RNA–Protein interactions for RNA: ENST00000352818.8

CD44-205, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-205ENST00000352818 SSX4O60224 188 aa7.2□□□□□ -1.26
CD44-205ENST00000352818 WNT11O96014 354 aa7.2□□□□□ -1.26
CD44-205ENST00000352818 PAHP00439 452 aa7.2□□□□□ -1.26
CD44-205ENST00000352818 FAM157BP0CG42 384 aa7.2□□□□□ -1.26
CD44-205ENST00000352818 UBCP0CG48 685 aaKnown RBP7.2□□□□□ -1.26
CD44-205ENST00000352818 SNRPBP14678 240 aaKnown RBP7.2□□□□□ -1.26
CD44-205ENST00000352818 ZNF43P17038 809 aa7.2□□□□□ -1.26
CD44-205ENST00000352818 IGFBP3P17936 291 aaPredicted RBP7.2□□□□□ -1.26
CD44-205ENST00000352818 ADRA2CP18825 462 aa7.2□□□□□ -1.26
CD44-205ENST00000352818 SFTPDP35247 375 aa7.2□□□□□ -1.26
CD44-205ENST00000352818 RPS27P42677 84 aaKnown RBP7.2□□□□□ -1.26
CD44-205ENST00000352818 RANBP1P43487 201 aa7.2□□□□□ -1.26
CD44-205ENST00000352818 MMP15P51511 669 aa7.2□□□□□ -1.26
CD44-205ENST00000352818 MMP16P51512 607 aa7.2□□□□□ -1.26
CD44-205ENST00000352818 SUCLG1P53597 346 aaKnown RBP7.2□□□□□ -1.26
CD44-205ENST00000352818 MFGE8Q08431 387 aaPredicted RBP7.2□□□□□ -1.26
CD44-205ENST00000352818 TOMM20Q15388 145 aa7.2□□□□□ -1.26
CD44-205ENST00000352818 TAB1Q15750 504 aa7.2□□□□□ -1.26
CD44-205ENST00000352818 CHRFAM7AQ494W8 412 aa7.2□□□□□ -1.26
CD44-205ENST00000352818 C10orf128Q5T292 105 aa7.2□□□□□ -1.26
CD44-205ENST00000352818 ZNF468Q5VIY5 522 aaPredicted RBP7.2□□□□□ -1.26
CD44-205ENST00000352818 RAET1LQ5VY80 246 aa7.2□□□□□ -1.26
CD44-205ENST00000352818 SPINK14Q6IE38 97 aa7.2□□□□□ -1.26
CD44-205ENST00000352818 OR7E24Q6IFN5 339 aa7.2□□□□□ -1.26
CD44-205ENST00000352818 ZNF704Q6ZNC4 412 aaPredicted RBP7.2□□□□□ -1.26
CD44-205ENST00000352818 DCXRQ7Z4W1 244 aa7.2□□□□□ -1.26
CD44-205ENST00000352818 MDGA2Q7Z553 956 aa7.2□□□□□ -1.26
CD44-205ENST00000352818 PNPLA5Q7Z6Z6 429 aaPredicted RBP7.2□□□□□ -1.26
CD44-205ENST00000352818 AKAP14Q86UN6 197 aa7.2□□□□□ -1.26
CD44-205ENST00000352818 UBQLNLQ8IYU4 475 aa7.2□□□□□ -1.26
CD44-205ENST00000352818 BEST3Q8N1M1 668 aa7.2□□□□□ -1.26
CD44-205ENST00000352818 CELF2-AS1Q8N7Q2 184 aa7.2□□□□□ -1.26
CD44-205ENST00000352818 OR4M2Q8NGB6 313 aa7.2□□□□□ -1.26
CD44-205ENST00000352818 OR5H6Q8NGV6 325 aa7.2□□□□□ -1.26
CD44-205ENST00000352818 ZNF671Q8TAW3 534 aa7.2□□□□□ -1.26
CD44-205ENST00000352818 LGALS14Q8TCE9 139 aa7.2□□□□□ -1.26
CD44-205ENST00000352818 C15orf40Q8WUR7 153 aa7.2□□□□□ -1.26
CD44-205ENST00000352818 C11orf40Q8WZ69 217 aa7.2□□□□□ -1.26
CD44-205ENST00000352818 TMEM106AQ96A25 262 aa7.2□□□□□ -1.26
CD44-205ENST00000352818 INTS12Q96CB8 462 aaKnown RBP7.2□□□□□ -1.26
CD44-205ENST00000352818 SLC25A38Q96DW6 304 aa7.2□□□□□ -1.26
CD44-205ENST00000352818 PERPQ96FX8 193 aa7.2□□□□□ -1.26
CD44-205ENST00000352818 C7orf50Q9BRJ6 194 aaKnown RBP7.2□□□□□ -1.26
CD44-205ENST00000352818 SF3B5Q9BWJ5 86 aaKnown RBP7.2□□□□□ -1.26
CD44-205ENST00000352818 NIPAL2Q9H841 368 aa7.2□□□□□ -1.26
CD44-205ENST00000352818 PLEKHA1Q9HB21 404 aa7.2□□□□□ -1.26
CD44-205ENST00000352818 G6PC2Q9NQR9 355 aa7.2□□□□□ -1.26
CD44-205ENST00000352818 FAM206AQ9NX38 181 aa7.2□□□□□ -1.26
CD44-205ENST00000352818 MALT1Q9UDY8 824 aa7.2□□□□□ -1.26
CD44-205ENST00000352818 CYB5R1Q9UHQ9 305 aa7.2□□□□□ -1.26
CD44-205ENST00000352818 ING1Q9UK53 422 aaPredicted RBP7.2□□□□□ -1.26
CD44-205ENST00000352818 AK6Q9Y3D8 172 aaKnown RBP7.2□□□□□ -1.26
CD44-205ENST00000352818 A0A1W2PPK0 400 aa7.19□□□□□ -1.26
CD44-205ENST00000352818 ANXA2P2A6NMY6 339 aa7.19□□□□□ -1.26
CD44-205ENST00000352818 ZNF726A6NNF4 738 aa7.19□□□□□ -1.26
CD44-205ENST00000352818 ZNF878C9JN71 531 aa7.19□□□□□ -1.26
CD44-205ENST00000352818 MPZL1O95297 269 aa7.19□□□□□ -1.26
CD44-205ENST00000352818 PNPP00491 289 aa7.19□□□□□ -1.26
CD44-205ENST00000352818 CD2P06729 351 aa7.19□□□□□ -1.26
CD44-205ENST00000352818 ANXA2P07355 339 aaKnown RBP7.19□□□□□ -1.26
CD44-205ENST00000352818 GLI4P10075 376 aa7.19□□□□□ -1.26
CD44-205ENST00000352818 CNR1P21554 472 aa7.19□□□□□ -1.26
CD44-205ENST00000352818 CYB561P49447 251 aa7.19□□□□□ -1.26
CD44-205ENST00000352818 CLDN20P56880 219 aa7.19□□□□□ -1.26
CD44-205ENST00000352818 RAC3P60763 192 aa7.19□□□□□ -1.26
CD44-205ENST00000352818 LSM6P62312 80 aaKnown RBP7.19□□□□□ -1.26
CD44-205ENST00000352818 MRPS10P82664 201 aaKnown RBP7.19□□□□□ -1.26
CD44-205ENST00000352818 TMEM244Q5VVB8 128 aa7.19□□□□□ -1.26
CD44-205ENST00000352818 TMEM225Q6GV28 225 aa7.19□□□□□ -1.26
CD44-205ENST00000352818 RTL6Q6ICC9 239 aa7.19□□□□□ -1.26
CD44-205ENST00000352818 SYT9Q86SS6 491 aa7.19□□□□□ -1.26
CD44-205ENST00000352818 ZNF227Q86WZ6 799 aa7.19□□□□□ -1.26
CD44-205ENST00000352818 OR5M1Q8NGP8 315 aa7.19□□□□□ -1.26
CD44-205ENST00000352818 OR10AC1Q8NH08 325 aa7.19□□□□□ -1.26
CD44-205ENST00000352818 ENKURQ8TC29 256 aa7.19□□□□□ -1.26
CD44-205ENST00000352818 SMIM4Q8WVI0 70 aa7.19□□□□□ -1.26
CD44-205ENST00000352818 TSEN15Q8WW01 171 aaKnown RBP7.19□□□□□ -1.26
CD44-205ENST00000352818 TMEM54Q969K7 222 aa7.19□□□□□ -1.26
CD44-205ENST00000352818 HAVCR1Q96D42 359 aa7.19□□□□□ -1.26
CD44-205ENST00000352818 FOXN4Q96NZ1 517 aa7.19□□□□□ -1.26
CD44-205ENST00000352818 GNRHR2Q96P88 292 aa7.19□□□□□ -1.26
CD44-205ENST00000352818 NEDD4LQ96PU5 975 aa7.19□□□□□ -1.26
CD44-205ENST00000352818 THAP7Q9BT49 309 aaPredicted RBP7.19□□□□□ -1.26
CD44-205ENST00000352818 TP63Q9H3D4 680 aaPredicted RBP7.19□□□□□ -1.26
CD44-205ENST00000352818 C1orf198Q9H425 327 aa7.19□□□□□ -1.26
CD44-205ENST00000352818 TMEM185BQ9H7F4 350 aa7.19□□□□□ -1.26
CD44-205ENST00000352818 RNF121Q9H920 327 aa7.19□□□□□ -1.26
CD44-205ENST00000352818 SLC17A5Q9NRA2 495 aa7.19□□□□□ -1.26
CD44-205ENST00000352818 ZNF275Q9NSD4 429 aaPredicted RBP7.19□□□□□ -1.26
CD44-205ENST00000352818 OR5V1Q9UGF6 321 aa7.19□□□□□ -1.26
CD44-205ENST00000352818 STEAP1Q9UHE8 339 aa7.19□□□□□ -1.26
CD44-205ENST00000352818 OR52A1Q9UKL2 312 aa7.19□□□□□ -1.26
CD44-205ENST00000352818 HHLA2Q9UM44 414 aa7.19□□□□□ -1.26
CD44-205ENST00000352818 DHDHQ9UQ10 334 aa7.19□□□□□ -1.26
CD44-205ENST00000352818 RCE1Q9Y256 329 aa7.19□□□□□ -1.26
CD44-205ENST00000352818 FAM215AQ9Y5M1 114 aa7.19□□□□□ -1.26
CD44-205ENST00000352818 DNAJC13O75165 2243 aa7.19□□□□□ -1.26
CD44-205ENST00000352818 FREM3P0C091 2139 aa7.18□□□□□ -1.26
CD44-205ENST00000352818 TRAV8-7A0A075B6U6 113 aa7.18□□□□□ -1.26
CD44-205ENST00000352818 A0A0B4J203 849 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms