RNA–Protein interactions for RNA: ENST00000347617.10

HMGA1-202, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,773 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-202ENST00000347617 NFYBP25208 207 aa14.17□□□□□ -0.14
HMGA1-202ENST00000347617 ADH6P28332 368 aa14.17□□□□□ -0.14
HMGA1-202ENST00000347617 AVPR2P30518 371 aa14.17□□□□□ -0.14
HMGA1-202ENST00000347617 GALNSP34059 522 aa14.17□□□□□ -0.14
HMGA1-202ENST00000347617 HSD11B2P80365 405 aa14.17□□□□□ -0.14
HMGA1-202ENST00000347617 RPL18Q07020 188 aaKnown RBP14.17□□□□□ -0.14
HMGA1-202ENST00000347617 OR7A5Q15622 319 aa14.17□□□□□ -0.14
HMGA1-202ENST00000347617 MEP1BQ16820 701 aa14.17□□□□□ -0.14
HMGA1-202ENST00000347617 BTNL8Q6UX41 500 aa14.17□□□□□ -0.14
HMGA1-202ENST00000347617 MDGA2Q7Z553 956 aa14.17□□□□□ -0.14
HMGA1-202ENST00000347617 HOGA1Q86XE5 327 aa14.17□□□□□ -0.14
HMGA1-202ENST00000347617 C1orf210Q8IVY1 113 aa14.17□□□□□ -0.14
HMGA1-202ENST00000347617 OR5T3Q8NGG3 340 aa14.17□□□□□ -0.14
HMGA1-202ENST00000347617 OR9A4Q8NGU2 314 aa14.17□□□□□ -0.14
HMGA1-202ENST00000347617 ARSGQ96EG1 525 aa14.17□□□□□ -0.14
HMGA1-202ENST00000347617 SLC25A44Q96H78 314 aaPredicted RBP14.17□□□□□ -0.14
HMGA1-202ENST00000347617 LPAR4Q99677 370 aa14.17□□□□□ -0.14
HMGA1-202ENST00000347617 STARD5Q9NSY2 213 aa14.17□□□□□ -0.14
HMGA1-202ENST00000347617 TAS2R4Q9NYW5 299 aa14.17□□□□□ -0.14
HMGA1-202ENST00000347617 FBLN5Q9UBX5 448 aa14.17□□□□□ -0.14
HMGA1-202ENST00000347617 GDF2Q9UK05 429 aaPredicted RBP14.17□□□□□ -0.14
HMGA1-202ENST00000347617 MEMO1Q9Y316 297 aa14.17□□□□□ -0.14
HMGA1-202ENST00000347617 TMED7Q9Y3B3 224 aa14.17□□□□□ -0.14
HMGA1-202ENST00000347617 CACNA1IQ9P0X4 2223 aa14.16□□□□□ -0.14
HMGA1-202ENST00000347617 TMEM235A6NFC5 223 aa14.16□□□□□ -0.14
HMGA1-202ENST00000347617 ZNF860A6NHJ4 632 aa14.16□□□□□ -0.14
HMGA1-202ENST00000347617 DCTN6O00399 190 aa14.16□□□□□ -0.14
HMGA1-202ENST00000347617 CLDN4O14493 209 aa14.16□□□□□ -0.14
HMGA1-202ENST00000347617 XKRYO14609 159 aa14.16□□□□□ -0.14
HMGA1-202ENST00000347617 OR2T1O43869 369 aa14.16□□□□□ -0.14
HMGA1-202ENST00000347617 HTR3BO95264 441 aa14.16□□□□□ -0.14
HMGA1-202ENST00000347617 BPNT1O95861 308 aa14.16□□□□□ -0.14
HMGA1-202ENST00000347617 FBP1P09467 338 aa14.16□□□□□ -0.14
HMGA1-202ENST00000347617 CD1CP29017 333 aa14.16□□□□□ -0.14
HMGA1-202ENST00000347617 EPHA8P29322 1005 aaPredicted RBP14.16□□□□□ -0.14
HMGA1-202ENST00000347617 GLP1RP43220 463 aa14.16□□□□□ -0.14
HMGA1-202ENST00000347617 GFERP55789 205 aa14.16□□□□□ -0.14
HMGA1-202ENST00000347617 OR1D5P58170 312 aa14.16□□□□□ -0.14
HMGA1-202ENST00000347617 SGCAQ16586 387 aa14.16□□□□□ -0.14
HMGA1-202ENST00000347617 KLHL26Q53HC5 615 aa14.16□□□□□ -0.14
HMGA1-202ENST00000347617 NSUN5P2Q63ZY6 315 aa14.16□□□□□ -0.14
HMGA1-202ENST00000347617 ASPHD2Q6ICH7 369 aa14.16□□□□□ -0.14
HMGA1-202ENST00000347617 RHOUQ7L0Q8 258 aa14.16□□□□□ -0.14
HMGA1-202ENST00000347617 SLC16A13Q7RTY0 426 aa14.16□□□□□ -0.14
HMGA1-202ENST00000347617 D2HGDHQ8N465 521 aa14.16□□□□□ -0.14
HMGA1-202ENST00000347617 ARRDC1Q8N5I2 433 aa14.16□□□□□ -0.14
HMGA1-202ENST00000347617 ZSCAN4Q8NAM6 433 aaPredicted RBP14.16□□□□□ -0.14
HMGA1-202ENST00000347617 DOK4Q8TEW6 326 aa14.16□□□□□ -0.14
HMGA1-202ENST00000347617 CASTOR1Q8WTX7 329 aa14.16□□□□□ -0.14
HMGA1-202ENST00000347617 C14orf79Q96F83 325 aa14.16□□□□□ -0.14
HMGA1-202ENST00000347617 TMEM74BQ9NUR3 256 aa14.16□□□□□ -0.14
HMGA1-202ENST00000347617 SOHLH2Q9NX45 425 aa14.16□□□□□ -0.14
HMGA1-202ENST00000347617 KCNG2Q9UJ96 466 aa14.16□□□□□ -0.14
HMGA1-202ENST00000347617 TNRC6BQ9UPQ9 1833 aaKnown RBP14.15□□□□□ -0.14
HMGA1-202ENST00000347617 C13orf42A0A1B0GVH6 325 aa14.15□□□□□ -0.14
HMGA1-202ENST00000347617 H3BMH7 237 aa14.15□□□□□ -0.14
HMGA1-202ENST00000347617 F12P00748 615 aaPredicted RBP14.15□□□□□ -0.14
HMGA1-202ENST00000347617 GAPDHP04406 335 aaKnown RBP14.15□□□□□ -0.14
HMGA1-202ENST00000347617 FCGR3AP08637 254 aa14.15□□□□□ -0.14
HMGA1-202ENST00000347617 PRF1P14222 555 aa14.15□□□□□ -0.14
HMGA1-202ENST00000347617 EIF2S3P41091 472 aaKnown RBP14.15□□□□□ -0.14
HMGA1-202ENST00000347617 HSD17B7P56937 341 aa14.15□□□□□ -0.14
HMGA1-202ENST00000347617 SSTP61278 116 aa14.15□□□□□ -0.14
HMGA1-202ENST00000347617 FAM189A2Q15884 450 aa14.15□□□□□ -0.14
HMGA1-202ENST00000347617 DEFB110Q30KQ9 67 aa14.15□□□□□ -0.14
HMGA1-202ENST00000347617 CD163Q86VB7 1156 aa14.15□□□□□ -0.14
HMGA1-202ENST00000347617 MAML2Q8IZL2 1156 aaPredicted RBP14.15□□□□□ -0.14
HMGA1-202ENST00000347617 SNIP1Q8TAD8 396 aaKnown RBP14.15□□□□□ -0.14
HMGA1-202ENST00000347617 MRGPRFQ96AM1 343 aa14.15□□□□□ -0.14
HMGA1-202ENST00000347617 KIRREL1Q96J84 757 aa14.15□□□□□ -0.14
HMGA1-202ENST00000347617 SULT4A1Q9BR01 284 aa14.15□□□□□ -0.14
HMGA1-202ENST00000347617 OCSTAMPQ9BR26 566 aa14.15□□□□□ -0.14
HMGA1-202ENST00000347617 HRH4Q9H3N8 390 aa14.15□□□□□ -0.14
HMGA1-202ENST00000347617 TMPRSS5Q9H3S3 457 aa14.15□□□□□ -0.14
HMGA1-202ENST00000347617 TMEM231Q9H6L2 316 aa14.15□□□□□ -0.14
HMGA1-202ENST00000347617 PPP4R1LQ9P1A2 415 aa14.15□□□□□ -0.14
HMGA1-202ENST00000347617 GTF2A1LQ9UNN4 478 aa14.15□□□□□ -0.14
HMGA1-202ENST00000347617 PCDHGA1Q9Y5H4 931 aa14.15□□□□□ -0.14
HMGA1-202ENST00000347617 MRPS18BQ9Y676 258 aaKnown RBP14.15□□□□□ -0.14
HMGA1-202ENST00000347617 MPDZO75970 2070 aa14.15□□□□□ -0.14
HMGA1-202ENST00000347617 CACNA1EQ15878 2313 aa14.15□□□□□ -0.14
HMGA1-202ENST00000347617 A0A0A6YYC8 382 aaPredicted RBP14.14□□□□□ -0.15
HMGA1-202ENST00000347617 I3L1I5 382 aaPredicted RBP14.14□□□□□ -0.15
HMGA1-202ENST00000347617 OR6A2O95222 327 aa14.14□□□□□ -0.15
HMGA1-202ENST00000347617 SFT2D2O95562 160 aa14.14□□□□□ -0.15
HMGA1-202ENST00000347617 PDGFBP01127 241 aaPredicted RBP14.14□□□□□ -0.15
HMGA1-202ENST00000347617 CSTBP04080 98 aaKnown RBP14.14□□□□□ -0.15
HMGA1-202ENST00000347617 AKR1C4P17516 323 aa14.14□□□□□ -0.15
HMGA1-202ENST00000347617 HSD11B1P28845 292 aa14.14□□□□□ -0.15
HMGA1-202ENST00000347617 HAAOP46952 286 aa14.14□□□□□ -0.15
HMGA1-202ENST00000347617 BTG2P78543 158 aa14.14□□□□□ -0.15
HMGA1-202ENST00000347617 ODF4Q2M2E3 257 aa14.14□□□□□ -0.15
HMGA1-202ENST00000347617 CORO6Q6QEF8 472 aa14.14□□□□□ -0.15
HMGA1-202ENST00000347617 LYPD6Q86Y78 171 aa14.14□□□□□ -0.15
HMGA1-202ENST00000347617 SLC22A8Q8TCC7 542 aa14.14□□□□□ -0.15
HMGA1-202ENST00000347617 SAP25Q8TEE9 199 aa14.14□□□□□ -0.15
HMGA1-202ENST00000347617 INTS12Q96CB8 462 aaKnown RBP14.14□□□□□ -0.15
HMGA1-202ENST00000347617 MOGAT1Q96PD6 335 aa14.14□□□□□ -0.15
HMGA1-202ENST00000347617 SLC5A7Q9GZV3 580 aa14.14□□□□□ -0.15
HMGA1-202ENST00000347617 CAPN10Q9HC96 672 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms