RNA–Protein interactions for RNA: ENST00000361545.9

CLIP2-202, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best) BASIC

Gene CLIP2, Length 5,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-202ENST00000361545 SLC25A21Q9BQT8 299 aaPredicted RBP16.72■□□□□ 0.27
CLIP2-202ENST00000361545 COL5A3P25940 1745 aaPredicted RBP16.72■□□□□ 0.27
CLIP2-202ENST00000361545 GSK3AP49840 483 aa16.72■□□□□ 0.27
CLIP2-202ENST00000361545 FABP5Q01469 135 aa16.72■□□□□ 0.27
CLIP2-202ENST00000361545 AQP6Q13520 282 aa16.72■□□□□ 0.27
CLIP2-202ENST00000361545 OR10D3Q8NH80 312 aa16.72■□□□□ 0.27
CLIP2-202ENST00000361545 FAM213BQ8TBF2 198 aa16.72■□□□□ 0.27
CLIP2-202ENST00000361545 FCN2Q15485 313 aa16.72■□□□□ 0.27
CLIP2-202ENST00000361545 CALHM3Q86XJ0 350 aa16.72■□□□□ 0.27
CLIP2-202ENST00000361545 OR2Y1Q8NGV0 311 aa16.72■□□□□ 0.27
CLIP2-202ENST00000361545 SEH1LQ96EE3 360 aa16.72■□□□□ 0.27
CLIP2-202ENST00000361545 RHNO1Q9BSD3 238 aa16.72■□□□□ 0.27
CLIP2-202ENST00000361545 NARFLQ9H6Q4 476 aa16.72■□□□□ 0.27
CLIP2-202ENST00000361545 CCSO14618 274 aa16.71■□□□□ 0.27
CLIP2-202ENST00000361545 SPRY1O43609 319 aaPredicted RBP16.71■□□□□ 0.27
CLIP2-202ENST00000361545 TGFBR1P36897 503 aa16.71■□□□□ 0.27
CLIP2-202ENST00000361545 C2orf76Q3KRA6 126 aa16.71■□□□□ 0.27
CLIP2-202ENST00000361545 RHOUQ7L0Q8 258 aa16.71■□□□□ 0.27
CLIP2-202ENST00000361545 CISD2Q8N5K1 135 aaKnown RBP16.71■□□□□ 0.27
CLIP2-202ENST00000361545 HSD17B11Q8NBQ5 300 aa16.71■□□□□ 0.27
CLIP2-202ENST00000361545 COL11A2P13942 1736 aaPredicted RBP16.71■□□□□ 0.27
CLIP2-202ENST00000361545 ECI1P42126 302 aa16.71■□□□□ 0.27
CLIP2-202ENST00000361545 PEA15Q15121 130 aa16.71■□□□□ 0.27
CLIP2-202ENST00000361545 CPEB4Q17RY0 729 aaKnown RBP eCLIP16.71■□□□□ 0.27
CLIP2-202ENST00000361545 ZNF425Q6IV72 752 aa16.71■□□□□ 0.27
CLIP2-202ENST00000361545 WDR74Q6RFH5 385 aaPredicted RBP16.71■□□□□ 0.27
CLIP2-202ENST00000361545 OR1F12Q8NHA8 337 aa16.71■□□□□ 0.27
CLIP2-202ENST00000361545 APOBEC3DQ96AK3 386 aaPredicted RBP16.71■□□□□ 0.27
CLIP2-202ENST00000361545 DUS3LQ96G46 650 aaKnown RBP16.71■□□□□ 0.27
CLIP2-202ENST00000361545 FZR1Q9UM11 496 aa16.71■□□□□ 0.27
CLIP2-202ENST00000361545 TRIOBPQ9H2D6 2365 aa16.71■□□□□ 0.27
CLIP2-202ENST00000361545 AADACP22760 399 aa16.71■□□□□ 0.27
CLIP2-202ENST00000361545 GPM6AP51674 278 aa16.71■□□□□ 0.27
CLIP2-202ENST00000361545 ZXDAP98168 799 aa16.71■□□□□ 0.27
CLIP2-202ENST00000361545 CBLN3Q6UW01 205 aa16.71■□□□□ 0.27
CLIP2-202ENST00000361545 STAC2Q6ZMT1 411 aa16.71■□□□□ 0.27
CLIP2-202ENST00000361545 TMEM43Q9BTV4 400 aa16.71■□□□□ 0.27
CLIP2-202ENST00000361545 ST3GAL6Q9Y274 331 aa16.71■□□□□ 0.27
CLIP2-202ENST00000361545 FAM96BQ9Y3D0 163 aa16.71■□□□□ 0.27
CLIP2-202ENST00000361545 OR8U8P0C7N1 319 aa16.71■□□□□ 0.27
CLIP2-202ENST00000361545 SOX8P57073 446 aa16.71■□□□□ 0.27
CLIP2-202ENST00000361545 RPS27AP62979 156 aaKnown RBP16.71■□□□□ 0.27
CLIP2-202ENST00000361545 UBA52P62987 128 aaKnown RBP16.71■□□□□ 0.27
CLIP2-202ENST00000361545 CNTNAP3Q9BZ76 1288 aa16.71■□□□□ 0.27
CLIP2-202ENST00000361545 A0A0D9SG52 128 aa16.71■□□□□ 0.26
CLIP2-202ENST00000361545 ZNF816-ZNF321PA0A0X1KG74 233 aa16.71■□□□□ 0.26
CLIP2-202ENST00000361545 AIPO00170 330 aa16.71■□□□□ 0.26
CLIP2-202ENST00000361545 NUPL2O15504 423 aaKnown RBP16.71■□□□□ 0.26
CLIP2-202ENST00000361545 YIF1AO95070 293 aa16.71■□□□□ 0.26
CLIP2-202ENST00000361545 CTXN2P0C2S0 81 aa16.71■□□□□ 0.26
CLIP2-202ENST00000361545 DGCR2P98153 550 aa16.71■□□□□ 0.26
CLIP2-202ENST00000361545 RNPS1Q15287 305 aaKnown RBP16.71■□□□□ 0.26
CLIP2-202ENST00000361545 RFPL4BQ6ZWI9 263 aa16.71■□□□□ 0.26
CLIP2-202ENST00000361545 TRPM6Q9BX84 2022 aa16.7■□□□□ 0.26
CLIP2-202ENST00000361545 PMS2P2O95744 297 aa16.7■□□□□ 0.26
CLIP2-202ENST00000361545 CT45A6P0DMU7 189 aa16.7■□□□□ 0.26
CLIP2-202ENST00000361545 CT45A5P0DMU8 189 aa16.7■□□□□ 0.26
CLIP2-202ENST00000361545 CT45A7P0DMV0 189 aa16.7■□□□□ 0.26
CLIP2-202ENST00000361545 CT45A8P0DMV1 189 aa16.7■□□□□ 0.26
CLIP2-202ENST00000361545 CT45A9P0DMV2 189 aa16.7■□□□□ 0.26
CLIP2-202ENST00000361545 CT45A2Q5DJT8 189 aa16.7■□□□□ 0.26
CLIP2-202ENST00000361545 CT45A1Q5HYN5 189 aa16.7■□□□□ 0.26
CLIP2-202ENST00000361545 TIGD3Q6B0B8 471 aa16.7■□□□□ 0.26
CLIP2-202ENST00000361545 OR6K3Q8NGY3 331 aa16.7■□□□□ 0.26
CLIP2-202ENST00000361545 CT45A3Q8NHU0 189 aa16.7■□□□□ 0.26
CLIP2-202ENST00000361545 FABP7O15540 132 aa16.7■□□□□ 0.26
CLIP2-202ENST00000361545 NME2P22392 152 aa16.7■□□□□ 0.26
CLIP2-202ENST00000361545 LILRB4Q8NHJ6 448 aa16.7■□□□□ 0.26
CLIP2-202ENST00000361545 ZNF436Q9C0F3 470 aaPredicted RBP16.7■□□□□ 0.26
CLIP2-202ENST00000361545 GPANK1O95872 356 aa16.7■□□□□ 0.26
CLIP2-202ENST00000361545 OR2Z1Q8NG97 314 aa16.7■□□□□ 0.26
CLIP2-202ENST00000361545 DUSP21Q9H596 190 aa16.7■□□□□ 0.26
CLIP2-202ENST00000361545 IGHV5-10-1A0A0J9YXX1 117 aa16.7■□□□□ 0.26
CLIP2-202ENST00000361545 LRP5LA4QPB2 252 aa16.7■□□□□ 0.26
CLIP2-202ENST00000361545 TBX19O60806 448 aa16.7■□□□□ 0.26
CLIP2-202ENST00000361545 ZIC2O95409 532 aaPredicted RBP16.7■□□□□ 0.26
CLIP2-202ENST00000361545 POU3F3P20264 500 aaPredicted RBP16.7■□□□□ 0.26
CLIP2-202ENST00000361545 MSRB3Q8IXL7 192 aa16.7■□□□□ 0.26
CLIP2-202ENST00000361545 OR51A4Q8NGJ6 313 aa16.7■□□□□ 0.26
CLIP2-202ENST00000361545 SLC39A9Q9NUM3 307 aa16.7■□□□□ 0.26
CLIP2-202ENST00000361545 MDFIC2A0A1B0GVS7 189 aa16.69■□□□□ 0.26
CLIP2-202ENST00000361545 LYZL6O75951 148 aa16.69■□□□□ 0.26
CLIP2-202ENST00000361545 JMJD6Q6NYC1 403 aaPredicted RBP16.69■□□□□ 0.26
CLIP2-202ENST00000361545 SFTPA2Q8IWL1 248 aa16.69■□□□□ 0.26
CLIP2-202ENST00000361545 OR4Q3Q8NH05 313 aa16.69■□□□□ 0.26
CLIP2-202ENST00000361545 HMGCLL1Q8TB92 370 aa16.69■□□□□ 0.26
CLIP2-202ENST00000361545 SIGLEC7Q9Y286 467 aa16.69■□□□□ 0.26
CLIP2-202ENST00000361545 LRP12Q9Y561 859 aa16.69■□□□□ 0.26
CLIP2-202ENST00000361545 ANGPTL7O43827 346 aa16.69■□□□□ 0.26
CLIP2-202ENST00000361545 ZIC1Q15915 447 aa16.69■□□□□ 0.26
CLIP2-202ENST00000361545 OR2AE1Q8NHA4 323 aa16.69■□□□□ 0.26
CLIP2-202ENST00000361545 KIAA1217Q5T5P2 1943 aa16.69■□□□□ 0.26
CLIP2-202ENST00000361545 EPOPA6NHQ4 379 aa16.69■□□□□ 0.26
CLIP2-202ENST00000361545 IFITM5A6NNB3 132 aa16.69■□□□□ 0.26
CLIP2-202ENST00000361545 PLPP5Q8NEB5 264 aa16.69■□□□□ 0.26
CLIP2-202ENST00000361545 KIAA1456Q9P272 454 aa16.69■□□□□ 0.26
CLIP2-202ENST00000361545 SNRNP70P08621 437 aaKnown RBP16.69■□□□□ 0.26
CLIP2-202ENST00000361545 FBXL14Q8N1E6 418 aa16.69■□□□□ 0.26
CLIP2-202ENST00000361545 UGT2A1Q9Y4X1 527 aa16.69■□□□□ 0.26
CLIP2-202ENST00000361545 SPAG17Q6Q759 2223 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms