RNA–Protein interactions for RNA: ENST00000360515.7

CDC42SE2-201, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE2, Length 3,591 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-201ENST00000360515 SCG5P05408 212 aa4.77□□□□□ -1.65
CDC42SE2-201ENST00000360515 FAM90A15PP0C7V4 464 aa4.77□□□□□ -1.65
CDC42SE2-201ENST00000360515 FAM90A13PP0C7W8 464 aa4.77□□□□□ -1.65
CDC42SE2-201ENST00000360515 FAM90A14PP0C7W9 464 aa4.77□□□□□ -1.65
CDC42SE2-201ENST00000360515 FAM90A24PP0C7X0 464 aa4.77□□□□□ -1.65
CDC42SE2-201ENST00000360515 CCL2P13500 99 aa4.77□□□□□ -1.65
CDC42SE2-201ENST00000360515 AMY2BP19961 511 aa4.77□□□□□ -1.65
CDC42SE2-201ENST00000360515 CCNA2P20248 432 aa4.77□□□□□ -1.65
CDC42SE2-201ENST00000360515 CHI3L1P36222 383 aaPredicted RBP4.77□□□□□ -1.65
CDC42SE2-201ENST00000360515 CRATP43155 626 aa4.77□□□□□ -1.65
CDC42SE2-201ENST00000360515 ENTPD1P49961 510 aa4.77□□□□□ -1.65
CDC42SE2-201ENST00000360515 ERFP50548 548 aa4.77□□□□□ -1.65
CDC42SE2-201ENST00000360515 RPL27P61353 136 aaKnown RBP4.77□□□□□ -1.65
CDC42SE2-201ENST00000360515 SPANXN4Q5MJ08 99 aa4.77□□□□□ -1.65
CDC42SE2-201ENST00000360515 SZRD1Q7Z422 152 aa4.77□□□□□ -1.65
CDC42SE2-201ENST00000360515 CADM2Q8N3J6 435 aa4.77□□□□□ -1.65
CDC42SE2-201ENST00000360515 OR1F12Q8NHA8 337 aa4.77□□□□□ -1.65
CDC42SE2-201ENST00000360515 LZICQ8WZA0 190 aa4.77□□□□□ -1.65
CDC42SE2-201ENST00000360515 SLC25A36Q96CQ1 311 aa4.77□□□□□ -1.65
CDC42SE2-201ENST00000360515 ZNF582Q96NG8 517 aaPredicted RBP4.77□□□□□ -1.65
CDC42SE2-201ENST00000360515 FMO2Q99518 471 aa4.77□□□□□ -1.65
CDC42SE2-201ENST00000360515 SSX3Q99909 188 aa4.77□□□□□ -1.65
CDC42SE2-201ENST00000360515 CHCHD6Q9BRQ6 235 aa4.77□□□□□ -1.65
CDC42SE2-201ENST00000360515 TMEM109Q9BVC6 243 aa4.77□□□□□ -1.65
CDC42SE2-201ENST00000360515 SDR39U1Q9NRG7 319 aaPredicted RBP4.77□□□□□ -1.65
CDC42SE2-201ENST00000360515 RHBDL2Q9NX52 303 aa4.77□□□□□ -1.65
CDC42SE2-201ENST00000360515 RPS6KB2Q9UBS0 482 aa4.77□□□□□ -1.65
CDC42SE2-201ENST00000360515 SIRT4Q9Y6E7 314 aaPredicted RBP4.77□□□□□ -1.65
CDC42SE2-201ENST00000360515 IGHV3OR16-10A0A075B7F0 116 aa4.77□□□□□ -1.65
CDC42SE2-201ENST00000360515 PFDN1O60925 122 aa4.77□□□□□ -1.65
CDC42SE2-201ENST00000360515 FAM107AO95990 144 aa4.77□□□□□ -1.65
CDC42SE2-201ENST00000360515 MT-ND1P03886 318 aa4.77□□□□□ -1.65
CDC42SE2-201ENST00000360515 CCDC159P0C7I6 412 aa4.77□□□□□ -1.65
CDC42SE2-201ENST00000360515 ACSM4P0C7M7 580 aa4.77□□□□□ -1.65
CDC42SE2-201ENST00000360515 IGHV1-8P0DP01 117 aa4.77□□□□□ -1.65
CDC42SE2-201ENST00000360515 S100A3P33764 101 aa4.77□□□□□ -1.65
CDC42SE2-201ENST00000360515 MSX2P35548 267 aaPredicted RBP4.77□□□□□ -1.65
CDC42SE2-201ENST00000360515 RPL23AP62750 156 aaKnown RBP4.77□□□□□ -1.65
CDC42SE2-201ENST00000360515 RPL18Q07020 188 aaKnown RBP4.77□□□□□ -1.65
CDC42SE2-201ENST00000360515 MELKQ14680 651 aa4.77□□□□□ -1.65
CDC42SE2-201ENST00000360515 KIR2DS1Q14954 304 aa4.77□□□□□ -1.65
CDC42SE2-201ENST00000360515 C9orf66Q5T8R8 295 aa4.77□□□□□ -1.65
CDC42SE2-201ENST00000360515 ZNF770Q6IQ21 691 aaPredicted RBP4.77□□□□□ -1.65
CDC42SE2-201ENST00000360515 REEP3Q6NUK4 255 aa4.77□□□□□ -1.65
CDC42SE2-201ENST00000360515 Q6ZSR3 168 aa4.77□□□□□ -1.65
CDC42SE2-201ENST00000360515 RNF144BQ7Z419 303 aa4.77□□□□□ -1.65
CDC42SE2-201ENST00000360515 MOGAT3Q86VF5 341 aa4.77□□□□□ -1.65
CDC42SE2-201ENST00000360515 CCNYL1Q8N7R7 359 aa4.77□□□□□ -1.65
CDC42SE2-201ENST00000360515 MED30Q96HR3 178 aa4.77□□□□□ -1.65
CDC42SE2-201ENST00000360515 LYVE1Q9Y5Y7 322 aa4.77□□□□□ -1.65
CDC42SE2-201ENST00000360515 TRAPPC13A5PLN9 417 aa4.76□□□□□ -1.65
CDC42SE2-201ENST00000360515 TMEM210A6NLX4 147 aa4.76□□□□□ -1.65
CDC42SE2-201ENST00000360515 H3BUX3 64 aa4.76□□□□□ -1.65
CDC42SE2-201ENST00000360515 ARPC1BO15143 372 aaKnown RBP4.76□□□□□ -1.65
CDC42SE2-201ENST00000360515 CFLARO15519 480 aa4.76□□□□□ -1.65
CDC42SE2-201ENST00000360515 TPPPO94811 219 aa4.76□□□□□ -1.65
CDC42SE2-201ENST00000360515 OR5F1O95221 314 aa4.76□□□□□ -1.65
CDC42SE2-201ENST00000360515 CHRNGP07510 517 aa4.76□□□□□ -1.65
CDC42SE2-201ENST00000360515 CD34P28906 385 aa4.76□□□□□ -1.65
CDC42SE2-201ENST00000360515 GALNTL6Q49A17 601 aa4.76□□□□□ -1.65
CDC42SE2-201ENST00000360515 TNFAIP8L3Q5GJ75 292 aa4.76□□□□□ -1.65
CDC42SE2-201ENST00000360515 ZNF626Q68DY1 528 aa4.76□□□□□ -1.65
CDC42SE2-201ENST00000360515 THAP5Q7Z6K1 395 aa4.76□□□□□ -1.65
CDC42SE2-201ENST00000360515 OSR2Q8N2R0 312 aa4.76□□□□□ -1.65
CDC42SE2-201ENST00000360515 OR52H1Q8NGJ2 320 aa4.76□□□□□ -1.65
CDC42SE2-201ENST00000360515 GAFA1Q96PS6 74 aa4.76□□□□□ -1.65
CDC42SE2-201ENST00000360515 ZNF347Q96SE7 839 aa4.76□□□□□ -1.65
CDC42SE2-201ENST00000360515 FAM96BQ9Y3D0 163 aa4.76□□□□□ -1.65
CDC42SE2-201ENST00000360515 RAP2CQ9Y3L5 183 aa4.76□□□□□ -1.65
CDC42SE2-201ENST00000360515 HDAC3O15379 428 aa4.76□□□□□ -1.65
CDC42SE2-201ENST00000360515 PEX11AO75192 247 aa4.76□□□□□ -1.65
CDC42SE2-201ENST00000360515 ALDOCP09972 364 aaKnown RBP4.76□□□□□ -1.65
CDC42SE2-201ENST00000360515 IRF2P14316 349 aa4.76□□□□□ -1.65
CDC42SE2-201ENST00000360515 LBPP18428 481 aa4.76□□□□□ -1.65
CDC42SE2-201ENST00000360515 EFNA1P20827 205 aaPredicted RBP4.76□□□□□ -1.65
CDC42SE2-201ENST00000360515 EEF1B2P24534 225 aaKnown RBP4.76□□□□□ -1.65
CDC42SE2-201ENST00000360515 DDOSTP39656 456 aa4.76□□□□□ -1.65
CDC42SE2-201ENST00000360515 MTNR1BP49286 362 aa4.76□□□□□ -1.65
CDC42SE2-201ENST00000360515 PSMD7P51665 324 aa4.76□□□□□ -1.65
CDC42SE2-201ENST00000360515 SELPLGQ14242 412 aa4.76□□□□□ -1.65
CDC42SE2-201ENST00000360515 LINC00322Q6ZN03 302 aaPredicted RBP4.76□□□□□ -1.65
CDC42SE2-201ENST00000360515 SATL1Q86VE3 508 aa4.76□□□□□ -1.65
CDC42SE2-201ENST00000360515 JAZF1Q86VZ6 243 aa4.76□□□□□ -1.65
CDC42SE2-201ENST00000360515 CLEC4FQ8N1N0 589 aa4.76□□□□□ -1.65
CDC42SE2-201ENST00000360515 ITCHQ96J02 903 aa4.76□□□□□ -1.65
CDC42SE2-201ENST00000360515 SORT1Q99523 831 aa4.76□□□□□ -1.65
CDC42SE2-201ENST00000360515 MUC13Q9H3R2 512 aa4.76□□□□□ -1.65
CDC42SE2-201ENST00000360515 TPT1P8Q9HAU6 139 aa4.76□□□□□ -1.65
CDC42SE2-201ENST00000360515 NDUFAF1Q9Y375 327 aa4.76□□□□□ -1.65
CDC42SE2-201ENST00000360515 TMEM247A6NEH6 219 aa4.76□□□□□ -1.65
CDC42SE2-201ENST00000360515 OOSP1A8MZH6 123 aa4.76□□□□□ -1.65
CDC42SE2-201ENST00000360515 M0QZK8 103 aa4.76□□□□□ -1.65
CDC42SE2-201ENST00000360515 TYROBPO43914 113 aa4.76□□□□□ -1.65
CDC42SE2-201ENST00000360515 OR10H3O60404 316 aa4.76□□□□□ -1.65
CDC42SE2-201ENST00000360515 NOS1APO75052 506 aaPredicted RBP4.76□□□□□ -1.65
CDC42SE2-201ENST00000360515 BPGMP07738 259 aa4.76□□□□□ -1.65
CDC42SE2-201ENST00000360515 IDO1P14902 403 aa4.76□□□□□ -1.65
CDC42SE2-201ENST00000360515 DCTDP32321 178 aa4.76□□□□□ -1.65
CDC42SE2-201ENST00000360515 CFHR3Q02985 330 aa4.76□□□□□ -1.65
CDC42SE2-201ENST00000360515 TTC33Q6PID6 262 aaPredicted RBP4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms