RNA–Protein interactions for RNA: ENST00000361804.4

SMC3-201, Transcript of structural maintenance of chromosomes 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC3, Length 4,114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3-201ENST00000361804 TMEM200CA6NKL6 621 aa9.4□□□□□ -0.91
SMC3-201ENST00000361804 A8MVM7 634 aa9.4□□□□□ -0.91
SMC3-201ENST00000361804 ALG1L2C9J202 215 aa9.4□□□□□ -0.91
SMC3-201ENST00000361804 NPIPA5E9PKD4 350 aa9.4□□□□□ -0.91
SMC3-201ENST00000361804 E9PLN8 166 aa9.4□□□□□ -0.91
SMC3-201ENST00000361804 SULT1C2O00338 296 aa9.4□□□□□ -0.91
SMC3-201ENST00000361804 PHYHO14832 338 aa9.4□□□□□ -0.91
SMC3-201ENST00000361804 RAMP1O60894 148 aa9.4□□□□□ -0.91
SMC3-201ENST00000361804 ATG12O94817 140 aa9.4□□□□□ -0.91
SMC3-201ENST00000361804 IFI6P09912 130 aa9.4□□□□□ -0.91
SMC3-201ENST00000361804 POLR2HP52434 150 aaKnown RBP9.4□□□□□ -0.91
SMC3-201ENST00000361804 BIDP55957 195 aa9.4□□□□□ -0.91
SMC3-201ENST00000361804 MICBQ29980 383 aa9.4□□□□□ -0.91
SMC3-201ENST00000361804 PAN3Q58A45 887 aaKnown RBP9.4□□□□□ -0.91
SMC3-201ENST00000361804 PLAC9Q5JTB6 97 aa9.4□□□□□ -0.91
SMC3-201ENST00000361804 NAA40Q86UY6 237 aa9.4□□□□□ -0.91
SMC3-201ENST00000361804 LYPD6Q86Y78 171 aa9.4□□□□□ -0.91
SMC3-201ENST00000361804 OR5AP2Q8NGF4 316 aa9.4□□□□□ -0.91
SMC3-201ENST00000361804 THAP6Q8TBB0 222 aa9.4□□□□□ -0.91
SMC3-201ENST00000361804 VN1R1Q9GZP7 353 aa9.4□□□□□ -0.91
SMC3-201ENST00000361804 NPIPA1Q9UND3 350 aa9.4□□□□□ -0.91
SMC3-201ENST00000361804 NCOA6Q14686 2063 aaPredicted RBP9.39□□□□□ -0.91
SMC3-201ENST00000361804 SYT7O43581 403 aa9.39□□□□□ -0.91
SMC3-201ENST00000361804 NPBWR1P48145 328 aa9.39□□□□□ -0.91
SMC3-201ENST00000361804 EIF4E3Q8N5X7 224 aaKnown RBP9.39□□□□□ -0.91
SMC3-201ENST00000361804 IGKV3D-11A0A0A0MRZ8 115 aa9.39□□□□□ -0.91
SMC3-201ENST00000361804 A0A1W2PNR3 127 aa9.39□□□□□ -0.91
SMC3-201ENST00000361804 RCC1P18754 421 aaPredicted RBP9.39□□□□□ -0.91
SMC3-201ENST00000361804 GALNTL5Q7Z4T8 443 aa9.39□□□□□ -0.91
SMC3-201ENST00000361804 INO80EQ8NBZ0 244 aaPredicted RBP9.39□□□□□ -0.91
SMC3-201ENST00000361804 OR4A4PQ8NGN8 299 aa9.39□□□□□ -0.91
SMC3-201ENST00000361804 SLAMF6Q96DU3 332 aa9.39□□□□□ -0.91
SMC3-201ENST00000361804 TMEM41AQ96HV5 264 aa9.39□□□□□ -0.91
SMC3-201ENST00000361804 PELOQ9BRX2 385 aaKnown RBP9.39□□□□□ -0.91
SMC3-201ENST00000361804 RNF126Q9BV68 326 aa9.39□□□□□ -0.91
SMC3-201ENST00000361804 HRH4Q9H3N8 390 aa9.39□□□□□ -0.91
SMC3-201ENST00000361804 CHMP1AQ9HD42 196 aaPredicted RBP9.39□□□□□ -0.91
SMC3-201ENST00000361804 ZNF814B7Z6K7 855 aa9.39□□□□□ -0.91
SMC3-201ENST00000361804 FTCDNL1E5RQL4 147 aa9.39□□□□□ -0.91
SMC3-201ENST00000361804 EFNA2O43921 213 aa9.39□□□□□ -0.91
SMC3-201ENST00000361804 FARS2O95363 451 aaKnown RBP9.39□□□□□ -0.91
SMC3-201ENST00000361804 AGTR1P30556 359 aa9.39□□□□□ -0.91
SMC3-201ENST00000361804 SCAND1P57086 179 aa9.39□□□□□ -0.91
SMC3-201ENST00000361804 TLE3Q04726 772 aa9.39□□□□□ -0.91
SMC3-201ENST00000361804 MITD1Q8WV92 249 aa9.39□□□□□ -0.91
SMC3-201ENST00000361804 FOXRED1Q96CU9 486 aaPredicted RBP9.39□□□□□ -0.91
SMC3-201ENST00000361804 PHB2Q99623 299 aa9.39□□□□□ -0.91
SMC3-201ENST00000361804 GSKIPQ9P0R6 139 aa9.39□□□□□ -0.91
SMC3-201ENST00000361804 IFNA6P05013 189 aa9.38□□□□□ -0.91
SMC3-201ENST00000361804 EMP2P54851 167 aa9.38□□□□□ -0.91
SMC3-201ENST00000361804 FOXF1Q12946 379 aa9.38□□□□□ -0.91
SMC3-201ENST00000361804 NAXEQ8NCW5 288 aa9.38□□□□□ -0.91
SMC3-201ENST00000361804 ASB10Q8WXI3 467 aa9.38□□□□□ -0.91
SMC3-201ENST00000361804 LIN37Q96GY3 246 aaPredicted RBP9.38□□□□□ -0.91
SMC3-201ENST00000361804 ST6GALNAC5Q9BVH7 336 aa9.38□□□□□ -0.91
SMC3-201ENST00000361804 PBOV1Q9GZY1 135 aa9.38□□□□□ -0.91
SMC3-201ENST00000361804 FAM206AQ9NX38 181 aa9.38□□□□□ -0.91
SMC3-201ENST00000361804 NCKAP5O14513 1909 aa9.38□□□□□ -0.91
SMC3-201ENST00000361804 ZNF705EA8MWA4 302 aaPredicted RBP9.38□□□□□ -0.91
SMC3-201ENST00000361804 RER1O15258 196 aa9.38□□□□□ -0.91
SMC3-201ENST00000361804 OR2F2O95006 317 aa9.38□□□□□ -0.91
SMC3-201ENST00000361804 SLC6A8P48029 635 aa9.38□□□□□ -0.91
SMC3-201ENST00000361804 OR2F1Q13607 317 aa9.38□□□□□ -0.91
SMC3-201ENST00000361804 GLIPR1L1Q6UWM5 242 aa9.38□□□□□ -0.91
SMC3-201ENST00000361804 DRAM2Q6UX65 266 aa9.38□□□□□ -0.91
SMC3-201ENST00000361804 C1QL2Q7Z5L3 287 aa9.38□□□□□ -0.91
SMC3-201ENST00000361804 GTPBP8Q8N3Z3 284 aaPredicted RBP9.38□□□□□ -0.91
SMC3-201ENST00000361804 OR1M1Q8NGA1 313 aa9.38□□□□□ -0.91
SMC3-201ENST00000361804 OR4K15Q8NH41 348 aa9.38□□□□□ -0.91
SMC3-201ENST00000361804 TMEM230Q96A57 120 aa9.38□□□□□ -0.91
SMC3-201ENST00000361804 OR10C1Q96KK4 312 aa9.38□□□□□ -0.91
SMC3-201ENST00000361804 C5orf66Q9H5L9 145 aa9.38□□□□□ -0.91
SMC3-201ENST00000361804 ZNF304Q9HCX3 659 aa9.38□□□□□ -0.91
SMC3-201ENST00000361804 TREM1Q9NP99 234 aa9.38□□□□□ -0.91
SMC3-201ENST00000361804 SLC17A5Q9NRA2 495 aa9.38□□□□□ -0.91
SMC3-201ENST00000361804 A0A1W2PPC4 97 aa9.38□□□□□ -0.91
SMC3-201ENST00000361804 MED19A0JLT2 244 aaPredicted RBP9.38□□□□□ -0.91
SMC3-201ENST00000361804 TMEM218A2RU14 115 aa9.38□□□□□ -0.91
SMC3-201ENST00000361804 F8W036 122 aa9.38□□□□□ -0.91
SMC3-201ENST00000361804 CRHP06850 196 aa9.38□□□□□ -0.91
SMC3-201ENST00000361804 GLI4P10075 376 aa9.38□□□□□ -0.91
SMC3-201ENST00000361804 FSTP19883 344 aa9.38□□□□□ -0.91
SMC3-201ENST00000361804 BLOC1S1P78537 153 aa9.38□□□□□ -0.91
SMC3-201ENST00000361804 QRFPP83859 136 aa9.38□□□□□ -0.91
SMC3-201ENST00000361804 ABHD12BQ7Z5M8 362 aaPredicted RBP9.38□□□□□ -0.91
SMC3-201ENST00000361804 LINC00518Q8N0U6 118 aa9.38□□□□□ -0.91
SMC3-201ENST00000361804 OR4K17Q8NGC6 315 aa9.38□□□□□ -0.91
SMC3-201ENST00000361804 MTIF3Q9H2K0 278 aaKnown RBP9.38□□□□□ -0.91
SMC3-201ENST00000361804 ACKR4Q9NPB9 350 aa9.38□□□□□ -0.91
SMC3-201ENST00000361804 METTL21EPA6NDL7 271 aa9.37□□□□□ -0.91
SMC3-201ENST00000361804 HOXB5P09067 269 aa9.37□□□□□ -0.91
SMC3-201ENST00000361804 DRD1P21728 446 aa9.37□□□□□ -0.91
SMC3-201ENST00000361804 GLRA1P23415 457 aa9.37□□□□□ -0.91
SMC3-201ENST00000361804 PNLIPRP2P54317 469 aa9.37□□□□□ -0.91
SMC3-201ENST00000361804 CLDN6P56747 220 aa9.37□□□□□ -0.91
SMC3-201ENST00000361804 MRPS21P82921 87 aaKnown RBP9.37□□□□□ -0.91
SMC3-201ENST00000361804 HSF1Q00613 529 aa9.37□□□□□ -0.91
SMC3-201ENST00000361804 ELAVL1Q15717 326 aaKnown RBP9.37□□□□□ -0.91
SMC3-201ENST00000361804 ANKRD55Q3KP44 614 aa9.37□□□□□ -0.91
SMC3-201ENST00000361804 C1orf100Q5SVJ3 147 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms