RNA–Protein interactions for RNA: ENST00000354497.4

RTN3-204, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 1,407 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-204ENST00000354497 STPG2Q8N412 459 aa9.53□□□□□ -0.88
RTN3-204ENST00000354497 ATG16L2Q8NAA4 619 aa9.53□□□□□ -0.88
RTN3-204ENST00000354497 OR6M1Q8NGM8 313 aa9.53□□□□□ -0.88
RTN3-204ENST00000354497 AGR3Q8TD06 166 aa9.53□□□□□ -0.88
RTN3-204ENST00000354497 SNX33Q8WV41 574 aa9.53□□□□□ -0.88
RTN3-204ENST00000354497 IPCEF1Q8WWN9 437 aaPredicted RBP9.53□□□□□ -0.88
RTN3-204ENST00000354497 OIT3Q8WWZ8 545 aa9.53□□□□□ -0.88
RTN3-204ENST00000354497 UBE2FQ969M7 185 aa9.53□□□□□ -0.88
RTN3-204ENST00000354497 COQ8BQ96D53 544 aa9.53□□□□□ -0.88
RTN3-204ENST00000354497 TIMD4Q96H15 378 aa9.53□□□□□ -0.88
RTN3-204ENST00000354497 C1orf147Q96MC9 270 aaPredicted RBP9.53□□□□□ -0.88
RTN3-204ENST00000354497 FYTTD1Q96QD9 318 aaKnown RBP9.53□□□□□ -0.88
RTN3-204ENST00000354497 BTNL2Q9UIR0 455 aa9.53□□□□□ -0.88
RTN3-204ENST00000354497 DNAJC15Q9Y5T4 150 aa9.53□□□□□ -0.88
RTN3-204ENST00000354497 IGHV1-69-2A0A0G2JMI3 117 aa9.52□□□□□ -0.89
RTN3-204ENST00000354497 A8MVM7 634 aa9.52□□□□□ -0.89
RTN3-204ENST00000354497 EFCAB9A8MZ26 197 aa9.52□□□□□ -0.89
RTN3-204ENST00000354497 RPL36A-HNRNPH2H7BZ11 118 aa9.52□□□□□ -0.89
RTN3-204ENST00000354497 DNASE2O00115 360 aaPredicted RBP9.52□□□□□ -0.89
RTN3-204ENST00000354497 EI24O14681 340 aa9.52□□□□□ -0.89
RTN3-204ENST00000354497 LYPLA1O75608 230 aaPredicted RBP9.52□□□□□ -0.89
RTN3-204ENST00000354497 CPSF4O95639 269 aaKnown RBP9.52□□□□□ -0.89
RTN3-204ENST00000354497 GPANK1O95872 356 aa9.52□□□□□ -0.89
RTN3-204ENST00000354497 KNG1P01042 644 aa9.52□□□□□ -0.89
RTN3-204ENST00000354497 S100A9P06702 114 aaKnown RBP9.52□□□□□ -0.89
RTN3-204ENST00000354497 THRBP10828 461 aa9.52□□□□□ -0.89
RTN3-204ENST00000354497 ZNF43P17038 809 aa9.52□□□□□ -0.89
RTN3-204ENST00000354497 CHI3L1P36222 383 aaPredicted RBP9.52□□□□□ -0.89
RTN3-204ENST00000354497 TSTQ16762 297 aaKnown RBP9.52□□□□□ -0.89
RTN3-204ENST00000354497 RNF212Q495C1 297 aa9.52□□□□□ -0.89
RTN3-204ENST00000354497 DNLZQ5SXM8 178 aa9.52□□□□□ -0.89
RTN3-204ENST00000354497 C1orf140Q5VVS0 124 aa9.52□□□□□ -0.89
RTN3-204ENST00000354497 OR4F3Q6IEY1 312 aa9.52□□□□□ -0.89
RTN3-204ENST00000354497 ZCCHC23Q6ZST2 131 aa9.52□□□□□ -0.89
RTN3-204ENST00000354497 ZBTB46Q86UZ6 589 aa9.52□□□□□ -0.89
RTN3-204ENST00000354497 ST7LQ8TDW4 575 aa9.52□□□□□ -0.89
RTN3-204ENST00000354497 NSMAFQ92636 917 aa9.52□□□□□ -0.89
RTN3-204ENST00000354497 RAB1CQ92928 201 aa9.52□□□□□ -0.89
RTN3-204ENST00000354497 SIGLEC11Q96RL6 698 aa9.52□□□□□ -0.89
RTN3-204ENST00000354497 SLC30A2Q9BRI3 323 aa9.52□□□□□ -0.89
RTN3-204ENST00000354497 PTDSS2Q9BVG9 487 aa9.52□□□□□ -0.89
RTN3-204ENST00000354497 DPY30Q9C005 99 aa9.52□□□□□ -0.89
RTN3-204ENST00000354497 OR51B6Q9H340 312 aa9.52□□□□□ -0.89
RTN3-204ENST00000354497 HINT3Q9NQE9 182 aaKnown RBP9.52□□□□□ -0.89
RTN3-204ENST00000354497 DECR2Q9NUI1 292 aa9.52□□□□□ -0.89
RTN3-204ENST00000354497 PNPOQ9NVS9 261 aa9.52□□□□□ -0.89
RTN3-204ENST00000354497 PDP1Q9P0J1 537 aaPredicted RBP9.52□□□□□ -0.89
RTN3-204ENST00000354497 ASH2LQ9UBL3 628 aa9.52□□□□□ -0.89
RTN3-204ENST00000354497 NUFIP1Q9UHK0 495 aaKnown RBP9.52□□□□□ -0.89
RTN3-204ENST00000354497 OAZ3Q9UMX2 235 aa9.52□□□□□ -0.89
RTN3-204ENST00000354497 ING4Q9UNL4 249 aa9.52□□□□□ -0.89
RTN3-204ENST00000354497 HSPB11Q9Y547 144 aa9.52□□□□□ -0.89
RTN3-204ENST00000354497 PRORSD1PA6NEY8 169 aa9.51□□□□□ -0.89
RTN3-204ENST00000354497 C17orf100A8MU93 164 aa9.51□□□□□ -0.89
RTN3-204ENST00000354497 M0QZ24 198 aa9.51□□□□□ -0.89
RTN3-204ENST00000354497 SLC1A7O00341 560 aa9.51□□□□□ -0.89
RTN3-204ENST00000354497 INMTO95050 263 aa9.51□□□□□ -0.89
RTN3-204ENST00000354497 AHSA1O95433 338 aa9.51□□□□□ -0.89
RTN3-204ENST00000354497 LALBAP00709 142 aa9.51□□□□□ -0.89
RTN3-204ENST00000354497 HLA-DQB1P01920 261 aa9.51□□□□□ -0.89
RTN3-204ENST00000354497 GKN3PP0CG01 181 aa9.51□□□□□ -0.89
RTN3-204ENST00000354497 PNMTP11086 282 aa9.51□□□□□ -0.89
RTN3-204ENST00000354497 ZNF35P13682 527 aa9.51□□□□□ -0.89
RTN3-204ENST00000354497 IL7RP16871 459 aa9.51□□□□□ -0.89
RTN3-204ENST00000354497 PRPS1L1P21108 318 aa9.51□□□□□ -0.89
RTN3-204ENST00000354497 SOX6P35712 828 aa9.51□□□□□ -0.89
RTN3-204ENST00000354497 RIDAP52758 137 aaKnown RBP9.51□□□□□ -0.89
RTN3-204ENST00000354497 SELENOVP59797 346 aa9.51□□□□□ -0.89
RTN3-204ENST00000354497 BTG1P62324 171 aa9.51□□□□□ -0.89
RTN3-204ENST00000354497 GLO1Q04760 184 aa9.51□□□□□ -0.89
RTN3-204ENST00000354497 ZMYND11Q15326 602 aa9.51□□□□□ -0.89
RTN3-204ENST00000354497 KRBOX4Q5JUW0 171 aa9.51□□□□□ -0.89
RTN3-204ENST00000354497 MRPL2Q5T653 305 aaKnown RBP9.51□□□□□ -0.89
RTN3-204ENST00000354497 RGS7BPQ6MZT1 257 aaPredicted RBP9.51□□□□□ -0.89
RTN3-204ENST00000354497 ZNF813Q6ZN06 617 aa9.51□□□□□ -0.89
RTN3-204ENST00000354497 RNF165Q6ZSG1 346 aa9.51□□□□□ -0.89
RTN3-204ENST00000354497 ANKRD46Q86W74 232 aa9.51□□□□□ -0.89
RTN3-204ENST00000354497 CMIPQ8IY22 773 aa9.51□□□□□ -0.89
RTN3-204ENST00000354497 SETD9Q8NE22 299 aa9.51□□□□□ -0.89
RTN3-204ENST00000354497 TSPEARQ8WU66 669 aa9.51□□□□□ -0.89
RTN3-204ENST00000354497 C7orf34Q96L11 122 aa9.51□□□□□ -0.89
RTN3-204ENST00000354497 ZNF48Q96MX3 618 aaPredicted RBP9.51□□□□□ -0.89
RTN3-204ENST00000354497 PDCD10Q9BUL8 212 aa9.51□□□□□ -0.89
RTN3-204ENST00000354497 PAPOLGQ9BWT3 736 aaKnown RBP9.51□□□□□ -0.89
RTN3-204ENST00000354497 MS4A7Q9GZW8 240 aaPredicted RBP9.51□□□□□ -0.89
RTN3-204ENST00000354497 EMC7Q9NPA0 242 aa9.51□□□□□ -0.89
RTN3-204ENST00000354497 ADA2Q9NZK5 511 aa9.51□□□□□ -0.89
RTN3-204ENST00000354497 GPR160Q9UJ42 338 aa9.51□□□□□ -0.89
RTN3-204ENST00000354497 RCE1Q9Y256 329 aa9.51□□□□□ -0.89
RTN3-204ENST00000354497 POFUT2Q9Y2G5 429 aa9.51□□□□□ -0.89
RTN3-204ENST00000354497 MAB21L2Q9Y586 359 aa9.51□□□□□ -0.89
RTN3-204ENST00000354497 IGHV3OR16-10A0A075B7F0 116 aa9.5□□□□□ -0.89
RTN3-204ENST00000354497 SULT1C2O00338 296 aa9.5□□□□□ -0.89
RTN3-204ENST00000354497 SELENOFO60613 162 aa9.5□□□□□ -0.89
RTN3-204ENST00000354497 NDUFS6O75380 124 aaKnown RBP9.5□□□□□ -0.89
RTN3-204ENST00000354497 ALPLP05186 524 aa9.5□□□□□ -0.89
RTN3-204ENST00000354497 FGF2P09038 288 aa9.5□□□□□ -0.89
RTN3-204ENST00000354497 FAM157BP0CG42 384 aa9.5□□□□□ -0.89
RTN3-204ENST00000354497 B4GALT1P15291 398 aa9.5□□□□□ -0.89
RTN3-204ENST00000354497 ZNF14P17017 642 aaPredicted RBP9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms