RNA–Protein interactions for RNA: ENST00000358781.6

FAM3D-201, Transcript of family with sequence similarity 3 member D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FAM3D, Length 1,319 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3D-201ENST00000358781 RAB3IPQ96QF0 476 aaPredicted RBP14.41□□□□□ -0.1
FAM3D-201ENST00000358781 OR2V2Q96R30 315 aa14.41□□□□□ -0.1
FAM3D-201ENST00000358781 TEAD3Q99594 435 aa14.41□□□□□ -0.1
FAM3D-201ENST00000358781 RBM4BQ9BQ04 359 aaKnown RBP14.41□□□□□ -0.1
FAM3D-201ENST00000358781 TMEM100Q9NV29 134 aa14.41□□□□□ -0.1
FAM3D-201ENST00000358781 ZKSCAN7Q9P0L1 754 aaPredicted RBP14.41□□□□□ -0.1
FAM3D-201ENST00000358781 WIPI2Q9Y4P8 454 aa14.41□□□□□ -0.1
FAM3D-201ENST00000358781 TGFAP01135 160 aa14.41□□□□□ -0.1
FAM3D-201ENST00000358781 APOC1P02654 83 aa14.41□□□□□ -0.1
FAM3D-201ENST00000358781 LYNP07948 512 aa14.41□□□□□ -0.1
FAM3D-201ENST00000358781 TNFRSF1AP19438 455 aa14.41□□□□□ -0.1
FAM3D-201ENST00000358781 CDH15P55291 814 aa14.41□□□□□ -0.1
FAM3D-201ENST00000358781 LMO4P61968 165 aa14.41□□□□□ -0.1
FAM3D-201ENST00000358781 LCN1P1Q5VSP4 162 aa14.41□□□□□ -0.1
FAM3D-201ENST00000358781 SLC16A9Q7RTY1 509 aa14.41□□□□□ -0.1
FAM3D-201ENST00000358781 TCEANCQ8N8B7 351 aa14.41□□□□□ -0.1
FAM3D-201ENST00000358781 LINC01356Q8N9X3 169 aa14.41□□□□□ -0.1
FAM3D-201ENST00000358781 OR10AD1Q8NGE0 317 aa14.41□□□□□ -0.1
FAM3D-201ENST00000358781 OR2AE1Q8NHA4 323 aa14.41□□□□□ -0.1
FAM3D-201ENST00000358781 TMEM163Q8TC26 289 aa14.41□□□□□ -0.1
FAM3D-201ENST00000358781 THEM6Q8WUY1 208 aa14.41□□□□□ -0.1
FAM3D-201ENST00000358781 SPRYD4Q8WW59 207 aaPredicted RBP14.41□□□□□ -0.1
FAM3D-201ENST00000358781 RAB1CQ92928 201 aa14.41□□□□□ -0.1
FAM3D-201ENST00000358781 REPIN1Q9BWE0 567 aaKnown RBP14.41□□□□□ -0.1
FAM3D-201ENST00000358781 GABARAPL3Q9BY60 117 aa14.41□□□□□ -0.1
FAM3D-201ENST00000358781 TMEM160Q9NX00 188 aa14.41□□□□□ -0.1
FAM3D-201ENST00000358781 KLHDC2Q9Y2U9 406 aa14.41□□□□□ -0.1
FAM3D-201ENST00000358781 N6AMT1Q9Y5N5 214 aa14.41□□□□□ -0.1
FAM3D-201ENST00000358781 CD300LBA8K4G0 201 aa14.4□□□□□ -0.1
FAM3D-201ENST00000358781 H0YL77 283 aa14.4□□□□□ -0.1
FAM3D-201ENST00000358781 MLNRO43193 412 aa14.4□□□□□ -0.1
FAM3D-201ENST00000358781 LMX1BO60663 402 aa14.4□□□□□ -0.1
FAM3D-201ENST00000358781 ANXA2P07355 339 aaKnown RBP14.4□□□□□ -0.1
FAM3D-201ENST00000358781 H2BFMP0C1H6 154 aa14.4□□□□□ -0.1
FAM3D-201ENST00000358781 POLR2IP36954 125 aaKnown RBP14.4□□□□□ -0.1
FAM3D-201ENST00000358781 KRTAP21-3Q3LHN1 58 aa14.4□□□□□ -0.1
FAM3D-201ENST00000358781 PRSS45Q7RTY3 260 aa14.4□□□□□ -0.1
FAM3D-201ENST00000358781 BCDIN3DQ7Z5W3 292 aaKnown RBP14.4□□□□□ -0.1
FAM3D-201ENST00000358781 SPSB4Q96A44 273 aa14.4□□□□□ -0.1
FAM3D-201ENST00000358781 MEGF10Q96KG7 1140 aa14.4□□□□□ -0.1
FAM3D-201ENST00000358781 YIPF3Q9GZM5 350 aa14.4□□□□□ -0.1
FAM3D-201ENST00000358781 RIBC2Q9H4K1 309 aa14.4□□□□□ -0.1
FAM3D-201ENST00000358781 OPA3Q9H6K4 179 aa14.4□□□□□ -0.1
FAM3D-201ENST00000358781 SP140LQ9H930 580 aa14.4□□□□□ -0.1
FAM3D-201ENST00000358781 TMEM106BQ9NUM4 274 aa14.4□□□□□ -0.1
FAM3D-201ENST00000358781 DCAF16Q9NXF7 216 aa14.4□□□□□ -0.1
FAM3D-201ENST00000358781 LAMP5Q9UJQ1 280 aa14.4□□□□□ -0.1
FAM3D-201ENST00000358781 KCNS2Q9ULS6 477 aa14.4□□□□□ -0.1
FAM3D-201ENST00000358781 PPP1R3CQ9UQK1 317 aa14.4□□□□□ -0.1
FAM3D-201ENST00000358781 GGT3PA6NGU5 568 aa14.39□□□□□ -0.11
FAM3D-201ENST00000358781 XRCC2O43543 280 aa14.39□□□□□ -0.11
FAM3D-201ENST00000358781 ALOX5APP20292 161 aa14.39□□□□□ -0.11
FAM3D-201ENST00000358781 SRP9P49458 86 aaKnown RBP14.39□□□□□ -0.11
FAM3D-201ENST00000358781 HCCSP53701 268 aa14.39□□□□□ -0.11
FAM3D-201ENST00000358781 ZNF121P58317 390 aaPredicted RBP14.39□□□□□ -0.11
FAM3D-201ENST00000358781 HNRNPA0Q13151 305 aaKnown RBP14.39□□□□□ -0.11
FAM3D-201ENST00000358781 AADACL4Q5VUY2 407 aa14.39□□□□□ -0.11
FAM3D-201ENST00000358781 NXNL2Q5VZ03 156 aa14.39□□□□□ -0.11
FAM3D-201ENST00000358781 MEPCEQ7L2J0 689 aaKnown RBP14.39□□□□□ -0.11
FAM3D-201ENST00000358781 HIST2H2ABQ8IUE6 130 aaPredicted RBP14.39□□□□□ -0.11
FAM3D-201ENST00000358781 IL4I1Q96RQ9 567 aa14.39□□□□□ -0.11
FAM3D-201ENST00000358781 DNAJC27Q9NZQ0 273 aa14.39□□□□□ -0.11
FAM3D-201ENST00000358781 H2AFY2Q9P0M6 372 aaPredicted RBP14.39□□□□□ -0.11
FAM3D-201ENST00000358781 B4DSR2 109 aa14.38□□□□□ -0.11
FAM3D-201ENST00000358781 F5H5P2 479 aa14.38□□□□□ -0.11
FAM3D-201ENST00000358781 TBX1O43435 398 aa14.38□□□□□ -0.11
FAM3D-201ENST00000358781 HLA-DPB1P04440 258 aa14.38□□□□□ -0.11
FAM3D-201ENST00000358781 ALPLP05186 524 aa14.38□□□□□ -0.11
FAM3D-201ENST00000358781 MRPL3P09001 348 aaKnown RBP14.38□□□□□ -0.11
FAM3D-201ENST00000358781 LRRN1Q6UXK5 716 aa14.38□□□□□ -0.11
FAM3D-201ENST00000358781 FAM57BQ71RH2 274 aa14.38□□□□□ -0.11
FAM3D-201ENST00000358781 PEG10Q86TG7 708 aaKnown RBP14.38□□□□□ -0.11
FAM3D-201ENST00000358781 OR52H1Q8NGJ2 320 aa14.38□□□□□ -0.11
FAM3D-201ENST00000358781 CNN2Q99439 309 aaKnown RBP14.38□□□□□ -0.11
FAM3D-201ENST00000358781 SLC22A4Q9H015 551 aa14.38□□□□□ -0.11
FAM3D-201ENST00000358781 ZNF665Q9H7R5 613 aa14.38□□□□□ -0.11
FAM3D-201ENST00000358781 S100A14Q9HCY8 104 aa14.38□□□□□ -0.11
FAM3D-201ENST00000358781 GCM1Q9NP62 436 aa14.38□□□□□ -0.11
FAM3D-201ENST00000358781 USE1Q9NZ43 259 aa14.38□□□□□ -0.11
FAM3D-201ENST00000358781 CDC42EP3Q9UKI2 254 aa14.38□□□□□ -0.11
FAM3D-201ENST00000358781 NOP16Q9Y3C1 178 aaKnown RBP14.38□□□□□ -0.11
FAM3D-201ENST00000358781 NPTNQ9Y639 398 aa14.38□□□□□ -0.11
FAM3D-201ENST00000358781 SLC22A31A6NKX4 558 aa14.37□□□□□ -0.11
FAM3D-201ENST00000358781 FAM157AC9JC47 383 aa14.37□□□□□ -0.11
FAM3D-201ENST00000358781 IFNL4K9M1U5 179 aa14.37□□□□□ -0.11
FAM3D-201ENST00000358781 EI24O14681 340 aa14.37□□□□□ -0.11
FAM3D-201ENST00000358781 CA6P23280 308 aa14.37□□□□□ -0.11
FAM3D-201ENST00000358781 RBMXP38159 391 aaKnown RBP14.37□□□□□ -0.11
FAM3D-201ENST00000358781 MMP16P51512 607 aa14.37□□□□□ -0.11
FAM3D-201ENST00000358781 TIGD6Q17RP2 521 aa14.37□□□□□ -0.11
FAM3D-201ENST00000358781 CHRFAM7AQ494W8 412 aa14.37□□□□□ -0.11
FAM3D-201ENST00000358781 GID4Q8IVV7 300 aa14.37□□□□□ -0.11
FAM3D-201ENST00000358781 OR56B2PQ8NGI1 322 aa14.37□□□□□ -0.11
FAM3D-201ENST00000358781 SGK3Q96BR1 496 aa14.37□□□□□ -0.11
FAM3D-201ENST00000358781 REEP6Q96HR9 211 aa14.37□□□□□ -0.11
FAM3D-201ENST00000358781 OR10A2Q9H208 303 aa14.37□□□□□ -0.11
FAM3D-201ENST00000358781 NIPAL2Q9H841 368 aa14.37□□□□□ -0.11
FAM3D-201ENST00000358781 BRD7Q9NPI1 651 aa14.37□□□□□ -0.11
FAM3D-201ENST00000358781 MRPL15Q9P015 296 aaKnown RBP14.37□□□□□ -0.11
FAM3D-201ENST00000358781 ORC6Q9Y5N6 252 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms