RNA–Protein interactions for RNA: ENST00000359082.3

SHANK1-202, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 5 BASIC

Gene SHANK1, Length 6,459 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-202ENST00000359082 VAMP5O95183 116 aa16.65■□□□□ 0.26
SHANK1-202ENST00000359082 CRYAAP02489 173 aa16.65■□□□□ 0.26
SHANK1-202ENST00000359082 MYF5P13349 255 aa16.65■□□□□ 0.26
SHANK1-202ENST00000359082 ISL1P61371 349 aa16.65■□□□□ 0.26
SHANK1-202ENST00000359082 ZNF425Q6IV72 752 aa16.65■□□□□ 0.26
SHANK1-202ENST00000359082 C16orf52Q8NHV5 167 aa16.65■□□□□ 0.26
SHANK1-202ENST00000359082 SLC25A32Q9H2D1 315 aa16.65■□□□□ 0.26
SHANK1-202ENST00000359082 RAF1P04049 648 aa16.65■□□□□ 0.26
SHANK1-202ENST00000359082 TRAPPC2P0DI81 140 aa16.65■□□□□ 0.26
SHANK1-202ENST00000359082 TRAPPC2BP0DI82 140 aa16.65■□□□□ 0.26
SHANK1-202ENST00000359082 RD3LP0DJH9 198 aa16.65■□□□□ 0.26
SHANK1-202ENST00000359082 ASAH1Q13510 395 aa16.65■□□□□ 0.26
SHANK1-202ENST00000359082 PCK2Q16822 640 aa16.65■□□□□ 0.26
SHANK1-202ENST00000359082 EXD3Q8N9H8 876 aa16.65■□□□□ 0.26
SHANK1-202ENST00000359082 GPR119Q8TDV5 335 aa16.65■□□□□ 0.26
SHANK1-202ENST00000359082 GABARAPL3Q9BY60 117 aa16.65■□□□□ 0.26
SHANK1-202ENST00000359082 AUNIPQ9H7T9 357 aa16.65■□□□□ 0.26
SHANK1-202ENST00000359082 TERTO14746 1132 aaKnown RBP16.65■□□□□ 0.26
SHANK1-202ENST00000359082 AQP8O94778 261 aa16.65■□□□□ 0.26
SHANK1-202ENST00000359082 GPM6AP51674 278 aa16.65■□□□□ 0.26
SHANK1-202ENST00000359082 ZNF121P58317 390 aaPredicted RBP16.65■□□□□ 0.26
SHANK1-202ENST00000359082 SHHQ15465 462 aa16.65■□□□□ 0.26
SHANK1-202ENST00000359082 OR52N5Q8NH56 324 aa16.65■□□□□ 0.26
SHANK1-202ENST00000359082 XKRY2A2RUG3 117 aa16.65■□□□□ 0.26
SHANK1-202ENST00000359082 SOCS7O14512 581 aa16.65■□□□□ 0.26
SHANK1-202ENST00000359082 OR4E1P0C645 316 aa16.65■□□□□ 0.26
SHANK1-202ENST00000359082 PMP22Q01453 160 aa16.65■□□□□ 0.26
SHANK1-202ENST00000359082 FABP5Q01469 135 aa16.65■□□□□ 0.26
SHANK1-202ENST00000359082 RELL2Q8NC24 303 aaPredicted RBP16.65■□□□□ 0.26
SHANK1-202ENST00000359082 OR52B4Q8NGK2 314 aa16.65■□□□□ 0.26
SHANK1-202ENST00000359082 C10orf90Q96M02 699 aa16.65■□□□□ 0.26
SHANK1-202ENST00000359082 SLCO1C1Q9NYB5 712 aa16.65■□□□□ 0.26
SHANK1-202ENST00000359082 AKR1C3P42330 323 aa16.64■□□□□ 0.26
SHANK1-202ENST00000359082 OR2B8PP59922 312 aa16.64■□□□□ 0.26
SHANK1-202ENST00000359082 PPP2CBP62714 309 aa16.64■□□□□ 0.26
SHANK1-202ENST00000359082 PPP2CAP67775 309 aa16.64■□□□□ 0.26
SHANK1-202ENST00000359082 STAC2Q6ZMT1 411 aa16.64■□□□□ 0.26
SHANK1-202ENST00000359082 WBP2Q969T9 261 aa16.64■□□□□ 0.26
SHANK1-202ENST00000359082 ORAI1Q96D31 301 aa16.64■□□□□ 0.26
SHANK1-202ENST00000359082 ONECUT1Q9UBC0 465 aa16.64■□□□□ 0.26
SHANK1-202ENST00000359082 NDRG3Q9UGV2 375 aa16.64■□□□□ 0.26
SHANK1-202ENST00000359082 CD3DP04234 171 aa16.64■□□□□ 0.25
SHANK1-202ENST00000359082 PSMB6P28072 239 aa16.64■□□□□ 0.25
SHANK1-202ENST00000359082 HOXC8P31273 242 aa16.64■□□□□ 0.25
SHANK1-202ENST00000359082 RPL13AP40429 203 aaKnown RBP16.64■□□□□ 0.25
SHANK1-202ENST00000359082 DIO1P49895 249 aa16.64■□□□□ 0.25
SHANK1-202ENST00000359082 TIGITQ495A1 244 aa16.64■□□□□ 0.25
SHANK1-202ENST00000359082 E5RGE8 158 aa16.64■□□□□ 0.25
SHANK1-202ENST00000359082 GFYI3L273 518 aa16.64■□□□□ 0.25
SHANK1-202ENST00000359082 SHBQ15464 509 aa16.64■□□□□ 0.25
SHANK1-202ENST00000359082 ZDHHC16Q969W1 377 aa16.64■□□□□ 0.25
SHANK1-202ENST00000359082 NSG2Q9Y328 171 aa16.64■□□□□ 0.25
SHANK1-202ENST00000359082 SLC25A4P12235 298 aa16.64■□□□□ 0.25
SHANK1-202ENST00000359082 SUMO1P63165 101 aaKnown RBP16.64■□□□□ 0.25
SHANK1-202ENST00000359082 LRRTM1Q86UE6 522 aa16.64■□□□□ 0.25
SHANK1-202ENST00000359082 RTN4RL1Q86UN2 441 aaPredicted RBP16.64■□□□□ 0.25
SHANK1-202ENST00000359082 LSRQ86X29 649 aaPredicted RBP16.64■□□□□ 0.25
SHANK1-202ENST00000359082 LHX4Q969G2 390 aa16.64■□□□□ 0.25
SHANK1-202ENST00000359082 GSX2Q9BZM3 304 aa16.64■□□□□ 0.25
SHANK1-202ENST00000359082 SLC22A20A6NK97 555 aa16.64■□□□□ 0.25
SHANK1-202ENST00000359082 NCBP2LA6PVI3 153 aaKnown RBP16.64■□□□□ 0.25
SHANK1-202ENST00000359082 RGPD1P0DJD0 1748 aa16.64■□□□□ 0.25
SHANK1-202ENST00000359082 HMGA1P17096 107 aaKnown RBP16.64■□□□□ 0.25
SHANK1-202ENST00000359082 C11orf42Q8N5U0 333 aa16.64■□□□□ 0.25
SHANK1-202ENST00000359082 OR5AP2Q8NGF4 316 aa16.64■□□□□ 0.25
SHANK1-202ENST00000359082 GPX8Q8TED1 209 aa16.64■□□□□ 0.25
SHANK1-202ENST00000359082 LRFN3Q9BTN0 628 aa16.64■□□□□ 0.25
SHANK1-202ENST00000359082 ZAR1LA6NP61 321 aa16.64■□□□□ 0.25
SHANK1-202ENST00000359082 MNX1P50219 401 aaPredicted RBP16.64■□□□□ 0.25
SHANK1-202ENST00000359082 BAK1Q16611 211 aa16.64■□□□□ 0.25
SHANK1-202ENST00000359082 CST9Q5W186 159 aa16.64■□□□□ 0.25
SHANK1-202ENST00000359082 H0YIG0 161 aa16.63■□□□□ 0.25
SHANK1-202ENST00000359082 FCMRO60667 390 aa16.63■□□□□ 0.25
SHANK1-202ENST00000359082 PPICP45877 212 aa16.63■□□□□ 0.25
SHANK1-202ENST00000359082 AGERQ15109 404 aa16.63■□□□□ 0.25
SHANK1-202ENST00000359082 CMBLQ96DG6 245 aa16.63■□□□□ 0.25
SHANK1-202ENST00000359082 ARHGDIGQ99819 225 aa16.63■□□□□ 0.25
SHANK1-202ENST00000359082 SLC25A37Q9NYZ2 338 aa16.63■□□□□ 0.25
SHANK1-202ENST00000359082 UBE2L5PA0A1B0GUS4 154 aa16.63■□□□□ 0.25
SHANK1-202ENST00000359082 DHODHQ02127 395 aa16.63■□□□□ 0.25
SHANK1-202ENST00000359082 FABP9Q0Z7S8 132 aa16.63■□□□□ 0.25
SHANK1-202ENST00000359082 C11orf91Q3C1V1 193 aa16.63■□□□□ 0.25
SHANK1-202ENST00000359082 PRSS36Q5K4E3 855 aa16.63■□□□□ 0.25
SHANK1-202ENST00000359082 AGBL4Q5VU57 503 aa16.63■□□□□ 0.25
SHANK1-202ENST00000359082 FAM26EQ8N5C1 309 aa16.63■□□□□ 0.25
SHANK1-202ENST00000359082 ASB1Q9Y576 335 aa16.63■□□□□ 0.25
SHANK1-202ENST00000359082 LOXHD1Q8IVV2 1947 aa16.63■□□□□ 0.25
SHANK1-202ENST00000359082 ZGLP1P0C6A0 271 aa16.63■□□□□ 0.25
SHANK1-202ENST00000359082 ST8SIA4Q92187 359 aa16.63■□□□□ 0.25
SHANK1-202ENST00000359082 CTDSP1Q9GZU7 261 aa16.63■□□□□ 0.25
SHANK1-202ENST00000359082 ARRDC1-AS1Q9H2J1 176 aa16.63■□□□□ 0.25
SHANK1-202ENST00000359082 GDF2Q9UK05 429 aaPredicted RBP16.63■□□□□ 0.25
SHANK1-202ENST00000359082 MPGP29372 298 aa16.63■□□□□ 0.25
SHANK1-202ENST00000359082 CLN3Q13286 438 aa16.63■□□□□ 0.25
SHANK1-202ENST00000359082 ELFN2Q5R3F8 820 aa16.63■□□□□ 0.25
SHANK1-202ENST00000359082 MOB3BQ86TA1 216 aa16.63■□□□□ 0.25
SHANK1-202ENST00000359082 TMEM174Q8WUU8 243 aa16.63■□□□□ 0.25
SHANK1-202ENST00000359082 SARAFQ96BY9 339 aa16.63■□□□□ 0.25
SHANK1-202ENST00000359082 OR8B4Q96RC9 309 aa16.63■□□□□ 0.25
SHANK1-202ENST00000359082 MICAL3Q7RTP6 2002 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms