RNA–Protein interactions for RNA: ENST00000359867.7

CSNK1E-201, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK1E, Length 2,642 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-201ENST00000359867 SPARCP09486 303 aa12.29□□□□□ -0.44
CSNK1E-201ENST00000359867 ZNF823P16415 610 aa12.29□□□□□ -0.44
CSNK1E-201ENST00000359867 ZNF17P17021 662 aa12.29□□□□□ -0.44
CSNK1E-201ENST00000359867 VEGFCP49767 419 aa12.29□□□□□ -0.44
CSNK1E-201ENST00000359867 BIDP55957 195 aa12.29□□□□□ -0.44
CSNK1E-201ENST00000359867 MEP1BQ16820 701 aa12.29□□□□□ -0.44
CSNK1E-201ENST00000359867 TMEM176BQ3YBM2 270 aaPredicted RBP12.29□□□□□ -0.44
CSNK1E-201ENST00000359867 CLRN3Q8NCR9 226 aa12.29□□□□□ -0.44
CSNK1E-201ENST00000359867 SLC26A10Q8NG04 563 aa12.29□□□□□ -0.44
CSNK1E-201ENST00000359867 OR5M1Q8NGP8 315 aa12.29□□□□□ -0.44
CSNK1E-201ENST00000359867 RNF128Q8TEB7 428 aa12.29□□□□□ -0.44
CSNK1E-201ENST00000359867 HAS2Q92819 552 aa12.29□□□□□ -0.44
CSNK1E-201ENST00000359867 WDR89Q96FK6 387 aaPredicted RBP12.29□□□□□ -0.44
CSNK1E-201ENST00000359867 CMTM3Q96MX0 182 aa12.29□□□□□ -0.44
CSNK1E-201ENST00000359867 MRPL13Q9BYD1 178 aaKnown RBP12.29□□□□□ -0.44
CSNK1E-201ENST00000359867 ELOVL3Q9HB03 270 aa12.29□□□□□ -0.44
CSNK1E-201ENST00000359867 MED29Q9NX70 200 aa12.29□□□□□ -0.44
CSNK1E-201ENST00000359867 PIN1P1O15428 100 aa12.28□□□□□ -0.44
CSNK1E-201ENST00000359867 RPS27P42677 84 aaKnown RBP12.28□□□□□ -0.44
CSNK1E-201ENST00000359867 MMP15P51511 669 aa12.28□□□□□ -0.44
CSNK1E-201ENST00000359867 SGCAQ16586 387 aa12.28□□□□□ -0.44
CSNK1E-201ENST00000359867 THEM4Q5T1C6 240 aa12.28□□□□□ -0.44
CSNK1E-201ENST00000359867 METTL11BQ5VVY1 283 aa12.28□□□□□ -0.44
CSNK1E-201ENST00000359867 TMPPEQ6ZT21 453 aa12.28□□□□□ -0.44
CSNK1E-201ENST00000359867 BTN2A1Q7KYR7 527 aa12.28□□□□□ -0.44
CSNK1E-201ENST00000359867 CMTM4Q8IZR5 234 aa12.28□□□□□ -0.44
CSNK1E-201ENST00000359867 ZNF433Q8N7K0 673 aaPredicted RBP12.28□□□□□ -0.44
CSNK1E-201ENST00000359867 AMELYQ99218 206 aa12.28□□□□□ -0.44
CSNK1E-201ENST00000359867 ACACBO00763 2458 aa12.28□□□□□ -0.44
CSNK1E-201ENST00000359867 A0A1W2PNR3 127 aa12.28□□□□□ -0.44
CSNK1E-201ENST00000359867 AQP7P3A6NL99 342 aa12.28□□□□□ -0.44
CSNK1E-201ENST00000359867 G3V3Q6 166 aa12.28□□□□□ -0.44
CSNK1E-201ENST00000359867 DNASE2O00115 360 aaPredicted RBP12.28□□□□□ -0.44
CSNK1E-201ENST00000359867 IFNA7P01567 189 aa12.28□□□□□ -0.44
CSNK1E-201ENST00000359867 RFPL3SP0C7P2 107 aa12.28□□□□□ -0.44
CSNK1E-201ENST00000359867 TNFSF10P50591 281 aa12.28□□□□□ -0.44
CSNK1E-201ENST00000359867 KLF9Q13886 244 aaPredicted RBP12.28□□□□□ -0.44
CSNK1E-201ENST00000359867 EIF2B1Q14232 305 aaKnown RBP12.28□□□□□ -0.44
CSNK1E-201ENST00000359867 KRT77Q7Z794 578 aa12.28□□□□□ -0.44
CSNK1E-201ENST00000359867 SULF2Q8IWU5 870 aa12.28□□□□□ -0.44
CSNK1E-201ENST00000359867 OR4D10Q8NGI6 311 aa12.28□□□□□ -0.44
CSNK1E-201ENST00000359867 C4orf45Q96LM5 186 aa12.28□□□□□ -0.44
CSNK1E-201ENST00000359867 ABHD6Q9BV23 337 aa12.28□□□□□ -0.44
CSNK1E-201ENST00000359867 SLITRK2Q9H156 845 aa12.28□□□□□ -0.44
CSNK1E-201ENST00000359867 TMEM185BQ9H7F4 350 aa12.28□□□□□ -0.44
CSNK1E-201ENST00000359867 DKKL1Q9UK85 242 aa12.28□□□□□ -0.44
CSNK1E-201ENST00000359867 TRBV23-1A0A0A0MS06 115 aa12.27□□□□□ -0.44
CSNK1E-201ENST00000359867 MFSD2BA6NFX1 497 aa12.27□□□□□ -0.44
CSNK1E-201ENST00000359867 LRRC3CA6NJW4 275 aa12.27□□□□□ -0.44
CSNK1E-201ENST00000359867 ACOD1A6NK06 481 aa12.27□□□□□ -0.44
CSNK1E-201ENST00000359867 FAM74A7A6NL05 159 aa12.27□□□□□ -0.44
CSNK1E-201ENST00000359867 SULT2B1O00204 365 aa12.27□□□□□ -0.44
CSNK1E-201ENST00000359867 ZIC3O60481 467 aa12.27□□□□□ -0.44
CSNK1E-201ENST00000359867 SP1P08047 785 aa12.27□□□□□ -0.44
CSNK1E-201ENST00000359867 TSPAN5P62079 268 aa12.27□□□□□ -0.44
CSNK1E-201ENST00000359867 TBR1Q16650 682 aa12.27□□□□□ -0.44
CSNK1E-201ENST00000359867 FAM74A3Q4VXF1 159 aa12.27□□□□□ -0.44
CSNK1E-201ENST00000359867 TMEM225Q6GV28 225 aa12.27□□□□□ -0.44
CSNK1E-201ENST00000359867 ZNF676Q8N7Q3 588 aa12.27□□□□□ -0.44
CSNK1E-201ENST00000359867 OR2M7Q8NG81 312 aa12.27□□□□□ -0.44
CSNK1E-201ENST00000359867 OR52N5Q8NH56 324 aa12.27□□□□□ -0.44
CSNK1E-201ENST00000359867 OR6X1Q8NH79 312 aa12.27□□□□□ -0.44
CSNK1E-201ENST00000359867 SLC25A44Q96H78 314 aaPredicted RBP12.27□□□□□ -0.44
CSNK1E-201ENST00000359867 FOXN4Q96NZ1 517 aa12.27□□□□□ -0.44
CSNK1E-201ENST00000359867 ZNF436Q9C0F3 470 aaPredicted RBP12.27□□□□□ -0.44
CSNK1E-201ENST00000359867 ING1Q9UK53 422 aaPredicted RBP12.27□□□□□ -0.44
CSNK1E-201ENST00000359867 BSNQ9UPA5 3926 aa12.27□□□□□ -0.45
CSNK1E-201ENST00000359867 H3BSH0 61 aa12.27□□□□□ -0.45
CSNK1E-201ENST00000359867 ARPC1BO15143 372 aaKnown RBP12.27□□□□□ -0.45
CSNK1E-201ENST00000359867 CNR1P21554 472 aa12.27□□□□□ -0.45
CSNK1E-201ENST00000359867 SFTPDP35247 375 aa12.27□□□□□ -0.45
CSNK1E-201ENST00000359867 RIDAP52758 137 aaKnown RBP12.27□□□□□ -0.45
CSNK1E-201ENST00000359867 RAB14P61106 215 aa12.27□□□□□ -0.45
CSNK1E-201ENST00000359867 PITPNAQ00169 270 aa12.27□□□□□ -0.45
CSNK1E-201ENST00000359867 TOMM20Q15388 145 aa12.27□□□□□ -0.45
CSNK1E-201ENST00000359867 ZNF766Q5HY98 468 aa12.27□□□□□ -0.45
CSNK1E-201ENST00000359867 SLC25A25Q6KCM7 469 aa12.27□□□□□ -0.45
CSNK1E-201ENST00000359867 DEGS2Q6QHC5 323 aa12.27□□□□□ -0.45
CSNK1E-201ENST00000359867 IGFL2Q6UWQ7 119 aa12.27□□□□□ -0.45
CSNK1E-201ENST00000359867 LRRN1Q6UXK5 716 aa12.27□□□□□ -0.45
CSNK1E-201ENST00000359867 GLB1L2Q8IW92 636 aa12.27□□□□□ -0.45
CSNK1E-201ENST00000359867 PRSS35Q8N3Z0 413 aa12.27□□□□□ -0.45
CSNK1E-201ENST00000359867 GPR148Q8TDV2 347 aa12.27□□□□□ -0.45
CSNK1E-201ENST00000359867 CXorf58Q96LI9 332 aa12.27□□□□□ -0.45
CSNK1E-201ENST00000359867 MRI1Q9BV20 369 aa12.27□□□□□ -0.45
CSNK1E-201ENST00000359867 SPATA2Q9UM82 520 aa12.27□□□□□ -0.45
CSNK1E-201ENST00000359867 TRAF3IP2O43734 574 aaPredicted RBP12.26□□□□□ -0.45
CSNK1E-201ENST00000359867 EIF1BO60739 113 aaKnown RBP12.26□□□□□ -0.45
CSNK1E-201ENST00000359867 RGS11O94810 467 aa12.26□□□□□ -0.45
CSNK1E-201ENST00000359867 IGHG1P01857 330 aa12.26□□□□□ -0.45
CSNK1E-201ENST00000359867 ALDOBP05062 364 aa12.26□□□□□ -0.45
CSNK1E-201ENST00000359867 FABP1P07148 127 aa12.26□□□□□ -0.45
CSNK1E-201ENST00000359867 UCNP55089 124 aa12.26□□□□□ -0.45
CSNK1E-201ENST00000359867 FMODQ06828 376 aa12.26□□□□□ -0.45
CSNK1E-201ENST00000359867 FOXO1Q12778 655 aa12.26□□□□□ -0.45
CSNK1E-201ENST00000359867 WDFY1Q8IWB7 410 aa12.26□□□□□ -0.45
CSNK1E-201ENST00000359867 OR52I2Q8NH67 350 aa12.26□□□□□ -0.45
CSNK1E-201ENST00000359867 NANPQ8TBE9 248 aa12.26□□□□□ -0.45
CSNK1E-201ENST00000359867 PIGQQ9BRB3 760 aa12.26□□□□□ -0.45
CSNK1E-201ENST00000359867 GSX2Q9BZM3 304 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms