RNA–Protein interactions for RNA: ENST00000358511.10

COL6A6-201, Transcript of collagen type VI alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL6A6, Length 9,581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6-201ENST00000358511 HTR5AP47898 357 aa7.99□□□□□ -1.13
COL6A6-201ENST00000358511 PNLIPRP3Q17RR3 467 aa7.99□□□□□ -1.13
COL6A6-201ENST00000358511 AWAT1Q58HT5 328 aa7.99□□□□□ -1.13
COL6A6-201ENST00000358511 RTP2Q5QGT7 225 aa7.99□□□□□ -1.13
COL6A6-201ENST00000358511 TMEM65Q6PI78 240 aa7.99□□□□□ -1.13
COL6A6-201ENST00000358511 DOK3Q7L591 496 aa7.99□□□□□ -1.13
COL6A6-201ENST00000358511 DEFB119Q8N690 84 aa7.99□□□□□ -1.13
COL6A6-201ENST00000358511 NUDT22Q9BRQ3 303 aa7.99□□□□□ -1.13
COL6A6-201ENST00000358511 RAB18Q9NP72 206 aa7.99□□□□□ -1.13
COL6A6-201ENST00000358511 CLDN34H7C241 214 aa7.99□□□□□ -1.13
COL6A6-201ENST00000358511 CT45A6P0DMU7 189 aa7.99□□□□□ -1.13
COL6A6-201ENST00000358511 CT45A5P0DMU8 189 aa7.99□□□□□ -1.13
COL6A6-201ENST00000358511 CT45A7P0DMV0 189 aa7.99□□□□□ -1.13
COL6A6-201ENST00000358511 CT45A8P0DMV1 189 aa7.99□□□□□ -1.13
COL6A6-201ENST00000358511 CT45A9P0DMV2 189 aa7.99□□□□□ -1.13
COL6A6-201ENST00000358511 HOXD9P28356 352 aaPredicted RBP7.99□□□□□ -1.13
COL6A6-201ENST00000358511 CT45A2Q5DJT8 189 aa7.99□□□□□ -1.13
COL6A6-201ENST00000358511 CT45A1Q5HYN5 189 aa7.99□□□□□ -1.13
COL6A6-201ENST00000358511 FAM109BQ6ICB4 259 aaPredicted RBP7.99□□□□□ -1.13
COL6A6-201ENST00000358511 SLC16A11Q8NCK7 471 aa7.99□□□□□ -1.13
COL6A6-201ENST00000358511 CT45A3Q8NHU0 189 aa7.99□□□□□ -1.13
COL6A6-201ENST00000358511 FOXJ1Q92949 421 aa7.99□□□□□ -1.13
COL6A6-201ENST00000358511 PBX4Q9BYU1 374 aa7.99□□□□□ -1.13
COL6A6-201ENST00000358511 BANF2Q9H503 90 aa7.99□□□□□ -1.13
COL6A6-201ENST00000358511 MPC2O95563 127 aa7.99□□□□□ -1.13
COL6A6-201ENST00000358511 HEXAP06865 529 aa7.99□□□□□ -1.13
COL6A6-201ENST00000358511 PTHLHP12272 177 aa7.99□□□□□ -1.13
COL6A6-201ENST00000358511 TMEM25Q86YD3 366 aa7.99□□□□□ -1.13
COL6A6-201ENST00000358511 CMBLQ96DG6 245 aa7.99□□□□□ -1.13
COL6A6-201ENST00000358511 TCTN2Q96GX1 697 aa7.99□□□□□ -1.13
COL6A6-201ENST00000358511 MEGF10Q96KG7 1140 aa7.99□□□□□ -1.13
COL6A6-201ENST00000358511 CHRDL1Q9BU40 450 aa7.99□□□□□ -1.13
COL6A6-201ENST00000358511 ULBP2Q9BZM5 246 aa7.99□□□□□ -1.13
COL6A6-201ENST00000358511 CTSAP10619 480 aa7.98□□□□□ -1.13
COL6A6-201ENST00000358511 SCAND1P57086 179 aa7.98□□□□□ -1.13
COL6A6-201ENST00000358511 MFAP5Q13361 173 aa7.98□□□□□ -1.13
COL6A6-201ENST00000358511 LGALSLQ3ZCW2 172 aaPredicted RBP7.98□□□□□ -1.13
COL6A6-201ENST00000358511 NKAIN4Q8IVV8 208 aa7.98□□□□□ -1.13
COL6A6-201ENST00000358511 SIRT6Q8N6T7 355 aa7.98□□□□□ -1.13
COL6A6-201ENST00000358511 TIMP2P16035 220 aa7.98□□□□□ -1.13
COL6A6-201ENST00000358511 Q6ZN92 141 aa7.98□□□□□ -1.13
COL6A6-201ENST00000358511 MED25Q71SY5 747 aa7.98□□□□□ -1.13
COL6A6-201ENST00000358511 THNSL2Q86YJ6 484 aa7.98□□□□□ -1.13
COL6A6-201ENST00000358511 ESRP2Q9H6T0 727 aaKnown RBP7.98□□□□□ -1.13
COL6A6-201ENST00000358511 HS3ST2Q9Y278 367 aa7.98□□□□□ -1.13
COL6A6-201ENST00000358511 GOLT1BQ9Y3E0 138 aa7.98□□□□□ -1.13
COL6A6-201ENST00000358511 TNFSF4P23510 183 aa7.98□□□□□ -1.13
COL6A6-201ENST00000358511 TGFBR3Q03167 851 aa7.98□□□□□ -1.13
COL6A6-201ENST00000358511 ZNF765Q7L2R6 523 aa7.98□□□□□ -1.13
COL6A6-201ENST00000358511 GRINAQ7Z429 371 aa7.98□□□□□ -1.13
COL6A6-201ENST00000358511 GJC3Q8NFK1 279 aa7.98□□□□□ -1.13
COL6A6-201ENST00000358511 THOC3Q96J01 351 aaKnown RBP7.98□□□□□ -1.13
COL6A6-201ENST00000358511 PRR14Q9BWN1 585 aa7.98□□□□□ -1.13
COL6A6-201ENST00000358511 P2RY12Q9H244 342 aa7.98□□□□□ -1.13
COL6A6-201ENST00000358511 PLEKHB1Q9UF11 243 aaPredicted RBP7.98□□□□□ -1.13
COL6A6-201ENST00000358511 PLXNB2O15031 1838 aa7.98□□□□□ -1.13
COL6A6-201ENST00000358511 PLPP2O43688 288 aa7.98□□□□□ -1.13
COL6A6-201ENST00000358511 ENSAO43768 121 aaKnown RBP7.98□□□□□ -1.13
COL6A6-201ENST00000358511 DUS4LO95620 317 aaKnown RBP7.98□□□□□ -1.13
COL6A6-201ENST00000358511 HNRNPA1P09651 372 aaKnown RBP eCLIP7.98□□□□□ -1.13
COL6A6-201ENST00000358511 TIPARPQ7Z3E1 657 aaKnown RBP7.98□□□□□ -1.13
COL6A6-201ENST00000358511 ZNF383Q8NA42 475 aa7.98□□□□□ -1.13
COL6A6-201ENST00000358511 DPH3P1Q9H4G8 78 aa7.98□□□□□ -1.13
COL6A6-201ENST00000358511 HEYLQ9NQ87 328 aaPredicted RBP7.98□□□□□ -1.13
COL6A6-201ENST00000358511 CADP27708 2225 aa7.98□□□□□ -1.13
COL6A6-201ENST00000358511 IGLV3-10A0A075B6K4 115 aa7.98□□□□□ -1.13
COL6A6-201ENST00000358511 SOCS7O14512 581 aa7.98□□□□□ -1.13
COL6A6-201ENST00000358511 DSCR3O14972 297 aa7.98□□□□□ -1.13
COL6A6-201ENST00000358511 OR10J4P0C629 311 aa7.98□□□□□ -1.13
COL6A6-201ENST00000358511 LIMS3P0CW19 117 aa7.98□□□□□ -1.13
COL6A6-201ENST00000358511 LIMS4P0CW20 117 aa7.98□□□□□ -1.13
COL6A6-201ENST00000358511 GSK3AP49840 483 aa7.98□□□□□ -1.13
COL6A6-201ENST00000358511 RAB38P57729 211 aa7.98□□□□□ -1.13
COL6A6-201ENST00000358511 DUSP8Q13202 625 aa7.98□□□□□ -1.13
COL6A6-201ENST00000358511 INPP5JQ15735 1006 aaPredicted RBP7.98□□□□□ -1.13
COL6A6-201ENST00000358511 MRM1Q6IN84 353 aaKnown RBP7.98□□□□□ -1.13
COL6A6-201ENST00000358511 DGAT2L6Q6ZPD8 337 aa7.98□□□□□ -1.13
COL6A6-201ENST00000358511 SMIM12Q96EX1 92 aa7.98□□□□□ -1.13
COL6A6-201ENST00000358511 STARD5Q9NSY2 213 aa7.98□□□□□ -1.13
COL6A6-201ENST00000358511 ZBTB42B2RXF5 422 aa7.98□□□□□ -1.13
COL6A6-201ENST00000358511 CXCL3P19876 107 aa7.98□□□□□ -1.13
COL6A6-201ENST00000358511 CLDN2P57739 230 aa7.98□□□□□ -1.13
COL6A6-201ENST00000358511 ERVFC1-1P60608 527 aa7.98□□□□□ -1.13
COL6A6-201ENST00000358511 SLC35G3Q8N808 338 aa7.98□□□□□ -1.13
COL6A6-201ENST00000358511 Q96M85 177 aa7.98□□□□□ -1.13
COL6A6-201ENST00000358511 SLC2A9Q9NRM0 540 aa7.98□□□□□ -1.13
COL6A6-201ENST00000358511 B4DEV8 164 aa7.98□□□□□ -1.13
COL6A6-201ENST00000358511 SULT1A1P50225 295 aa7.98□□□□□ -1.13
COL6A6-201ENST00000358511 ARHGEF39Q8N4T4 335 aa7.98□□□□□ -1.13
COL6A6-201ENST00000358511 GNG12Q9UBI6 72 aa7.98□□□□□ -1.13
COL6A6-201ENST00000358511 SDK2Q58EX2 2172 aa7.98□□□□□ -1.13
COL6A6-201ENST00000358511 TARM1B6A8C7 271 aa7.97□□□□□ -1.13
COL6A6-201ENST00000358511 ABHD16AO95870 558 aa7.97□□□□□ -1.13
COL6A6-201ENST00000358511 NPPBP16860 134 aa7.97□□□□□ -1.13
COL6A6-201ENST00000358511 HNRNPA1L2Q32P51 320 aaKnown RBP7.97□□□□□ -1.13
COL6A6-201ENST00000358511 MAMSTRQ6ZN01 415 aa7.97□□□□□ -1.13
COL6A6-201ENST00000358511 OR5B3Q8NH48 314 aa7.97□□□□□ -1.13
COL6A6-201ENST00000358511 CIB3Q96Q77 187 aaPredicted RBP7.97□□□□□ -1.13
COL6A6-201ENST00000358511 KLF16Q9BXK1 252 aaPredicted RBP7.97□□□□□ -1.13
COL6A6-201ENST00000358511 LRP5O75197 1615 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms