RNA–Protein interactions for RNA: ENST00000370576.8

MCF2-203, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MCF2, Length 3,688 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-203ENST00000370576 PPP3CBP16298 524 aa3.4□□□□□ -1.87
MCF2-203ENST00000370576 NELFEP18615 380 aaKnown RBP3.4□□□□□ -1.87
MCF2-203ENST00000370576 CD38P28907 300 aa3.4□□□□□ -1.87
MCF2-203ENST00000370576 ERP29P30040 261 aaKnown RBP3.4□□□□□ -1.87
MCF2-203ENST00000370576 UGT2B10P36537 528 aa3.4□□□□□ -1.87
MCF2-203ENST00000370576 PMELP40967 661 aa3.4□□□□□ -1.87
MCF2-203ENST00000370576 PTGDSP41222 190 aa3.4□□□□□ -1.87
MCF2-203ENST00000370576 OMPP47874 163 aa3.4□□□□□ -1.87
MCF2-203ENST00000370576 NPBWR1P48145 328 aa3.4□□□□□ -1.87
MCF2-203ENST00000370576 PPOXP50336 477 aa3.4□□□□□ -1.87
MCF2-203ENST00000370576 FXYD6P3P58550 94 aa3.4□□□□□ -1.87
MCF2-203ENST00000370576 STXBP1P61764 594 aaKnown RBP3.4□□□□□ -1.87
MCF2-203ENST00000370576 ESRRGP62508 458 aa3.4□□□□□ -1.87
MCF2-203ENST00000370576 PRKCDQ05655 676 aa3.4□□□□□ -1.87
MCF2-203ENST00000370576 MICAQ29983 383 aa3.4□□□□□ -1.87
MCF2-203ENST00000370576 PLK5Q496M5 336 aa3.4□□□□□ -1.87
MCF2-203ENST00000370576 HACD4Q5VWC8 232 aa3.4□□□□□ -1.87
MCF2-203ENST00000370576 BICRALQ6AI39 1079 aa3.4□□□□□ -1.87
MCF2-203ENST00000370576 GLYATQ6IB77 296 aa3.4□□□□□ -1.87
MCF2-203ENST00000370576 C17orf107Q6ZR85 190 aa3.4□□□□□ -1.87
MCF2-203ENST00000370576 DNM1P46Q6ZS02 220 aa3.4□□□□□ -1.87
MCF2-203ENST00000370576 TMPRSS11FQ6ZWK6 438 aa3.4□□□□□ -1.87
MCF2-203ENST00000370576 ABHD13Q7L211 337 aa3.4□□□□□ -1.87
MCF2-203ENST00000370576 C16orf62Q7Z3J2 963 aa3.4□□□□□ -1.87
MCF2-203ENST00000370576 GCSAMQ8N6F7 178 aa3.4□□□□□ -1.87
MCF2-203ENST00000370576 SUMF1Q8NBK3 374 aa3.4□□□□□ -1.87
MCF2-203ENST00000370576 ZNF738Q8NE65 137 aa3.4□□□□□ -1.87
MCF2-203ENST00000370576 SLC37A2Q8TED4 501 aa3.4□□□□□ -1.87
MCF2-203ENST00000370576 SLC19A3Q9BZV2 496 aa3.4□□□□□ -1.87
MCF2-203ENST00000370576 DPY30Q9C005 99 aa3.4□□□□□ -1.87
MCF2-203ENST00000370576 CUTCQ9NTM9 273 aa3.4□□□□□ -1.87
MCF2-203ENST00000370576 CCDC167Q9P0B6 97 aa3.4□□□□□ -1.87
MCF2-203ENST00000370576 PITPNC1Q9UKF7 332 aa3.4□□□□□ -1.87
MCF2-203ENST00000370576 ENPP4Q9Y6X5 453 aa3.4□□□□□ -1.87
MCF2-203ENST00000370576 U3KQE9 123 aa3.4□□□□□ -1.87
MCF2-203ENST00000370576 SMIM31A0A1B0GVY4 71 aa3.4□□□□□ -1.87
MCF2-203ENST00000370576 HYKKA2RU49 373 aa3.4□□□□□ -1.87
MCF2-203ENST00000370576 CPED1A4D0V7 1026 aa3.4□□□□□ -1.87
MCF2-203ENST00000370576 B4DXG7 233 aa3.4□□□□□ -1.87
MCF2-203ENST00000370576 HCRTR1O43613 425 aa3.4□□□□□ -1.87
MCF2-203ENST00000370576 GLSO94925 669 aaPredicted RBP3.4□□□□□ -1.87
MCF2-203ENST00000370576 CD5P06127 495 aa3.4□□□□□ -1.87
MCF2-203ENST00000370576 CDK1P06493 297 aa3.4□□□□□ -1.87
MCF2-203ENST00000370576 IL3P08700 152 aa3.4□□□□□ -1.87
MCF2-203ENST00000370576 CST2P09228 141 aa3.4□□□□□ -1.87
MCF2-203ENST00000370576 SLC35G4P0C7Q5 338 aa3.4□□□□□ -1.87
MCF2-203ENST00000370576 CSRP1P21291 193 aaKnown RBP3.4□□□□□ -1.87
MCF2-203ENST00000370576 CRHBPP24387 322 aa3.4□□□□□ -1.87
MCF2-203ENST00000370576 ACVR1BP36896 505 aa3.4□□□□□ -1.87
MCF2-203ENST00000370576 DGKQP52824 942 aa3.4□□□□□ -1.87
MCF2-203ENST00000370576 RAP2BP61225 183 aa3.4□□□□□ -1.87
MCF2-203ENST00000370576 NUTF2P61970 127 aaKnown RBP3.4□□□□□ -1.87
MCF2-203ENST00000370576 C2orf80Q0P641 193 aa3.4□□□□□ -1.87
MCF2-203ENST00000370576 FLOT2Q14254 428 aa3.4□□□□□ -1.87
MCF2-203ENST00000370576 GANABQ14697 944 aaKnown RBP3.4□□□□□ -1.87
MCF2-203ENST00000370576 SF3A2Q15428 464 aaKnown RBP3.4□□□□□ -1.87
MCF2-203ENST00000370576 CR1LQ2VPA4 569 aa3.4□□□□□ -1.87
MCF2-203ENST00000370576 CPTPQ5TA50 214 aa3.4□□□□□ -1.87
MCF2-203ENST00000370576 FAM199XQ6PEV8 388 aaPredicted RBP3.4□□□□□ -1.87
MCF2-203ENST00000370576 ENPP6Q6UWR7 440 aa3.4□□□□□ -1.87
MCF2-203ENST00000370576 ENPP7Q6UWV6 458 aa3.4□□□□□ -1.87
MCF2-203ENST00000370576 Q6ZT83 130 aa3.4□□□□□ -1.87
MCF2-203ENST00000370576 NUFIP2Q7Z417 695 aaKnown RBP3.4□□□□□ -1.87
MCF2-203ENST00000370576 GKN2Q86XP6 184 aa3.4□□□□□ -1.87
MCF2-203ENST00000370576 OR2T12Q8NG77 320 aa3.4□□□□□ -1.87
MCF2-203ENST00000370576 OR5T2Q8NGG2 359 aa3.4□□□□□ -1.87
MCF2-203ENST00000370576 SLC38A5Q8WUX1 472 aa3.4□□□□□ -1.87
MCF2-203ENST00000370576 TRUB1Q8WWH5 349 aaKnown RBP3.4□□□□□ -1.87
MCF2-203ENST00000370576 WNT2BQ93097 391 aa3.4□□□□□ -1.87
MCF2-203ENST00000370576 ZNF75AQ96N20 296 aa3.4□□□□□ -1.87
MCF2-203ENST00000370576 MS4A4EQ96PG1 132 aa3.4□□□□□ -1.87
MCF2-203ENST00000370576 OR52E6Q96RD3 313 aa3.4□□□□□ -1.87
MCF2-203ENST00000370576 DPH7Q9BTV6 452 aa3.4□□□□□ -1.87
MCF2-203ENST00000370576 DYRK4Q9NR20 520 aa3.4□□□□□ -1.87
MCF2-203ENST00000370576 VPREB3Q9UKI3 123 aa3.4□□□□□ -1.87
MCF2-203ENST00000370576 RNF6Q9Y252 685 aa3.4□□□□□ -1.87
MCF2-203ENST00000370576 RAI1Q7Z5J4 1906 aaPredicted RBP3.39□□□□□ -1.87
MCF2-203ENST00000370576 ZNF860A6NHJ4 632 aa3.39□□□□□ -1.87
MCF2-203ENST00000370576 M0QZK8 103 aa3.39□□□□□ -1.87
MCF2-203ENST00000370576 MAGEB4O15481 346 aaPredicted RBP3.39□□□□□ -1.87
MCF2-203ENST00000370576 ZGLP1P0C6A0 271 aa3.39□□□□□ -1.87
MCF2-203ENST00000370576 PPIAL4GP0DN37 164 aa3.39□□□□□ -1.87
MCF2-203ENST00000370576 DAOP14920 347 aa3.39□□□□□ -1.87
MCF2-203ENST00000370576 S100A3P33764 101 aa3.39□□□□□ -1.87
MCF2-203ENST00000370576 GGT2P36268 569 aa3.39□□□□□ -1.87
MCF2-203ENST00000370576 PLA2G16P53816 162 aa3.39□□□□□ -1.87
MCF2-203ENST00000370576 HILS1P60008 231 aa3.39□□□□□ -1.87
MCF2-203ENST00000370576 VLDLRP98155 873 aa3.39□□□□□ -1.87
MCF2-203ENST00000370576 C16orf72Q14CZ0 275 aa3.39□□□□□ -1.87
MCF2-203ENST00000370576 ELOCQ15369 112 aa3.39□□□□□ -1.87
MCF2-203ENST00000370576 SYTL3Q4VX76 610 aa3.39□□□□□ -1.87
MCF2-203ENST00000370576 LRRC73Q5JTD7 316 aa3.39□□□□□ -1.87
MCF2-203ENST00000370576 NSUN5P2Q63ZY6 315 aa3.39□□□□□ -1.87
MCF2-203ENST00000370576 HIST2H2AA3Q6FI13 130 aa3.39□□□□□ -1.87
MCF2-203ENST00000370576 Q6ZNX1 250 aa3.39□□□□□ -1.87
MCF2-203ENST00000370576 RBM44Q6ZP01 1051 aaKnown RBP3.39□□□□□ -1.87
MCF2-203ENST00000370576 GDPD3Q7L5L3 318 aa3.39□□□□□ -1.87
MCF2-203ENST00000370576 SMIM15Q7Z3B0 74 aa3.39□□□□□ -1.87
MCF2-203ENST00000370576 RNF144BQ7Z419 303 aa3.39□□□□□ -1.87
MCF2-203ENST00000370576 STPG3Q8N7X2 389 aa3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms