RNA–Protein interactions for RNA: ENST00000354513.9

PDGFA-201, Transcript of platelet derived growth factor subunit A, humanhuman

TSL 1 (best) BASIC

Gene PDGFA, Length 1,308 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFA-201ENST00000354513 OR52J3Q8NH60 311 aa13.21□□□□□ -0.29
PDGFA-201ENST00000354513 FANK1Q8TC84 345 aa13.21□□□□□ -0.29
PDGFA-201ENST00000354513 Q8TCH9 128 aa13.21□□□□□ -0.29
PDGFA-201ENST00000354513 ERMAPQ96PL5 475 aaPredicted RBP13.21□□□□□ -0.29
PDGFA-201ENST00000354513 PRDM13Q9H4Q3 707 aa13.21□□□□□ -0.29
PDGFA-201ENST00000354513 MRPL22Q9NWU5 206 aaKnown RBP13.21□□□□□ -0.29
PDGFA-201ENST00000354513 VWFP04275 2813 aa13.21□□□□□ -0.29
PDGFA-201ENST00000354513 TCRBV5S2A0A599 114 aa13.2□□□□□ -0.3
PDGFA-201ENST00000354513 OR6C68A6NDL8 312 aa13.2□□□□□ -0.3
PDGFA-201ENST00000354513 ANKRD65E5RJM6 399 aa13.2□□□□□ -0.3
PDGFA-201ENST00000354513 FAM20BO75063 409 aa13.2□□□□□ -0.3
PDGFA-201ENST00000354513 FPR3P25089 353 aa13.2□□□□□ -0.3
PDGFA-201ENST00000354513 CRABP1P29762 137 aa13.2□□□□□ -0.3
PDGFA-201ENST00000354513 PSMB10P40306 273 aa13.2□□□□□ -0.3
PDGFA-201ENST00000354513 CD200P41217 278 aa13.2□□□□□ -0.3
PDGFA-201ENST00000354513 PITPNBP48739 271 aa13.2□□□□□ -0.3
PDGFA-201ENST00000354513 CENPAP49450 140 aa13.2□□□□□ -0.3
PDGFA-201ENST00000354513 MPPED2Q15777 294 aa13.2□□□□□ -0.3
PDGFA-201ENST00000354513 DEFB112Q30KQ8 113 aa13.2□□□□□ -0.3
PDGFA-201ENST00000354513 RFX4Q33E94 735 aa13.2□□□□□ -0.3
PDGFA-201ENST00000354513 WDR25Q64LD2 544 aaPredicted RBP13.2□□□□□ -0.3
PDGFA-201ENST00000354513 SPATA24Q86W54 205 aa13.2□□□□□ -0.3
PDGFA-201ENST00000354513 OR4K13Q8NH42 304 aa13.2□□□□□ -0.3
PDGFA-201ENST00000354513 SLC25A28Q96A46 364 aa13.2□□□□□ -0.3
PDGFA-201ENST00000354513 PYURFQ96I23 114 aa13.2□□□□□ -0.3
PDGFA-201ENST00000354513 MAP6Q96JE9 813 aa13.2□□□□□ -0.3
PDGFA-201ENST00000354513 NUDT16L1Q9BRJ7 211 aaKnown RBP13.2□□□□□ -0.3
PDGFA-201ENST00000354513 SRA1Q9HD15 236 aaKnown RBP13.2□□□□□ -0.3
PDGFA-201ENST00000354513 CYB5R1Q9UHQ9 305 aa13.2□□□□□ -0.3
PDGFA-201ENST00000354513 AURKCQ9UQB9 309 aa13.2□□□□□ -0.3
PDGFA-201ENST00000354513 AQP12BA6NM10 295 aa13.19□□□□□ -0.3
PDGFA-201ENST00000354513 ARPC3O15145 178 aa13.19□□□□□ -0.3
PDGFA-201ENST00000354513 HOXA3O43365 443 aaPredicted RBP13.19□□□□□ -0.3
PDGFA-201ENST00000354513 OMGP23515 440 aa13.19□□□□□ -0.3
PDGFA-201ENST00000354513 FGF12P61328 243 aa13.19□□□□□ -0.3
PDGFA-201ENST00000354513 IL13RA1P78552 427 aa13.19□□□□□ -0.3
PDGFA-201ENST00000354513 RUSC1-AS1Q66K80 236 aa13.19□□□□□ -0.3
PDGFA-201ENST00000354513 DNM1P34Q6PK57 102 aa13.19□□□□□ -0.3
PDGFA-201ENST00000354513 BTNL3Q6UXE8 466 aa13.19□□□□□ -0.3
PDGFA-201ENST00000354513 DCDC5Q6ZRR9 648 aa13.19□□□□□ -0.3
PDGFA-201ENST00000354513 AQP12AQ8IXF9 295 aa13.19□□□□□ -0.3
PDGFA-201ENST00000354513 SDR9C7Q8NEX9 313 aa13.19□□□□□ -0.3
PDGFA-201ENST00000354513 OR8B3Q8NGG8 313 aa13.19□□□□□ -0.3
PDGFA-201ENST00000354513 ZNRF4Q8WWF5 429 aa13.19□□□□□ -0.3
PDGFA-201ENST00000354513 OR8B2Q96RD0 313 aa13.19□□□□□ -0.3
PDGFA-201ENST00000354513 ATF6BQ99941 703 aa13.19□□□□□ -0.3
PDGFA-201ENST00000354513 RPRD1BQ9NQG5 326 aaKnown RBP13.19□□□□□ -0.3
PDGFA-201ENST00000354513 TMEM100Q9NV29 134 aa13.19□□□□□ -0.3
PDGFA-201ENST00000354513 TMCC3Q9ULS5 477 aa13.19□□□□□ -0.3
PDGFA-201ENST00000354513 F5H5K5 113 aa13.18□□□□□ -0.3
PDGFA-201ENST00000354513 TNFRSF13BO14836 293 aaPredicted RBP13.18□□□□□ -0.3
PDGFA-201ENST00000354513 PTBP3O95758 552 aaKnown RBP13.18□□□□□ -0.3
PDGFA-201ENST00000354513 SFTPBP07988 381 aa13.18□□□□□ -0.3
PDGFA-201ENST00000354513 MMP9P14780 707 aa13.18□□□□□ -0.3
PDGFA-201ENST00000354513 RPS27P42677 84 aaKnown RBP13.18□□□□□ -0.3
PDGFA-201ENST00000354513 MTNR1AP48039 350 aa13.18□□□□□ -0.3
PDGFA-201ENST00000354513 GSSP48637 474 aa13.18□□□□□ -0.3
PDGFA-201ENST00000354513 RELBQ01201 579 aa13.18□□□□□ -0.3
PDGFA-201ENST00000354513 SRSF4Q08170 494 aaKnown RBP13.18□□□□□ -0.3
PDGFA-201ENST00000354513 SNAI3Q3KNW1 292 aa13.18□□□□□ -0.3
PDGFA-201ENST00000354513 LYPD4Q6UWN0 246 aa13.18□□□□□ -0.3
PDGFA-201ENST00000354513 TREML4Q6UXN2 200 aa13.18□□□□□ -0.3
PDGFA-201ENST00000354513 CELF2-AS1Q8N7Q2 184 aa13.18□□□□□ -0.3
PDGFA-201ENST00000354513 SLCO4A1Q96BD0 722 aa13.18□□□□□ -0.3
PDGFA-201ENST00000354513 TMIGD2Q96BF3 282 aa13.18□□□□□ -0.3
PDGFA-201ENST00000354513 DDOQ99489 341 aa13.18□□□□□ -0.3
PDGFA-201ENST00000354513 HCAR1Q9BXC0 346 aa13.18□□□□□ -0.3
PDGFA-201ENST00000354513 SLITRK2Q9H156 845 aa13.18□□□□□ -0.3
PDGFA-201ENST00000354513 UFSP2Q9NUQ7 469 aa13.18□□□□□ -0.3
PDGFA-201ENST00000354513 FAM32AQ9Y421 112 aaKnown RBP13.18□□□□□ -0.3
PDGFA-201ENST00000354513 TGP01266 2768 aa13.18□□□□□ -0.3
PDGFA-201ENST00000354513 PHYHO14832 338 aa13.17□□□□□ -0.3
PDGFA-201ENST00000354513 SLC6A6P31641 620 aa13.17□□□□□ -0.3
PDGFA-201ENST00000354513 FAM98BQ52LJ0 330 aaKnown RBP13.17□□□□□ -0.3
PDGFA-201ENST00000354513 ZNF620Q6ZNG0 422 aa13.17□□□□□ -0.3
PDGFA-201ENST00000354513 SPATC1Q76KD6 591 aa13.17□□□□□ -0.3
PDGFA-201ENST00000354513 C1orf87Q8N0U7 546 aa13.17□□□□□ -0.3
PDGFA-201ENST00000354513 PLEKHA8Q96JA3 519 aa13.17□□□□□ -0.3
PDGFA-201ENST00000354513 TBX15Q96SF7 602 aa13.17□□□□□ -0.3
PDGFA-201ENST00000354513 PITX2Q99697 317 aa13.17□□□□□ -0.3
PDGFA-201ENST00000354513 SMURF1Q9HCE7 757 aa13.17□□□□□ -0.3
PDGFA-201ENST00000354513 CLN8Q9UBY8 286 aa13.17□□□□□ -0.3
PDGFA-201ENST00000354513 MMP24Q9Y5R2 645 aa13.17□□□□□ -0.3
PDGFA-201ENST00000354513 TCRBV3S1A0A5B6 114 aa13.16□□□□□ -0.3
PDGFA-201ENST00000354513 DHRS12A0PJE2 317 aa13.16□□□□□ -0.3
PDGFA-201ENST00000354513 LRRC30A6NM36 301 aa13.16□□□□□ -0.3
PDGFA-201ENST00000354513 POM121CA8CG34 1229 aa13.16□□□□□ -0.3
PDGFA-201ENST00000354513 SRRM5B3KS81 715 aa13.16□□□□□ -0.3
PDGFA-201ENST00000354513 GADD45GO95257 159 aa13.16□□□□□ -0.3
PDGFA-201ENST00000354513 RENP00797 406 aa13.16□□□□□ -0.3
PDGFA-201ENST00000354513 LCATP04180 440 aa13.16□□□□□ -0.3
PDGFA-201ENST00000354513 CA6P23280 308 aa13.16□□□□□ -0.3
PDGFA-201ENST00000354513 OTX1P32242 354 aaPredicted RBP13.16□□□□□ -0.3
PDGFA-201ENST00000354513 PYCR1P32322 319 aa13.16□□□□□ -0.3
PDGFA-201ENST00000354513 CFHR2P36980 270 aa13.16□□□□□ -0.3
PDGFA-201ENST00000354513 SPIBQ01892 262 aa13.16□□□□□ -0.3
PDGFA-201ENST00000354513 ZNF92Q03936 586 aa13.16□□□□□ -0.3
PDGFA-201ENST00000354513 KPNB1Q14974 876 aaKnown RBP13.16□□□□□ -0.3
PDGFA-201ENST00000354513 C16orf87Q6PH81 154 aa13.16□□□□□ -0.3
PDGFA-201ENST00000354513 ADGRG5Q8IZF4 528 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms