
VCL-202ENST00000372755 ARNTP27540 789 aa10.44□□□□□ -0.74
VCL-202ENST00000372755 THBS4P35443 961 aa10.44□□□□□ -0.74
VCL-202ENST00000372755 PIGPP57054 158 aa10.44□□□□□ -0.74
VCL-202ENST00000372755 NCR3LG1Q68D85 454 aa10.44□□□□□ -0.74
VCL-202ENST00000372755 DTWD2Q8NBA8 298 aa10.44□□□□□ -0.74
VCL-202ENST00000372755 POM121L2Q96KW2 1035 aa10.44□□□□□ -0.74
VCL-202ENST00000372755 MED29Q9NX70 200 aa10.44□□□□□ -0.74
VCL-202ENST00000372755 GDF2Q9UK05 429 aaPredicted RBP10.44□□□□□ -0.74
VCL-202ENST00000372755 ANKUB1A6NFN9 424 aa10.44□□□□□ -0.74
VCL-202ENST00000372755 LRRC3CA6NJW4 275 aa10.44□□□□□ -0.74
VCL-202ENST00000372755 ZGLP1P0C6A0 271 aa10.44□□□□□ -0.74
VCL-202ENST00000372755 ATF1P18846 271 aa10.44□□□□□ -0.74
VCL-202ENST00000372755 FGF7P21781 194 aa10.44□□□□□ -0.74
VCL-202ENST00000372755 BSGP35613 385 aa10.44□□□□□ -0.74
VCL-202ENST00000372755 GP2P55259 537 aaKnown RBP10.44□□□□□ -0.74
VCL-202ENST00000372755 FAM53BQ14153 422 aa10.44□□□□□ -0.74
VCL-202ENST00000372755 VMA21Q3ZAQ7 101 aa10.44□□□□□ -0.74
VCL-202ENST00000372755 OR2A2Q6IF42 318 aa10.44□□□□□ -0.74
VCL-202ENST00000372755 SLC25A26Q70HW3 274 aa10.44□□□□□ -0.74
VCL-202ENST00000372755 ABI3BPQ7Z7G0 1075 aa10.44□□□□□ -0.74
VCL-202ENST00000372755 ZDHHC19Q8WVZ1 309 aaPredicted RBP10.44□□□□□ -0.74
VCL-202ENST00000372755 MOB3AQ96BX8 217 aa10.44□□□□□ -0.74
VCL-202ENST00000372755 CABLES2Q9BTV7 478 aa10.44□□□□□ -0.74
VCL-202ENST00000372755 MRPL22Q9NWU5 206 aaKnown RBP10.44□□□□□ -0.74
VCL-202ENST00000372755 MYH3P11055 1940 aa10.44□□□□□ -0.74
VCL-202ENST00000372755 FAM221AA4D161 298 aa10.44□□□□□ -0.74
VCL-202ENST00000372755 POM121BA6NF01 834 aa10.44□□□□□ -0.74
VCL-202ENST00000372755 LINC01387J3KSC0 135 aa10.44□□□□□ -0.74
VCL-202ENST00000372755 Q1RN00 199 aa10.44□□□□□ -0.74
VCL-202ENST00000372755 UBALD2Q8IYN6 164 aa10.44□□□□□ -0.74
VCL-202ENST00000372755 TDHQ8IZJ6 230 aa10.44□□□□□ -0.74
VCL-202ENST00000372755 TRIM77I1YAP6 450 aa10.43□□□□□ -0.74
VCL-202ENST00000372755 FUCA1P04066 466 aa10.43□□□□□ -0.74
VCL-202ENST00000372755 GLI4P10075 376 aa10.43□□□□□ -0.74
VCL-202ENST00000372755 SRFP11831 508 aa10.43□□□□□ -0.74
VCL-202ENST00000372755 HTRA4P83105 476 aaPredicted RBP10.43□□□□□ -0.74
VCL-202ENST00000372755 LRRC10Q5BKY1 277 aa10.43□□□□□ -0.74
VCL-202ENST00000372755 TMEM18Q96B42 140 aa10.43□□□□□ -0.74
VCL-202ENST00000372755 CXCL16Q9H2A7 254 aa10.43□□□□□ -0.74
VCL-202ENST00000372755 IGHV3-64DA0A0J9YX35 117 aa10.43□□□□□ -0.74
VCL-202ENST00000372755 HPP00738 406 aa10.43□□□□□ -0.74
VCL-202ENST00000372755 SLC25A4P12235 298 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms