RNA–Protein interactions for RNA: ENST00000360280.7

VPS13A-203, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13A, Length 15,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-203ENST00000360280 ADAT1Q9BUB4 502 aaKnown RBP8.48□□□□□ -1.05
VPS13A-203ENST00000360280 LINC00597Q9H2U6 94 aa8.48□□□□□ -1.05
VPS13A-203ENST00000360280 SLC22A20A6NK97 555 aa8.48□□□□□ -1.05
VPS13A-203ENST00000360280 GJA4P35212 333 aa8.48□□□□□ -1.05
VPS13A-203ENST00000360280 MEOX2P50222 304 aa8.48□□□□□ -1.05
VPS13A-203ENST00000360280 C1orf140Q5VVS0 124 aa8.48□□□□□ -1.05
VPS13A-203ENST00000360280 TMEM230Q96A57 120 aa8.48□□□□□ -1.05
VPS13A-203ENST00000360280 EMCNQ9ULC0 261 aa8.48□□□□□ -1.05
VPS13A-203ENST00000360280 SAXO2Q658L1 398 aa8.48□□□□□ -1.05
VPS13A-203ENST00000360280 MRPS24Q96EL2 167 aaKnown RBP8.48□□□□□ -1.05
VPS13A-203ENST00000360280 UBE2MP61081 183 aaKnown RBP8.48□□□□□ -1.05
VPS13A-203ENST00000360280 RPS16P62249 146 aaKnown RBP8.48□□□□□ -1.05
VPS13A-203ENST00000360280 PRTGQ2VWP7 1150 aa8.48□□□□□ -1.05
VPS13A-203ENST00000360280 PRSS45Q7RTY3 260 aa8.48□□□□□ -1.05
VPS13A-203ENST00000360280 TAAR2Q9P1P5 351 aa8.48□□□□□ -1.05
VPS13A-203ENST00000360280 RICTORQ6R327 1708 aa8.48□□□□□ -1.05
VPS13A-203ENST00000360280 SEMA7AO75326 666 aa8.48□□□□□ -1.05
VPS13A-203ENST00000360280 CD38P28907 300 aa8.48□□□□□ -1.05
VPS13A-203ENST00000360280 CLLU1Q5K131 121 aa8.48□□□□□ -1.05
VPS13A-203ENST00000360280 PRAMEF20Q5VT98 475 aa8.48□□□□□ -1.05
VPS13A-203ENST00000360280 VRK3Q8IV63 474 aa8.48□□□□□ -1.05
VPS13A-203ENST00000360280 CDCA3Q99618 268 aaPredicted RBP8.48□□□□□ -1.05
VPS13A-203ENST00000360280 LRFN3Q9BTN0 628 aa8.48□□□□□ -1.05
VPS13A-203ENST00000360280 ESPL1Q14674 2120 aa8.48□□□□□ -1.05
VPS13A-203ENST00000360280 PNLIPRP3Q17RR3 467 aa8.48□□□□□ -1.05
VPS13A-203ENST00000360280 C2orf50Q96LR7 162 aa8.47□□□□□ -1.05
VPS13A-203ENST00000360280 DCBLD2Q96PD2 775 aa8.47□□□□□ -1.05
VPS13A-203ENST00000360280 CHST2Q9Y4C5 530 aa8.47□□□□□ -1.05
VPS13A-203ENST00000360280 GCGP01275 180 aa8.47□□□□□ -1.05
VPS13A-203ENST00000360280 RPL27P61353 136 aaKnown RBP8.47□□□□□ -1.05
VPS13A-203ENST00000360280 CLDN10P78369 228 aa8.47□□□□□ -1.05
VPS13A-203ENST00000360280 LKAAEAR1Q8TD35 194 aa8.47□□□□□ -1.05
VPS13A-203ENST00000360280 NEIL1Q96FI4 390 aaPredicted RBP8.47□□□□□ -1.05
VPS13A-203ENST00000360280 FLVCR2Q9UPI3 526 aa8.47□□□□□ -1.05
VPS13A-203ENST00000360280 SIPA1L2Q9P2F8 1722 aaPredicted RBP8.47□□□□□ -1.05
VPS13A-203ENST00000360280 TRAV34A0A0B4J273 112 aa8.47□□□□□ -1.05
VPS13A-203ENST00000360280 A0A1W2PNV4 684 aa8.47□□□□□ -1.05
VPS13A-203ENST00000360280 HCRTR1O43613 425 aa8.47□□□□□ -1.05
VPS13A-203ENST00000360280 TBX19O60806 448 aa8.47□□□□□ -1.05
VPS13A-203ENST00000360280 NRASP01111 189 aa8.47□□□□□ -1.05
VPS13A-203ENST00000360280 CSNK1DP48730 415 aa8.47□□□□□ -1.05
VPS13A-203ENST00000360280 ZNF789Q5FWF6 425 aa8.47□□□□□ -1.05
VPS13A-203ENST00000360280 ZNF343Q6P1L6 599 aa8.47□□□□□ -1.05
VPS13A-203ENST00000360280 LANCL2Q9NS86 450 aa8.47□□□□□ -1.05
VPS13A-203ENST00000360280 FITM1A5D6W6 292 aa8.47□□□□□ -1.05
VPS13A-203ENST00000360280 PNRC1Q12796 327 aaPredicted RBP8.47□□□□□ -1.05
VPS13A-203ENST00000360280 Q6ZPB1 254 aaPredicted RBP8.47□□□□□ -1.05
VPS13A-203ENST00000360280 AGBL5Q8NDL9 886 aa8.47□□□□□ -1.05
VPS13A-203ENST00000360280 NXF2Q9GZY0 626 aaKnown RBP8.47□□□□□ -1.05
VPS13A-203ENST00000360280 RBPJLQ9UBG7 517 aa8.47□□□□□ -1.05
VPS13A-203ENST00000360280 TCTAP57738 103 aa8.47□□□□□ -1.05
VPS13A-203ENST00000360280 RACK1P63244 317 aaKnown RBP8.47□□□□□ -1.05
VPS13A-203ENST00000360280 RTL10Q7L3V2 364 aa8.47□□□□□ -1.05
VPS13A-203ENST00000360280 OR4F17Q8NGA8 305 aa8.47□□□□□ -1.05
VPS13A-203ENST00000360280 KCND3Q9UK17 655 aa8.47□□□□□ -1.05
VPS13A-203ENST00000360280 CLDN34H7C241 214 aa8.47□□□□□ -1.05
VPS13A-203ENST00000360280 APEHP13798 732 aaKnown RBP8.47□□□□□ -1.05
VPS13A-203ENST00000360280 MANEAQ5SRI9 462 aa8.47□□□□□ -1.05
VPS13A-203ENST00000360280 ATG2BQ96BY7 2078 aa8.47□□□□□ -1.05
VPS13A-203ENST00000360280 IFITM5A6NNB3 132 aa8.47□□□□□ -1.05
VPS13A-203ENST00000360280 TPSD1Q9BZJ3 242 aa8.47□□□□□ -1.05
VPS13A-203ENST00000360280 IRS1P35568 1242 aa8.47□□□□□ -1.05
VPS13A-203ENST00000360280 NIPSNAP1Q9BPW8 284 aa8.47□□□□□ -1.05
VPS13A-203ENST00000360280 OCEL1Q9H607 264 aa8.47□□□□□ -1.05
VPS13A-203ENST00000360280 PTGER1P34995 402 aa8.47□□□□□ -1.05
VPS13A-203ENST00000360280 Q3ZCU0 254 aa8.47□□□□□ -1.05
VPS13A-203ENST00000360280 ADGRL4Q9HBW9 690 aa8.47□□□□□ -1.05
VPS13A-203ENST00000360280 DUXBA0A1W2PPF3 345 aa8.47□□□□□ -1.05
VPS13A-203ENST00000360280 SULT1A1P50225 295 aa8.47□□□□□ -1.05
VPS13A-203ENST00000360280 LAIR1Q6GTX8 287 aa8.47□□□□□ -1.05
VPS13A-203ENST00000360280 ZNF547Q8IVP9 402 aa8.47□□□□□ -1.05
VPS13A-203ENST00000360280 TUSC5Q8IXB3 177 aa8.47□□□□□ -1.05
VPS13A-203ENST00000360280 LILRB1Q8NHL6 650 aaPredicted RBP8.47□□□□□ -1.05
VPS13A-203ENST00000360280 CLEC2DQ9UHP7 191 aa8.47□□□□□ -1.05
VPS13A-203ENST00000360280 MMP15P51511 669 aa8.47□□□□□ -1.05
VPS13A-203ENST00000360280 TMEM241Q24JQ0 296 aa8.47□□□□□ -1.05
VPS13A-203ENST00000360280 COPS9Q8WXC6 57 aa8.47□□□□□ -1.05
VPS13A-203ENST00000360280 ATOH8Q96SQ7 321 aa8.47□□□□□ -1.05
VPS13A-203ENST00000360280 FKBP11Q9NYL4 201 aa8.47□□□□□ -1.05
VPS13A-203ENST00000360280 H0YGG7 62 aa8.47□□□□□ -1.05
VPS13A-203ENST00000360280 OPN1MWP04001 364 aa8.47□□□□□ -1.05
VPS13A-203ENST00000360280 OPN1MW2P0DN77 364 aa8.47□□□□□ -1.05
VPS13A-203ENST00000360280 OPN1MW3P0DN78 364 aa8.47□□□□□ -1.05
VPS13A-203ENST00000360280 DGCR2P98153 550 aa8.47□□□□□ -1.05
VPS13A-203ENST00000360280 TMEM25Q86YD3 366 aa8.47□□□□□ -1.05
VPS13A-203ENST00000360280 RAB24Q969Q5 203 aa8.47□□□□□ -1.05
VPS13A-203ENST00000360280 FAM210BQ96KR6 192 aa8.47□□□□□ -1.05
VPS13A-203ENST00000360280 C19orf43Q9BQ61 176 aa8.47□□□□□ -1.05
VPS13A-203ENST00000360280 LSM2Q9Y333 95 aaKnown RBP8.47□□□□□ -1.05
VPS13A-203ENST00000360280 M0R135 149 aa8.46□□□□□ -1.05
VPS13A-203ENST00000360280 KLF7O75840 302 aaPredicted RBP8.46□□□□□ -1.05
VPS13A-203ENST00000360280 IL5P05113 134 aa8.46□□□□□ -1.05
VPS13A-203ENST00000360280 TM4SF1P30408 202 aa8.46□□□□□ -1.05
VPS13A-203ENST00000360280 PIGAP37287 484 aa8.46□□□□□ -1.05
VPS13A-203ENST00000360280 TMEM37Q8WXS4 190 aa8.46□□□□□ -1.05
VPS13A-203ENST00000360280 NTNG2Q96CW9 530 aa8.46□□□□□ -1.05
VPS13A-203ENST00000360280 ZNF799Q96GE5 643 aa8.46□□□□□ -1.05
VPS13A-203ENST00000360280 EGLN2Q96KS0 407 aa8.46□□□□□ -1.05
VPS13A-203ENST00000360280 HSPB8Q9UJY1 196 aa8.46□□□□□ -1.05
VPS13A-203ENST00000360280 MEIKINA0A087WXM9 373 aa8.46□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms