RNA–Protein interactions for RNA: ENST00000338427.10

NUDCD3-201, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-201ENST00000338427 LNX2Q8N448 690 aa11.16□□□□□ -0.62
NUDCD3-201ENST00000338427 C3orf56Q8N813 242 aa11.16□□□□□ -0.62
NUDCD3-201ENST00000338427 SPRYD4Q8WW59 207 aaPredicted RBP11.16□□□□□ -0.62
NUDCD3-201ENST00000338427 POP5Q969H6 163 aaKnown RBP11.16□□□□□ -0.62
NUDCD3-201ENST00000338427 ZNF799Q96GE5 643 aa11.16□□□□□ -0.62
NUDCD3-201ENST00000338427 CCT8L2Q96SF2 557 aa11.16□□□□□ -0.62
NUDCD3-201ENST00000338427 SSBP3Q9BWW4 388 aaPredicted RBP11.16□□□□□ -0.62
NUDCD3-201ENST00000338427 TRIM15Q9C019 465 aa11.16□□□□□ -0.62
NUDCD3-201ENST00000338427 MDFIC2A0A1B0GVS7 189 aa11.15□□□□□ -0.62
NUDCD3-201ENST00000338427 FAM183AA6NL82 134 aa11.15□□□□□ -0.62
NUDCD3-201ENST00000338427 A8MXK9 166 aa11.15□□□□□ -0.62
NUDCD3-201ENST00000338427 DCTN3O75935 186 aa11.15□□□□□ -0.62
NUDCD3-201ENST00000338427 GRPP07492 148 aa11.15□□□□□ -0.62
NUDCD3-201ENST00000338427 SPARCP09486 303 aa11.15□□□□□ -0.62
NUDCD3-201ENST00000338427 MAGEA2P43356 314 aa11.15□□□□□ -0.62
NUDCD3-201ENST00000338427 COMPP49747 757 aaPredicted RBP11.15□□□□□ -0.62
NUDCD3-201ENST00000338427 RAD23AP54725 363 aa11.15□□□□□ -0.62
NUDCD3-201ENST00000338427 GNB2P62879 340 aa11.15□□□□□ -0.62
NUDCD3-201ENST00000338427 MALLQ13021 153 aa11.15□□□□□ -0.62
NUDCD3-201ENST00000338427 OR8G1Q15617 311 aa11.15□□□□□ -0.62
NUDCD3-201ENST00000338427 ZNF404Q494X3 552 aa11.15□□□□□ -0.62
NUDCD3-201ENST00000338427 AWAT1Q58HT5 328 aa11.15□□□□□ -0.62
NUDCD3-201ENST00000338427 ZNF841Q6ZN19 808 aa11.15□□□□□ -0.62
NUDCD3-201ENST00000338427 MRPL21Q7Z2W9 205 aaKnown RBP11.15□□□□□ -0.62
NUDCD3-201ENST00000338427 TMEM179BQ7Z7N9 219 aa11.15□□□□□ -0.62
NUDCD3-201ENST00000338427 MUC20Q8N307 709 aaPredicted RBP11.15□□□□□ -0.62
NUDCD3-201ENST00000338427 TEX29Q8N6K0 151 aa11.15□□□□□ -0.62
NUDCD3-201ENST00000338427 IQCF1Q8N6M8 205 aa11.15□□□□□ -0.62
NUDCD3-201ENST00000338427 OR52L1Q8NGH7 329 aa11.15□□□□□ -0.62
NUDCD3-201ENST00000338427 OR2T4Q8NH00 348 aa11.15□□□□□ -0.62
NUDCD3-201ENST00000338427 RAB40AQ8WXH6 277 aa11.15□□□□□ -0.62
NUDCD3-201ENST00000338427 NEIL1Q96FI4 390 aaPredicted RBP11.15□□□□□ -0.62
NUDCD3-201ENST00000338427 NIPSNAP1Q9BPW8 284 aa11.15□□□□□ -0.62
NUDCD3-201ENST00000338427 MRI1Q9BV20 369 aa11.15□□□□□ -0.62
NUDCD3-201ENST00000338427 RBM4Q9BWF3 364 aaKnown RBP11.15□□□□□ -0.62
NUDCD3-201ENST00000338427 NMNAT2Q9BZQ4 307 aa11.15□□□□□ -0.62
NUDCD3-201ENST00000338427 DDX28Q9NUL7 540 aaKnown RBP11.15□□□□□ -0.62
NUDCD3-201ENST00000338427 TBC1D23Q9NUY8 699 aa11.15□□□□□ -0.62
NUDCD3-201ENST00000338427 TAS2R1Q9NYW7 299 aa11.15□□□□□ -0.62
NUDCD3-201ENST00000338427 MIOXQ9UGB7 285 aa11.15□□□□□ -0.62
NUDCD3-201ENST00000338427 OR5V1Q9UGF6 321 aa11.15□□□□□ -0.62
NUDCD3-201ENST00000338427 KIR2DS1A0A191URI9 304 aa11.14□□□□□ -0.63
NUDCD3-201ENST00000338427 GGT3PA6NGU5 568 aa11.14□□□□□ -0.63
NUDCD3-201ENST00000338427 FCN3O75636 299 aa11.14□□□□□ -0.63
NUDCD3-201ENST00000338427 SPI1P17947 270 aa11.14□□□□□ -0.63
NUDCD3-201ENST00000338427 FMO3P31513 532 aa11.14□□□□□ -0.63
NUDCD3-201ENST00000338427 CD200P41217 278 aa11.14□□□□□ -0.63
NUDCD3-201ENST00000338427 BAMBIQ13145 260 aa11.14□□□□□ -0.63
NUDCD3-201ENST00000338427 TAF13Q15543 124 aa11.14□□□□□ -0.63
NUDCD3-201ENST00000338427 MICAQ29983 383 aa11.14□□□□□ -0.63
NUDCD3-201ENST00000338427 WDR25Q64LD2 544 aaPredicted RBP11.14□□□□□ -0.63
NUDCD3-201ENST00000338427 OR2T5Q6IEZ7 315 aa11.14□□□□□ -0.63
NUDCD3-201ENST00000338427 DOK3Q7L591 496 aa11.14□□□□□ -0.63
NUDCD3-201ENST00000338427 DHFR2Q86XF0 187 aa11.14□□□□□ -0.63
NUDCD3-201ENST00000338427 OR2T29Q8NH02 315 aa11.14□□□□□ -0.63
NUDCD3-201ENST00000338427 SPTSSAQ969W0 71 aa11.14□□□□□ -0.63
NUDCD3-201ENST00000338427 DACT3Q96B18 629 aaPredicted RBP11.14□□□□□ -0.63
NUDCD3-201ENST00000338427 SGK3Q96BR1 496 aa11.14□□□□□ -0.63
NUDCD3-201ENST00000338427 SLAMF6Q96DU3 332 aa11.14□□□□□ -0.63
NUDCD3-201ENST00000338427 JMJD8Q96S16 334 aa11.14□□□□□ -0.63
NUDCD3-201ENST00000338427 AMELYQ99218 206 aa11.14□□□□□ -0.63
NUDCD3-201ENST00000338427 MS4A7Q9GZW8 240 aaPredicted RBP11.14□□□□□ -0.63
NUDCD3-201ENST00000338427 ZNF319Q9P2F9 582 aa11.14□□□□□ -0.63
NUDCD3-201ENST00000338427 SAMHD1Q9Y3Z3 626 aaKnown RBP11.14□□□□□ -0.63
NUDCD3-201ENST00000338427 PCDHGB1Q9Y5G3 927 aa11.14□□□□□ -0.63
NUDCD3-201ENST00000338427 COMMD3-BMI1R4GMX3 469 aa11.14□□□□□ -0.63
NUDCD3-201ENST00000338427 IGHV2-70DA0A0C4DH43 119 aa11.13□□□□□ -0.63
NUDCD3-201ENST00000338427 DNAJC9-AS1A6NH13 148 aa11.13□□□□□ -0.63
NUDCD3-201ENST00000338427 LRRC30A6NM36 301 aa11.13□□□□□ -0.63
NUDCD3-201ENST00000338427 C22orf46C9J442 243 aa11.13□□□□□ -0.63
NUDCD3-201ENST00000338427 IFNL4K9M1U5 179 aa11.13□□□□□ -0.63
NUDCD3-201ENST00000338427 TNFRSF13BO14836 293 aaPredicted RBP11.13□□□□□ -0.63
NUDCD3-201ENST00000338427 OTX1P32242 354 aaPredicted RBP11.13□□□□□ -0.63
NUDCD3-201ENST00000338427 GATA4P43694 442 aa11.13□□□□□ -0.63
NUDCD3-201ENST00000338427 PITPNBP48739 271 aa11.13□□□□□ -0.63
NUDCD3-201ENST00000338427 ENTPD1P49961 510 aa11.13□□□□□ -0.63
NUDCD3-201ENST00000338427 TRIM25Q14258 630 aaKnown RBP11.13□□□□□ -0.63
NUDCD3-201ENST00000338427 ZNF181Q2M3W8 571 aa11.13□□□□□ -0.63
NUDCD3-201ENST00000338427 LINC01590Q5TEZ4 76 aa11.13□□□□□ -0.63
NUDCD3-201ENST00000338427 BRD3OSQ6XYD6 125 aa11.13□□□□□ -0.63
NUDCD3-201ENST00000338427 FGFRL1Q8N441 504 aa11.13□□□□□ -0.63
NUDCD3-201ENST00000338427 OR6K6Q8NGW6 343 aa11.13□□□□□ -0.63
NUDCD3-201ENST00000338427 OTULINQ96BN8 352 aa11.13□□□□□ -0.63
NUDCD3-201ENST00000338427 KCNJ15Q99712 375 aa11.13□□□□□ -0.63
NUDCD3-201ENST00000338427 NUDT16L1Q9BRJ7 211 aaKnown RBP11.13□□□□□ -0.63
NUDCD3-201ENST00000338427 COPS4Q9BT78 406 aa11.13□□□□□ -0.63
NUDCD3-201ENST00000338427 NTN4Q9HB63 628 aa11.13□□□□□ -0.63
NUDCD3-201ENST00000338427 TNFRSF19Q9NS68 423 aa11.13□□□□□ -0.63
NUDCD3-201ENST00000338427 C1orf123Q9NWV4 160 aa11.13□□□□□ -0.63
NUDCD3-201ENST00000338427 RNF7Q9UBF6 113 aa11.13□□□□□ -0.63
NUDCD3-201ENST00000338427 CTSZQ9UBR2 303 aa11.13□□□□□ -0.63
NUDCD3-201ENST00000338427 KCNG2Q9UJ96 466 aa11.13□□□□□ -0.63
NUDCD3-201ENST00000338427 LRCH1Q9Y2L9 728 aa11.13□□□□□ -0.63
NUDCD3-201ENST00000338427 IGHV3OR15-7A0A075B7D8 119 aa11.12□□□□□ -0.63
NUDCD3-201ENST00000338427 DHRS12A0PJE2 317 aa11.12□□□□□ -0.63
NUDCD3-201ENST00000338427 TBX1O43435 398 aa11.12□□□□□ -0.63
NUDCD3-201ENST00000338427 IRF2P14316 349 aa11.12□□□□□ -0.63
NUDCD3-201ENST00000338427 PRKACGP22612 351 aa11.12□□□□□ -0.63
NUDCD3-201ENST00000338427 PRTN3P24158 256 aa11.12□□□□□ -0.63
NUDCD3-201ENST00000338427 FGF12P61328 243 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms