RNA–Protein interactions for RNA: ENST00000366746.7

MRPL55-217, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPL55, Length 565 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-217ENST00000366746 CFAP77Q6ZQR2 320 aa13.84□□□□□ -0.19
MRPL55-217ENST00000366746 NAA40Q86UY6 237 aa13.84□□□□□ -0.19
MRPL55-217ENST00000366746 ERMAPQ96PL5 475 aaPredicted RBP13.84□□□□□ -0.19
MRPL55-217ENST00000366746 RASSF4Q9H2L5 321 aa13.84□□□□□ -0.19
MRPL55-217ENST00000366746 DPAGT1Q9H3H5 408 aa13.84□□□□□ -0.19
MRPL55-217ENST00000366746 GMPR2Q9P2T1 348 aaKnown RBP13.84□□□□□ -0.19
MRPL55-217ENST00000366746 B9D1Q9UPM9 204 aa13.84□□□□□ -0.19
MRPL55-217ENST00000366746 IGLV1-36A0A0B4J1U3 117 aa13.83□□□□□ -0.2
MRPL55-217ENST00000366746 UNC119BA6NIH7 251 aa13.83□□□□□ -0.2
MRPL55-217ENST00000366746 SLC22A31A6NKX4 558 aa13.83□□□□□ -0.2
MRPL55-217ENST00000366746 GMDSO60547 372 aa13.83□□□□□ -0.2
MRPL55-217ENST00000366746 PPP1R3DO95685 299 aa13.83□□□□□ -0.2
MRPL55-217ENST00000366746 RENP00797 406 aa13.83□□□□□ -0.2
MRPL55-217ENST00000366746 GGT2P36268 569 aa13.83□□□□□ -0.2
MRPL55-217ENST00000366746 OMPP47874 163 aa13.83□□□□□ -0.2
MRPL55-217ENST00000366746 TPTEP56180 551 aa13.83□□□□□ -0.2
MRPL55-217ENST00000366746 ARF6P62330 175 aa13.83□□□□□ -0.2
MRPL55-217ENST00000366746 HOXA4Q00056 320 aaPredicted RBP13.83□□□□□ -0.2
MRPL55-217ENST00000366746 SF3A3Q12874 501 aaKnown RBP eCLIP13.83□□□□□ -0.27e-7■■■□□ 18.1
MRPL55-217ENST00000366746 SLC18B1Q6NT16 456 aa13.83□□□□□ -0.2
MRPL55-217ENST00000366746 SMARCD3Q6STE5 483 aa13.83□□□□□ -0.2
MRPL55-217ENST00000366746 LINC00346Q8IVM7 164 aa13.83□□□□□ -0.2
MRPL55-217ENST00000366746 SLC15A3Q8IY34 581 aa13.83□□□□□ -0.2
MRPL55-217ENST00000366746 OR6V1Q8N148 313 aa13.83□□□□□ -0.2
MRPL55-217ENST00000366746 PLPP7Q8NBV4 271 aa13.83□□□□□ -0.2
MRPL55-217ENST00000366746 SLC26A10Q8NG04 563 aa13.83□□□□□ -0.2
MRPL55-217ENST00000366746 RCN3Q96D15 328 aa13.83□□□□□ -0.2
MRPL55-217ENST00000366746 SIRPDQ9H106 197 aa13.83□□□□□ -0.2
MRPL55-217ENST00000366746 FAM96BQ9Y3D0 163 aa13.83□□□□□ -0.2
MRPL55-217ENST00000366746 CAPN7Q9Y6W3 813 aa13.83□□□□□ -0.2
MRPL55-217ENST00000366746 A0A0U1RQK1 487 aa13.82□□□□□ -0.2
MRPL55-217ENST00000366746 OOEPA6NGQ2 149 aa13.82□□□□□ -0.2
MRPL55-217ENST00000366746 CD300LBA8K4G0 201 aa13.82□□□□□ -0.2
MRPL55-217ENST00000366746 ECDO95905 644 aaPredicted RBP13.82□□□□□ -0.2
MRPL55-217ENST00000366746 HLA-DQA2P01906 255 aa13.82□□□□□ -0.2
MRPL55-217ENST00000366746 PROK1P58294 105 aa13.82□□□□□ -0.2
MRPL55-217ENST00000366746 FXYD6P3P58550 94 aa13.82□□□□□ -0.2
MRPL55-217ENST00000366746 C11orf91Q3C1V1 193 aa13.82□□□□□ -0.2
MRPL55-217ENST00000366746 GDPGP1Q6ZNW5 385 aa13.82□□□□□ -0.2
MRPL55-217ENST00000366746 BTN2A1Q7KYR7 527 aa13.82□□□□□ -0.2
MRPL55-217ENST00000366746 TSEN54Q7Z6J9 526 aaKnown RBP13.82□□□□□ -0.2
MRPL55-217ENST00000366746 FAM162AQ96A26 154 aa13.82□□□□□ -0.2
MRPL55-217ENST00000366746 NMNAT3Q96T66 252 aa13.82□□□□□ -0.2
MRPL55-217ENST00000366746 ADAT1Q9BUB4 502 aaKnown RBP13.82□□□□□ -0.2
MRPL55-217ENST00000366746 SMURF1Q9HCE7 757 aa13.82□□□□□ -0.2
MRPL55-217ENST00000366746 C1orf123Q9NWV4 160 aa13.82□□□□□ -0.2
MRPL55-217ENST00000366746 GGT3PA6NGU5 568 aa13.81□□□□□ -0.2
MRPL55-217ENST00000366746 GYPAP02724 150 aa13.81□□□□□ -0.2
MRPL55-217ENST00000366746 GRPP07492 148 aa13.81□□□□□ -0.2
MRPL55-217ENST00000366746 LDLRAD3Q86YD5 345 aa13.81□□□□□ -0.2
MRPL55-217ENST00000366746 C1QL4Q86Z23 238 aa13.81□□□□□ -0.2
MRPL55-217ENST00000366746 PDZD9Q8IXQ8 264 aa13.81□□□□□ -0.2
MRPL55-217ENST00000366746 ZSCAN4Q8NAM6 433 aaPredicted RBP13.81□□□□□ -0.2
MRPL55-217ENST00000366746 LRTOMTQ8WZ04 291 aa13.81□□□□□ -0.2
MRPL55-217ENST00000366746 SPTSSAQ969W0 71 aa13.81□□□□□ -0.2
MRPL55-217ENST00000366746 NSRP1Q9H0G5 558 aaKnown RBP13.81□□□□□ -0.2
MRPL55-217ENST00000366746 CNTD2Q9H8S5 307 aa13.81□□□□□ -0.2
MRPL55-217ENST00000366746 RPRD1BQ9NQG5 326 aaKnown RBP13.81□□□□□ -0.2
MRPL55-217ENST00000366746 CYB5R1Q9UHQ9 305 aa13.81□□□□□ -0.2
MRPL55-217ENST00000366746 TRBV4-1A0A0J9YWV2 114 aa13.8□□□□□ -0.2
MRPL55-217ENST00000366746 A6NLC8 198 aa13.8□□□□□ -0.2
MRPL55-217ENST00000366746 M0R135 149 aa13.8□□□□□ -0.2
MRPL55-217ENST00000366746 DVL1O14640 695 aa13.8□□□□□ -0.2
MRPL55-217ENST00000366746 OR10H3O60404 316 aa13.8□□□□□ -0.2
MRPL55-217ENST00000366746 PTBP3O95758 552 aaKnown RBP13.8□□□□□ -0.2
MRPL55-217ENST00000366746 RHCEP18577 417 aa13.8□□□□□ -0.2
MRPL55-217ENST00000366746 NOS3P29474 1203 aa13.8□□□□□ -0.2
MRPL55-217ENST00000366746 SLC6A6P31641 620 aa13.8□□□□□ -0.2
MRPL55-217ENST00000366746 MZT1Q08AG7 82 aa13.8□□□□□ -0.2
MRPL55-217ENST00000366746 KRT72Q14CN4 511 aa13.8□□□□□ -0.2
MRPL55-217ENST00000366746 RFX4Q33E94 735 aa13.8□□□□□ -0.2
MRPL55-217ENST00000366746 SPERTQ8NA61 448 aa13.8□□□□□ -0.2
MRPL55-217ENST00000366746 OR4K13Q8NH42 304 aa13.8□□□□□ -0.2
MRPL55-217ENST00000366746 OR52J3Q8NH60 311 aa13.8□□□□□ -0.2
MRPL55-217ENST00000366746 FAM110DQ8TAY7 271 aaPredicted RBP13.8□□□□□ -0.2
MRPL55-217ENST00000366746 FANK1Q8TC84 345 aa13.8□□□□□ -0.2
MRPL55-217ENST00000366746 ZNF799Q96GE5 643 aa13.8□□□□□ -0.2
MRPL55-217ENST00000366746 HOPXQ9BPY8 73 aaPredicted RBP13.8□□□□□ -0.2
MRPL55-217ENST00000366746 PNRC2Q9NPJ4 139 aaKnown RBP13.8□□□□□ -0.2
MRPL55-217ENST00000366746 MRPL15Q9P015 296 aaKnown RBP13.8□□□□□ -0.2
MRPL55-217ENST00000366746 NDUFAF4Q9P032 175 aa13.8□□□□□ -0.2
MRPL55-217ENST00000366746 CAB39Q9Y376 341 aaPredicted RBP13.8□□□□□ -0.2
MRPL55-217ENST00000366746 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP13.79□□□□□ -0.2
MRPL55-217ENST00000366746 A0A1B0GVI7 797 aa13.79□□□□□ -0.2
MRPL55-217ENST00000366746 hCG_1807616A0A1W2PRN6 198 aa13.79□□□□□ -0.2
MRPL55-217ENST00000366746 BTBD17A6NE02 478 aa13.79□□□□□ -0.2
MRPL55-217ENST00000366746 ARPC3O15145 178 aa13.79□□□□□ -0.2
MRPL55-217ENST00000366746 SLC22A2O15244 555 aa13.79□□□□□ -0.2
MRPL55-217ENST00000366746 TSPAN15O95858 294 aa13.79□□□□□ -0.2
MRPL55-217ENST00000366746 HIST1H1CP16403 213 aaKnown RBP13.79□□□□□ -0.2
MRPL55-217ENST00000366746 ZNF823P16415 610 aa13.79□□□□□ -0.2
MRPL55-217ENST00000366746 SLC7A2P52569 658 aa13.79□□□□□ -0.2
MRPL55-217ENST00000366746 ZNF92Q03936 586 aa13.79□□□□□ -0.2
MRPL55-217ENST00000366746 DBPQ10586 325 aaPredicted RBP13.79□□□□□ -0.2
MRPL55-217ENST00000366746 POU4F2Q12837 409 aa13.79□□□□□ -0.2
MRPL55-217ENST00000366746 SEC23BQ15437 767 aa13.79□□□□□ -0.2
MRPL55-217ENST00000366746 C2orf68Q2NKX9 166 aa13.79□□□□□ -0.2
MRPL55-217ENST00000366746 CDONQ4KMG0 1287 aa13.79□□□□□ -0.2
MRPL55-217ENST00000366746 DHRS7BQ6IAN0 325 aaPredicted RBP13.79□□□□□ -0.2
MRPL55-217ENST00000366746 Q6ZSV7 163 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms