RNA–Protein interactions for RNA: ENST00000345617.7

HDAC4-201, Transcript of histone deacetylase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC4, Length 8,976 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-201ENST00000345617 HOXC11O43248 304 aaPredicted RBP17.67■□□□□ 0.42
HDAC4-201ENST00000345617 RAD52P43351 418 aa17.67■□□□□ 0.42
HDAC4-201ENST00000345617 MFSD12Q6NUT3 480 aa17.67■□□□□ 0.42
HDAC4-201ENST00000345617 CTU1Q7Z7A3 348 aaKnown RBP17.67■□□□□ 0.42
HDAC4-201ENST00000345617 BCL2L2Q92843 193 aaPredicted RBP17.67■□□□□ 0.42
HDAC4-201ENST00000345617 CSNK1G1Q9HCP0 422 aa17.67■□□□□ 0.42
HDAC4-201ENST00000345617 CHST11Q9NPF2 352 aa17.67■□□□□ 0.42
HDAC4-201ENST00000345617 COL11A1P12107 1806 aaPredicted RBP17.67■□□□□ 0.42
HDAC4-201ENST00000345617 TNRC6CQ9HCJ0 1690 aaKnown RBP17.67■□□□□ 0.42
HDAC4-201ENST00000345617 AQP6Q13520 282 aa17.67■□□□□ 0.42
HDAC4-201ENST00000345617 ZNF66Q6ZN08 573 aa17.67■□□□□ 0.42
HDAC4-201ENST00000345617 SLCO4A1Q96BD0 722 aa17.67■□□□□ 0.42
HDAC4-201ENST00000345617 MS4A10Q96PG2 267 aa17.67■□□□□ 0.42
HDAC4-201ENST00000345617 DCAF16Q9NXF7 216 aa17.67■□□□□ 0.42
HDAC4-201ENST00000345617 RALYQ9UKM9 306 aaKnown RBP17.67■□□□□ 0.42
HDAC4-201ENST00000345617 LAMTOR5O43504 91 aa17.67■□□□□ 0.42
HDAC4-201ENST00000345617 OR4S1Q8NGB4 309 aa17.67■□□□□ 0.42
HDAC4-201ENST00000345617 TEAD3Q99594 435 aa17.67■□□□□ 0.42
HDAC4-201ENST00000345617 CREBZFQ9NS37 354 aa17.67■□□□□ 0.42
HDAC4-201ENST00000345617 OR52A4PA6NMU1 304 aa17.67■□□□□ 0.42
HDAC4-201ENST00000345617 C19orf43Q9BQ61 176 aa17.67■□□□□ 0.42
HDAC4-201ENST00000345617 HDAC8Q9BY41 377 aa17.67■□□□□ 0.42
HDAC4-201ENST00000345617 ULBP3Q9BZM4 244 aa17.67■□□□□ 0.42
HDAC4-201ENST00000345617 SLCO1B1Q9Y6L6 691 aa17.67■□□□□ 0.42
HDAC4-201ENST00000345617 EP300Q09472 2414 aaPredicted RBP17.66■□□□□ 0.42
HDAC4-201ENST00000345617 SPANXN5Q5MJ07 72 aa17.66■□□□□ 0.42
HDAC4-201ENST00000345617 ZNF761Q86XN6 746 aaPredicted RBP17.66■□□□□ 0.42
HDAC4-201ENST00000345617 ACER3Q9NUN7 267 aa17.66■□□□□ 0.42
HDAC4-201ENST00000345617 TAS2R4Q9NYW5 299 aa17.66■□□□□ 0.42
HDAC4-201ENST00000345617 A0A087X0M5 115 aa17.66■□□□□ 0.42
HDAC4-201ENST00000345617 IGKV6D-21A0A0A0MT36 114 aa17.66■□□□□ 0.42
HDAC4-201ENST00000345617 A0A1B0GX30 115 aa17.66■□□□□ 0.42
HDAC4-201ENST00000345617 EXTL1Q92935 676 aa17.66■□□□□ 0.42
HDAC4-201ENST00000345617 USP54Q70EL1 1684 aa17.66■□□□□ 0.42
HDAC4-201ENST00000345617 SNAI1O95863 264 aaPredicted RBP17.66■□□□□ 0.42
HDAC4-201ENST00000345617 SOX4Q06945 474 aaPredicted RBP17.66■□□□□ 0.42
HDAC4-201ENST00000345617 LIPIQ6XZB0 460 aa17.66■□□□□ 0.42
HDAC4-201ENST00000345617 MAML2Q8IZL2 1156 aaPredicted RBP17.66■□□□□ 0.42
HDAC4-201ENST00000345617 PLA2G12AQ9BZM1 189 aa17.66■□□□□ 0.42
HDAC4-201ENST00000345617 VWA1Q6PCB0 445 aa17.66■□□□□ 0.42
HDAC4-201ENST00000345617 TAAR2Q9P1P5 351 aa17.66■□□□□ 0.42
HDAC4-201ENST00000345617 LHX3Q9UBR4 397 aa17.66■□□□□ 0.42
HDAC4-201ENST00000345617 RPA2P15927 270 aa17.66■□□□□ 0.42
HDAC4-201ENST00000345617 VWA2Q5GFL6 755 aa17.66■□□□□ 0.42
HDAC4-201ENST00000345617 DRAM2Q6UX65 266 aa17.66■□□□□ 0.42
HDAC4-201ENST00000345617 CHST6Q9GZX3 395 aa17.66■□□□□ 0.42
HDAC4-201ENST00000345617 HSPB8Q9UJY1 196 aa17.66■□□□□ 0.42
HDAC4-201ENST00000345617 KCND3Q9UK17 655 aa17.66■□□□□ 0.42
HDAC4-201ENST00000345617 COPS9Q8WXC6 57 aa17.65■□□□□ 0.42
HDAC4-201ENST00000345617 TIMD4Q96H15 378 aa17.65■□□□□ 0.42
HDAC4-201ENST00000345617 SMDT1Q9H4I9 107 aa17.65■□□□□ 0.42
HDAC4-201ENST00000345617 CXorf36Q9H7Y0 433 aa17.65■□□□□ 0.42
HDAC4-201ENST00000345617 GBF1Q92538 1859 aa17.65■□□□□ 0.42
HDAC4-201ENST00000345617 LRP3O75074 770 aa17.65■□□□□ 0.42
HDAC4-201ENST00000345617 TMEM229BQ8NBD8 167 aa17.65■□□□□ 0.42
HDAC4-201ENST00000345617 SMIM12Q96EX1 92 aa17.65■□□□□ 0.42
HDAC4-201ENST00000345617 FOXN4Q96NZ1 517 aa17.65■□□□□ 0.42
HDAC4-201ENST00000345617 COX20Q5RI15 118 aa17.65■□□□□ 0.42
HDAC4-201ENST00000345617 B3GNTL1Q67FW5 361 aaPredicted RBP17.65■□□□□ 0.42
HDAC4-201ENST00000345617 DEFB119Q8N690 84 aa17.65■□□□□ 0.42
HDAC4-201ENST00000345617 OR51H1Q8NH63 302 aa17.65■□□□□ 0.42
HDAC4-201ENST00000345617 PSENENQ9NZ42 101 aa17.65■□□□□ 0.42
HDAC4-201ENST00000345617 H7C1C5 153 aa17.65■□□□□ 0.42
HDAC4-201ENST00000345617 XRCC2O43543 280 aa17.65■□□□□ 0.42
HDAC4-201ENST00000345617 PKIAP61925 76 aa17.65■□□□□ 0.42
HDAC4-201ENST00000345617 DLEU7Q6UYE1 221 aa17.65■□□□□ 0.42
HDAC4-201ENST00000345617 TMED3Q9Y3Q3 217 aa17.65■□□□□ 0.42
HDAC4-201ENST00000345617 CHST2Q9Y4C5 530 aa17.65■□□□□ 0.42
HDAC4-201ENST00000345617 IQCF3P0C7M6 154 aa17.65■□□□□ 0.42
HDAC4-201ENST00000345617 RXFP4Q8TDU9 374 aa17.65■□□□□ 0.42
HDAC4-201ENST00000345617 NXPE3Q969Y0 559 aa17.65■□□□□ 0.42
HDAC4-201ENST00000345617 ANKRD61A6NGH8 418 aa17.65■□□□□ 0.42
HDAC4-201ENST00000345617 DCAF12Q5T6F0 453 aa17.65■□□□□ 0.42
HDAC4-201ENST00000345617 OR10C1Q96KK4 312 aa17.65■□□□□ 0.42
HDAC4-201ENST00000345617 R4GMQ9 66 aa17.65■□□□□ 0.42
HDAC4-201ENST00000345617 CLEC18AA5D8T8 446 aa17.64■□□□□ 0.42
HDAC4-201ENST00000345617 TLCD2A6NGC4 264 aa17.64■□□□□ 0.42
HDAC4-201ENST00000345617 SULT1A3P0DMM9 295 aa17.64■□□□□ 0.42
HDAC4-201ENST00000345617 SULT1A4P0DMN0 295 aa17.64■□□□□ 0.42
HDAC4-201ENST00000345617 TRMT12Q53H54 448 aaKnown RBP17.64■□□□□ 0.42
HDAC4-201ENST00000345617 LCN15Q6UWW0 184 aa17.64■□□□□ 0.42
HDAC4-201ENST00000345617 TMEM25Q86YD3 366 aa17.64■□□□□ 0.42
HDAC4-201ENST00000345617 Q8IYB0 196 aa17.64■□□□□ 0.42
HDAC4-201ENST00000345617 CLEC18CQ8NCF0 446 aa17.64■□□□□ 0.42
HDAC4-201ENST00000345617 NARFLQ9H6Q4 476 aa17.64■□□□□ 0.42
HDAC4-201ENST00000345617 MRPL22Q9NWU5 206 aaKnown RBP17.64■□□□□ 0.42
HDAC4-201ENST00000345617 NQO2P16083 231 aa17.64■□□□□ 0.41
HDAC4-201ENST00000345617 MMP11P24347 488 aa17.64■□□□□ 0.41
HDAC4-201ENST00000345617 ETFDHQ16134 617 aa17.64■□□□□ 0.41
HDAC4-201ENST00000345617 FAM71CQ8NEG0 241 aa17.64■□□□□ 0.41
HDAC4-201ENST00000345617 OR4C16Q8NGL9 310 aa17.64■□□□□ 0.41
HDAC4-201ENST00000345617 RGPD3A6NKT7 1758 aaPredicted RBP17.64■□□□□ 0.41
HDAC4-201ENST00000345617 RGPD4Q7Z3J3 1758 aa17.64■□□□□ 0.41
HDAC4-201ENST00000345617 CLDN34H7C241 214 aa17.64■□□□□ 0.41
HDAC4-201ENST00000345617 EPXP11678 715 aa17.64■□□□□ 0.41
HDAC4-201ENST00000345617 GPM6AP51674 278 aa17.64■□□□□ 0.41
HDAC4-201ENST00000345617 OR4D10Q8NGI6 311 aa17.64■□□□□ 0.41
HDAC4-201ENST00000345617 PARP12Q9H0J9 701 aaKnown RBP17.64■□□□□ 0.41
HDAC4-201ENST00000345617 COX7A2P2O60397 106 aa17.64■□□□□ 0.41
HDAC4-201ENST00000345617 CTSAP10619 480 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms